XXXXXXXXXXXXXXXXXXXXXXXTTCAGGATCCGCGGAATTCTTTGTTTA
GCTCTGAGCCCCATTTTTAATGGGGTTATCTGATTTTCTGAAGTCCACCT
CTTCAGTTCACCTTATTTATATTGGATATTACTCCCCTATCTGATTTAGG
ATAGGTAAAGATCCTTTCCCAGTCTGTTGGTGGCCTTTTTGTCTAATTGA
CTGTGTCCTTTGCCTTACAGAAGCTTTGCAATTTTATGGGGTCCCATTTG
TCAACTCTTGATCTTACAGTACAAAGCCATTGCTGTTCTATTCAGGAATT
TTTCCCCTGTACCCATATCTTCGAGGCTTTTCCCCACTTTCTCCTCTATA
AGTTTCAGTGTCTCTGGTTTTATGTGGAGTCCCTTGATCCACTTAATTTG
ACCTTAGTACAAGGAGATAGGAATGGATCAATTTGTATTCTTCTATATGA
TAACCGCCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTGTTTTTTTT
CCACTGGGTGGTTTTGGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGT
GTGGGTTCATCTCTGGGTCTTCAATTCTATTCCATTGGTCTTCTTGTCTG
TCATTATACCAGTACCATGCAGTTTTTAATCACAATTGCTCTGTGTTAAA
GCTTTAGGTCAGGCATTCTGATTCCACCAGAGGTTCTTTTATCCTTGATA
AGAGTTTTTGCTATCATAGTTTTTTTATTTTTCCAGATGAATTTGCAGAT
T

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
TTGGCATTCATAATATCATCACAAGAAGACCAATTATTCCATTGCCAAAG
GCCAGACTTTATTAGTAAAAAAATATGGCACACTGAAGCACATAATTACA
TAGGTAAGAAATTAATAATATTTTATTTTAAATGGCTTGCATAATGAATG
CTGTAGACATGGAAAGCTTTTAGGTCTCTACAGAATCTATGAGAAATTTA
GCATGGATGAATGCATTCATGCCACTTAATGTCCCTGAATATCACCCTTG
TGGATTTGAGTTTTCAGTAGAGGATTTAAGATAAATGGTCTTTTAACTAG
TTTTCAATTCTTAATACATTTGGATTATTACTCTACTTTAAAATTACTTT
TTAATGGAGTAATCTATATATTTATTCAATAAATATACCACATTTCAGCA
ATTACATGACCATATTCTAACCAAATATTAGGAAAATAAATAGAATAAGA
TGAAGGTGTATTTATTTTTGCCTATTATCCTCTTTAGTATTGGAAAGGCA
ATAAGGAGATAATCACCAGTTCAATAAGTGTTCAACAGGGGGAAAAGAAG
AAAAGTGAATACGGAGTGTAAAAGAGAAGCAGGGGAATCGTTGCTTTCTA
GAAGAAGAGATAAGTCATTAGGACAACACATGTGAGTAGAAATAATGGCA
TGATCGAAGATGGAGGAGACCTCAGAGTGTGCTTTGACCATCTGAGAGGT
CA

Query= MSMg01no547_k02.g1 MSMg01no547_k02.g1 CHROMAT_FILE:
MSMg01no547_k02.g1 PHD_FILE: MSMg01no547_k02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:19 2005
         (577 letters)



>mm_chr1_101394091_101395067
          Length = 977

 Score = 1083 bits (560), Expect = 0.0
 Identities = 569/572 (99%)
 Strand = Plus / Minus

                                                                       
Query: 6   attcataatatcatcacaagaagaccaattattccattgccaaaggccagactttattag 65
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 905 attcataatatcatcacaagaagaacaattattccattgccaaaggccagactttattag 846

                                                                       
Query: 66  taaaaaaatatggcacactgaagcacataattacataggtaagaaattaataatatttta 125
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 taaaaaaatatgacacactgaagcacataattacataggtaagaaattaataatatttta 786

                                                                       
Query: 126 ttttaaatggcttgcataatgaatgctgtagacatggaaagcttttaggtctctacagaa 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 ttttaaatggcttgcataatgaatgctgtagacatggaaagcttttaggtctctacagaa 726

                                                                       
Query: 186 tctatgagaaatttagcatggatgaatgcattcatgccacttaatgtccctgaatatcac 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tctatgagaaatttagcatggatgaatgcattcatgccacttaatgtccctgaatatcac 666

                                                                       
Query: 246 ccttgtggatttgagttttcagtagaggatttaagataaatggtcttttaactagttttc 305
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 665 ccttgtggatttgagttttcagtagaggatttaagataaatggccttttaactagttttc 606

                                                                       
Query: 306 aattcttaatacatttggattattactctactttaaaattactttttaatggagtaatct 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aattcttaatacatttggattattactctactttaaaattactttttaatggagtaatct 546

                                                                       
Query: 366 atatatttattcaataaatataccacatttcagcaattacatgaccatattctaaccaaa 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atatatttattcaataaatataccacatttcagcaattacatgaccatattctaaccaaa 486

                                                                       
Query: 426 tattaggaaaataaatagaataagatgaaggtgtatttatttttgcctattatcctcttt 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tattaggaaaataaatagaataagatgaaggtgtatttatttttgcctattatcctcttt 426

                                                                       
Query: 486 agtattggaaaggcaataaggagataatcaccagttcaataagtgttcaacagggggaaa 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 agtattggaaaggcaataaggagataatcaccagttcaataagtgttcaacagggggaaa 366

                                           
Query: 546 agaagaaaagtgaatacggagtgtaaaagaga 577
           ||||||||||||||||||||||||||||||||
Sbjct: 365 agaagaaaagtgaatacggagtgtaaaagaga 334


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space:   548289
Effective search space used:   548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)