CCCCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCACATGAGGAATATCGAATGCCTGAGAAGCACCTGAAAAAATG
TTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT
TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAGTTCAGGTGACAGC
AGATGCTGGCGAGGATGTGGAGAAAGAGGAACATTCCTCCATTGCTGGTG
GGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGACGGTTCCTCA
GAAAATTGGACATAGTTCTACCAGAGGATCTCGAAATACCTCTCCTGGGC
ATATATCCAGGAAGATGTTCCAACTGGTAAAAAAGACACATGCTCCACTA
TGTTCATAGAAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGA
TGTCCCTCAACAGAAGAATGGATACAGAAAATGTGGTGCATTTACACAAT
GGAGTACAACTCAGCTATTAAAAACAATGAATTTATAAAATTCCTAGGTA
AATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAA
AAGAACTCACATGATATGTACTCACTGATAAGTGGATATTAGCCCAGAAA
CCTAGAATACCCAAGATACAAGATACAATTTGCAAAACACATGAAACTCA
AGAAGAATAAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGG
AACAAAACACCATGGAAAGAGTTACAAAGTTTGGAGC

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTAATTTGGAGTTTTTTTTCTCTTTT
TGTTGTTGTTGTTGAGGTGCTTCAGATCAAACCTAGGACCTTGTATTGGG
AATAAAAGAAAAACCAAAATGTTCCGTAATGACCCCAACCTTGACTTGTT
TGAGTTACATTTTAAAATTCTTTCATAGTAATAGTTTTTCAATCTTTGAT
TTTGCTTCTTAGGTTATTGAATTAGTTCAGAAATATGGGCCAAAAAGGTG
GTCTTTAATTGCAAAACATTTAAAAGGAAGAATAGGCAAGCAGTGCAGAG
AAAGATGGCACAATCACCTGAACCCTGAAGTGAAGAAGTCTTCCTGGACA
GAAGAAGAAGACAGGATCATATATGAAGCACACAAGCGCCTGGGAAACCG
TTGGGCCGAGATTGCTAAGTTACTTCCTGGAAGGTGCTTACATAAATAAG
TTTCTGTGCTTCAACATGACCTTGACTACCTTACTATTGAATATATTTTC
AAGTATTTCCTTTCTATTATTCACAATTCAAGTTTAGTCTGCATGCTATG
AGCAACCATTTGGGTACATTTGTAATTTTGTGGTAAAGAATATAATTTGT
ACAATAAAATGGTAAAACCTTTAAGCTTTGCAAACATTTCATCTACTCCA
CAAGTCATGTTTATGTGTTATTGCTGGTAAGGCAGAACTTGTACAGCTGG
TGGAGTGATATCTAAATTAGAGATCTC

Query= MSMg01no543_i20.g1 MSMg01no543_i20.g1 CHROMAT_FILE:
MSMg01no543_i20.g1 PHD_FILE: MSMg01no543_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:58 2005
         (652 letters)



>mm_chr1_9677199_9678250
          Length = 1052

 Score = 1261 bits (652), Expect = 0.0
 Identities = 652/652 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttaatttggagttttttttctctttttgttgttgttgttgaggtgcttcagatcaaacct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 ttaatttggagttttttttctctttttgttgttgttgttgaggtgcttcagatcaaacct 793

                                                                       
Query: 61  aggaccttgtattgggaataaaagaaaaaccaaaatgttccgtaatgaccccaaccttga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 aggaccttgtattgggaataaaagaaaaaccaaaatgttccgtaatgaccccaaccttga 733

                                                                       
Query: 121 cttgtttgagttacattttaaaattctttcatagtaatagtttttcaatctttgattttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 cttgtttgagttacattttaaaattctttcatagtaatagtttttcaatctttgattttg 673

                                                                       
Query: 181 cttcttaggttattgaattagttcagaaatatgggccaaaaaggtggtctttaattgcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 cttcttaggttattgaattagttcagaaatatgggccaaaaaggtggtctttaattgcaa 613

                                                                       
Query: 241 aacatttaaaaggaagaataggcaagcagtgcagagaaagatggcacaatcacctgaacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aacatttaaaaggaagaataggcaagcagtgcagagaaagatggcacaatcacctgaacc 553

                                                                       
Query: 301 ctgaagtgaagaagtcttcctggacagaagaagaagacaggatcatatatgaagcacaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ctgaagtgaagaagtcttcctggacagaagaagaagacaggatcatatatgaagcacaca 493

                                                                       
Query: 361 agcgcctgggaaaccgttgggccgagattgctaagttacttcctggaaggtgcttacata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 agcgcctgggaaaccgttgggccgagattgctaagttacttcctggaaggtgcttacata 433

                                                                       
Query: 421 aataagtttctgtgcttcaacatgaccttgactaccttactattgaatatattttcaagt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aataagtttctgtgcttcaacatgaccttgactaccttactattgaatatattttcaagt 373

                                                                       
Query: 481 atttcctttctattattcacaattcaagtttagtctgcatgctatgagcaaccatttggg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 atttcctttctattattcacaattcaagtttagtctgcatgctatgagcaaccatttggg 313

                                                                       
Query: 541 tacatttgtaattttgtggtaaagaatataatttgtacaataaaatggtaaaacctttaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tacatttgtaattttgtggtaaagaatataatttgtacaataaaatggtaaaacctttaa 253

                                                               
Query: 601 gctttgcaaacatttcatctactccacaagtcatgtttatgtgttattgctg 652
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gctttgcaaacatttcatctactccacaagtcatgtttatgtgttattgctg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space:   668964
Effective search space used:   668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)