XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAA
AGACCATATCTCCACATAATAAGAGCAATATACAGCAAACCAGTAGCCAA
CATCAAACTAAATGGAGAGAAACTTGAAGCAATTCCACTAAAATCAGAGA
CTAAACATGGCTACCCACTTTCTCCCTACCTATTCAATATAGTACTCGAA
GTCCTAGCCAGAGCAATTAGACAACAAAAGGAGATCAAGTGGATACGAAT
TGAAAAGAAGGAAGCCAAAATATCACTATTTGCAGATGATATGATAGTAT
ATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAAACCTGATAAAC
AGCTTCAGTGCAGTAGCTGGATATAAAATTAAATCAAACAAATTAGTGGC
CTTTCTCTACACAGAGGATAAACAGGTTGAAAAAGAAATTAGGGAAACAA
CACCCTTCACAATAATCACAAACAATATAAAATACCTTGGTGTGACTCTA
AGCTATTGAAAAATCTGTATGATGAGAACTTCAAGTCTCTGAAGAAAGAA
ATCTAAGAAGATCTTAGAAGATAGAAAGATCTCTATGCTCATGAATTGGC
AGGATTAATATAGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATT
CAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCACTGAATTAGAAA
GGGCAATTTGCAAATTCATCTGGAATAACAAAAN

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTAATAGTCCTCCAAATTTTCTATCTTTGAGA
TTTTTTTCCTTCAATATATAGTATTTTTGAGCATGGTTCTGATACCATGT
TATATAGTTACAAAACTTTTGTATGAAATAATAAATGTATGAAAGTGGTA
AATAAAATGACAAGTTTAATACATTTGCATAAACATATTAGTTTTTATTG
GAATGCTGTATGTGGCCTATCTTTCCTGACATATGGAAAATGTAGTATAC
AGCTACTTCATTTTATTATTTGAGAAATGTTCTCTCTATGTACACTAGGT
TGACCTCCAATTCAGAGAGACAAGCCTACCTCTGTTTTCCAAATGCTGAG
ATTAAAAACATGTGCCACCATGCCTAGCCTATATGACTACTAATAAAGAA
AGCAGCTCATAATGAATGAGCTAATGAAGAAAACTTAGATGCCAAGTTAG
TTGCTGACACTTGAAGGATTCAAGAATGTTTGTGGTGTATATATGCATGC
AGATACTTATATGCCTACTAGATTTCTTTCAATGTATAGTGATACAGTTA
TTTTTATTACATTTTTTCCTGGACCATACGTTTCTGGAGTTGTGATCTCT
CTAAGATTATTCACTGGAAAATGATCAACTAGAAAAGTCCAATTTACATT
TTATTTTGTGTCTGGTTCTGTGTTTGTA

Query= MSMg01no546_i24.g1 MSMg01no546_i24.g1 CHROMAT_FILE:
MSMg01no546_i24.g1 PHD_FILE: MSMg01no546_i24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:54 2005
         (660 letters)



>mm_chr1_13699917_13700975
          Length = 1059

 Score = 1214 bits (628), Expect = 0.0
 Identities = 652/660 (98%), Gaps = 1/660 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttaatagtcctccaaattttctatctttgagatttttttccttcaatatatagtattttt 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaatagtcctccaaattttctatttttgagatttttttccttcaatatatagtattttt 260

                                                                       
Query: 61  gagcatggttctgataccatgttatatagttacaaaacttttgtatgaaataataaatgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagcatggttctgataccatgttatatagttacaaaacttttgtatgaaataataaatgt 320

                                                                       
Query: 121 atgaaagtggtaaataaaatgacaagtttaatacatttgcataaacatattagtttttat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgaaagtggtaaataaaatgacaagtttaatacatttgcataaacatattagtttttat 380

                                                                       
Query: 181 tggaatgctgtatgtggcctatctttcctgacatatggaaaatgtagtatacagctactt 240
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggaatgctgtatgtgacctatctttcctgacatatggaaaatgtagtatacagctactt 440

                                                                       
Query: 241 cattttattatttgagaaatgttctctctatgtacactaggttgacctccaattcagaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cattttattatttgagaaatgttctctctatgtacactaggttgacctccaattcagaga 500

                                                                       
Query: 301 gacaagcctacctctgttttccaaatgctgagattaaaaacatgtgccaccatgcctagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gacaagcctacctctgttttccaaatgctgagattaaaaacatgtgccaccatgcctagc 560

                                                                       
Query: 361 ctatatgactactaataaagaaagcagctcataatgaatgagctaatgaagaaaacttag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctatatgactactaataaagaaagcagctcataatgaatgagctaatgaagaaaacttag 620

                                                                       
Query: 421 atgccaagttagttgctgacacttgaaggattcaagaatgtttgtggtgtatatatgcat 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 621 atgccaagttagttgctgacacttgaaggattcaagaatgtttgtggtgtatgtatgcat 680

                                                                       
Query: 481 gcagatacttatatgcctactagatttctttcaatgtatagtgatacagttatttttatt 540
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 681 gcagatacttatatgcctactagatttctttcaatgtatagtgatagagttatttttatt 740

                                                                       
Query: 541 acattttttcctggaccatacgtttctggagttgtgatctctctaagattattcactgga 600
           | |||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 741 atattttt-cctggaccatatgtttctggagttgtggtctctctaagattattcactgga 799

                                                                       
Query: 601 aaatgatcaactagaaaagtccaatttacattttattttgtgtctggttctgtgtttgta 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aaatgatcaactagaaaagtccaatttacattttattttgtgtctggttctgtgtttgta 859


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1059
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1049
Effective search space:   681850
Effective search space used:   681850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)