GCGGGCGCTATCGACTCACTATTCCGAGAGGATCCGCGGAATTCACTCCT
AGAGAATGCATGGTAGAAGGAGATAACTGACTCTTGCCCCTATGCACTGT
GGCATGCATGCATGCATGCATACAAAATAAATAGAAGACCAAAACCTGAA
AAAGAAAAAAAAAACTTTGTTGTCCAGGGTAGCATTTTTGGGAGGTGGCA
GAACCTTTAAAGGTGGGGTCTAATGGGATGTCTTTGGGGCACTGAGGGCT
TCCTCTTAAAGGATACTAAGGGACCCCAACTCTTCCCTCTTTATTTCAGT
TTCTGGTCATGAGGTCAGCAGTCTACTCCACCCTGTGACCCCTGCTTTTG
CCACTTTGCCCACCCAGTGGAAGCCTGAACAATGGGTATGCCAGATTGAG
GGATGGAAGCTCCAAAACTATGTCTCCAAATTAACCCTTTTGTCAAATAA
GTTATTACGCCAAGTAGTTGGGTATAGTAACTCAAATGCTAGCACAACTG
TGGACGTTAAGAAACCATTATACTATCCTACCACAGCAGGCAAAACTGTC
GAGATGTCTTATGACCTAGCTCCAAAACACATGTTTGTGGAGAAGAGTGA
AGGCTATTCAGTCAGCTCCTTGGCATGAGGCAATGAGTGAATGCTTCGTT
TCTTTCTCTAACTGGCTTCAGGCTGCCTCGTCTGTGTCCATATAGTCACC
TGTGTGGCTTTCCAGTAGACAATAGGCTTAAAGGCAGTN

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTTATCATGAATGGGTGTT
GAATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGATCATGTGGTTT
TTGTCTTTGAGGTTGTTTATATAATGGATTACATTGATGGATTTTCGTAT
ATTAAACCATCCCTGCATTCCTGGAATAAAACCTACTTGGTCAGGATGGA
TGATTGCTTTAATATGTTCTTGGATTCGGTTAGCAAGAATTTTATTGAGG
ATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAGTTCTCTATCTT
TGTTGAATCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAA
ATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTGTGAAATAGTTTGTGC
AGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAA
CCCATCTGGTCCTGGGCTTTTTTTGGCTGGGAGACTATTAATAACTGCTT
CTATTTCTTTAGGTGATATGGGACTGTTTAGATGGTCAACTTGATCCTGA
CAGCTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCATTTCGTCCAGGT
TTTCCAGTTTTGTTGAGTATAACCTTTTGTAGAAGGATCTGATGGCGTTT
TGGATTTCTTCAAGATCTGTTGGTATGTCTCCCTT

Query= MSMg01no545_h16.b1 MSMg01no545_h16.b1 CHROMAT_FILE:
MSMg01no545_h16.b1 PHD_FILE: MSMg01no545_h16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:27 2005
         (559 letters)



>mm_chr1_107765049_107766009
          Length = 961

 Score = 1038 bits (537), Expect = 0.0
 Identities = 550/555 (99%), Gaps = 3/555 (0%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaattcactcctagaga-atgcatggtagaaggagataactgactcttgcccctatgcac 66
           |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcactcctggagacatgcatggtagaaggagataactgactcttgcccctatgcac 266

                                                                       
Query: 67  tgtggcatgcatgcatgcatgcatacaaaataaatagaagaccaaaacctgaaaaag--a 124
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 267 tgtggcatgcatgcatgcatgcatacaaaataaatagaagaccaaaacctgaaaaagaaa 326

                                                                       
Query: 125 aaaaaaaaactttgttgtccagggtagcatttttgggaggtggcagaacctttaaaggtg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aaaaaaaaactttgttgtccagggtagcatttttgggaggtggcagaacctttaaaggtg 386

                                                                       
Query: 185 gggtctaatgggatgtctttggggcactgagggcttcctcttaaaggatactaagggacc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gggtctaatgggatgtctttggggcactgagggcttcctcttaaaggatactaagggacc 446

                                                                       
Query: 245 ccaactcttccctctttatttcagtttctggtcatgaggtcagcagtctactccaccctg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ccaactcttccctctttatttcagtttctggtcatgaggtcagcagtctactccaccctg 506

                                                                       
Query: 305 tgacccctgcttttgccactttgcccacccagtggaagcctgaacaatgggtatgccaga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tgacccctgcttttgccactttgcccacccagtggaagcctgaacaatgggtatgccaga 566

                                                                       
Query: 365 ttgagggatggaagctccaaaactatgtctccaaattaacccttttgtcaaataagttat 424
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 567 ttgagggatggaagctccaaaactatgtctccaaattaacccttttgtcacataagttat 626

                                                                       
Query: 425 tacgccaagtagttgggtatagtaactcaaatgctagcacaactgtggacgttaagaaac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tacgccaagtagttgggtatagtaactcaaatgctagcacaactgtggacgttaagaaac 686

                                                                       
Query: 485 cattatactatcctaccacagcaggcaaaactgtcgagatgtcttatgacctagctccaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 cattatactatcctaccacagcaggcaaaactgtcgagatgtcttatgacctagctccaa 746

                          
Query: 545 aacacatgtttgtgg 559
           |||||||||||||||
Sbjct: 747 aacacatgtttgtgg 761


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 961
Length adjustment: 10
Effective length of query: 549
Effective length of database: 951
Effective search space:   522099
Effective search space used:   522099
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)