XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCACC
TGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCT
TAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCTACCTTGCA
CCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCG
AGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGAGATTGCAGGC
TTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGAC
ATAGTACTACTGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGA
AGATGCCCCAACGGGTAAGAAAGACACATGCTCCACTATGTTCATAGCAG
CCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACA
GAGGAATGGATACAGAAAATGTGGTACATTTAAACAATGGAGTACTACTC
AGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGACC
TGGAATGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAACTCACAC
AATATGTACTCACTGATAAGTGGATATTAGCCCAAAACCTAGGATACCCA
AGATATAAGATACAATTTGCTAAACACATGANACTCAAGAAGAATGAAGA
CTAAAGTGTGGACACTATGCACCTCCTTAGAATTGGG

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXAGCTGAGCTACTTCCTGAGGAGACTCATCCATCTAA
TGGAGGGCTTCCTCCTTCAGCTGTCTGTCATTCTTTTATATATTTCCAAT
GTTGGTCCCTTAGAAATTCTTAAAGGAATTTACCCTCGAAAGAGGAGAAC
TTTAGAGAAATGACTACTCCCAACAGAGGTATGGAATAGAGAGGGGCCTG
GAGCATCTGCCAAGCCTGAAGGGAAGGGCTCAAAAATACAGCAAAGCAGT
GGGTGACCTCTTTGTTTCTGCCAGCTGATAAGGAGCTCATTAGCTACAAT
TTGTCAACTGCCTTGGGACTAGGTCCTTGACAATTTATGGTGCTCTGATA
GAGAGGTTACAATGATCAATGATGGCTCTGAGTGCCACCTGATAGTGCAT
AAGTTTGTAATACATTAATATAAATAAATATGCCTACATTATATGTATAT
GATGTATATACATATATGTATATGTATATCCCTATCTGGTTACACGTTCA
CAGATCCATTTGACCATATCCATTTATTCATCCTTCATTCATTTATCCTC
TACCCATTTATTTATCCATGCATCCATCTTCAATGCCCCTTCTTTTCCAC
ACTCTCCTGAATACAGTCTCTAAAAACTTGCTCTTGTTAATGTCAAATAC
GACCTCTACCATATTGAACTCAATAATCGACCTGTCTACATCTCTCT

Query= MSMg01no547_b09.g1 MSMg01no547_b09.g1 CHROMAT_FILE:
MSMg01no547_b09.g1 PHD_FILE: MSMg01no547_b09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:37 2005
         (598 letters)



>mm_chr1_18024028_18025022
          Length = 995

 Score = 1071 bits (554), Expect = 0.0
 Identities = 586/598 (97%), Gaps = 3/598 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gctacttcctgaggagactcatccatctaatggagggcttcctccttcagctgtctgtca 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 834 gctacttcctgaggagactcatccatctgatggagggcttcctccttcagctgtctgtca 775

                                                                       
Query: 61  ttcttttatatatttccaatgttggtcccttagaaattcttaaaggaatttaccctcgaa 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 774 ttcttttatatatttccaatgttggtcccttagaaattcttaaaggaatttatcctcaaa 715

                                                                       
Query: 121 agaggagaactttagagaaatgactactcccaacagaggtatggaatagagaggggcctg 180
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 714 agaggagaactttagagaaatgactactcccaacaaaggtatggaatagagaggggcctg 655

                                                                       
Query: 181 gagcatctgccaagcctgaagggaagggctcaaaaatacagcaaagcagtgggtgacctc 240
           |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 654 gagcatctgccacgcctgaagggaagggctcagaaatacagcaaagcagtgggtgacctc 595

                                                                       
Query: 241 tttgtttctgccagctgataaggagctcattagctacaatttgtcaactgccttgggact 300
           |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tttgtttctgccagc---taaggagctcattagctacaatttgtcaactgccttgggact 538

                                                                       
Query: 301 aggtccttgacaatttatggtgctctgatagagaggttacaatgatcaatgatggctctg 360
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aggtctttgacaatttatggtgctctgatagagaggttacaatgatcaatgatggctctg 478

                                                                       
Query: 361 agtgccacctgatagtgcataagtttgtaatacattaatataaataaatatgcctacatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 agtgccacctgatagtgcataagtttgtaatacattaatataaataaatatgcctacatt 418

                                                                       
Query: 421 atatgtatatgatgtatatacatatatgtatatgtatatccctatctggttacacgttca 480
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gtatgtatatgatgtatatacatatatgtatatgtatatccctatctggttacacgttca 358

                                                                       
Query: 481 cagatccatttgaccatatccatttattcatccttcattcatttatcctctacccattta 540
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cagatccatttgtccatatccatttattcatccttcattcatttatcctctacccattta 298

                                                                     
Query: 541 tttatccatgcatccatcttcaatgccccttcttttccacactctcctgaatacagtc 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tttatccatgcatccatcttcaatgccccttcttttccacactctcctgaatacagtc 240


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 995
Length adjustment: 10
Effective length of query: 588
Effective length of database: 985
Effective search space:   579180
Effective search space used:   579180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)