Query= MSMg01no545_n03.b1 MSMg01no545_n03.b1 CHROMAT_FILE:
MSMg01no545_n03.b1 PHD_FILE: MSMg01no545_n03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:54 2005
(416 letters)
>mm_chr1_168419322_168420137
Length = 816
Score = 795 bits (411), Expect = 0.0
Identities = 411/411 (100%)
Strand = Plus / Plus
Query: 4 ggaattctgatggtgaaattgtcctagccgacaacaggcttgagggttactgtgggatta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgatggtgaaattgtcctagccgacaacaggcttgagggttactgtgggatta 263
Query: 64 taaatttaaacctagaataagagtggagagcaggtgacaggtggtggcagaaggggtgag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taaatttaaacctagaataagagtggagagcaggtgacaggtggtggcagaaggggtgag 323
Query: 124 tggtggtgtgaattggcacagtgagaaaggagaagtaagaccggtgctggaacttaagac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggtggtgtgaattggcacagtgagaaaggagaagtaagaccggtgctggaacttaagac 383
Query: 184 cgcatcacctgtgtttacgccaaatgcagtcttttctacctcagtcgaatggctagaatg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cgcatcacctgtgtttacgccaaatgcagtcttttctacctcagtcgaatggctagaatg 443
Query: 244 cctagtcagcaggaaatgacgtcagcatttccaattagaataaattctattaagacttag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cctagtcagcaggaaatgacgtcagcatttccaattagaataaattctattaagacttag 503
Query: 304 aagaatgtcactcacctgccttatatattctctgattggtatagcattgttgttttgtat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aagaatgtcactcacctgccttatatattctctgattggtatagcattgttgttttgtat 563
Query: 364 gatagtttggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 414
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gatagtttggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_n03.g1 MSMg01no545_n03.g1 CHROMAT_FILE:
MSMg01no545_n03.g1 PHD_FILE: MSMg01no545_n03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:54 2005
(650 letters)
>mm_chr1_168571204_168572252
Length = 1049
Score = 1189 bits (615), Expect = 0.0
Identities = 643/657 (97%), Gaps = 11/657 (1%)
Strand = Plus / Minus
Query: 1 tacagggaaaaggaataaaatgtcctagagctcagactttgttctttgtttcctagacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 tacagggaaaaggaataaaatgtcctagagctcagactttgttctttgtttcctagacaa 694
Query: 61 acgtgtgcaatataaagaagcgccctgacttttcatcctctggtcaatgggatgtggtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 acgtgtgcaatataaagaagcgccctgacttttcatcctctggtcaatgggatgtggtag 634
Query: 121 tagagaccgaggagatgcagaaaacctacatatttgatgggataatggtttgcagtggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tagagaccgaggagatgcagaaaacctacatatttgatgggataatggtttgcagtggtc 574
Query: 181 actacactgagaagtactttcctttacaagactttgaaggtatctctctaatgtgtgtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 actacactgagaagtactttcctttacaagactttgaaggtatctctctaatgtgtgtgt 514
Query: 241 gagaaaaaacttaggatgctacatattttaatgcctctcctgtaataggcactggaagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gagaaaaaacttaggatgctacatattttaatgcctctcctgtaataggcactggaagac 454
Query: 301 agtgtttatacagaggagacacaagaggggggcattctaagttcatggaacagtcagggg 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 453 agtgtttatacagaggagacacaaga-gggggcattctaagttcatggaacagtcagggg 395
Query: 361 agatctggcaacagagataaagacagaacggaaaatcagaaatcctcagacaagtaaggt 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 394 agatctggcaacagagataaagacagaacggaaaatcagaaatcctcacacaagtaaggt 335
Query: 421 tgagacagactttcatggacgaggaagcagtggggagaagccagtagataggcaatcctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgagacagactttcatggacgaggaagcagtggggagaagccagtagataggcaatcctg 275
Query: 481 gagagagctcagggattggctcacacttggagtgcctaggttgggagaagcatgtaagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gagagagctcagggattggctcacacttggagtgcctaggttgggagaagcatgtaagag 215
Query: 541 ttaaaggcaaagcatctc------tctctgtctctctgtctctgtctctgtctctgtctc 594
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 214 ttaaaggcaaagcatctctctctgtctctgtctctctgtctctgtctctgtctctgtctc 155
Query: 595 tctg--tctctgtctctgtctctctctctctctggctctctctctctctctctctct 649
|||| ||||||||||| |||||||||||| || ||||||||||||||||||||||
Sbjct: 154 tctgtctctctgtctctctctctctctctccct--ctctctctctctctctctctct 100
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 83
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1049
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1039
Effective search space: 664960
Effective search space used: 664960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
