BAC Information

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BAC

Clone NameB6Ng01-004G11
Chromosome10 (Build37)
Map Location 75,918,587 - 75,991,982
singlet/doubletdoublet
Overlap gene2610028H24Rik, A130042E20Rik, Mcm3ap
Upstream gene1110038D17Rik, Snrpd3, AI646023, Ggt1, Ggtla1, Susd2, Cabin1, Ddt, Gstt3, Gstt1, Gstt4, Gstt2, Mif, Derl3, Smarcb1, Mmp11, Ndg2, Gm867, Vpreb3, EG333669, Suhw2, Slc5a4b, Slc5a4a, LOC100040150, Prmt2, S100b, Dip2a, Pcnt
Downstream geneLss, 1700027D21Rik, Ftcd, Col6a2, Col6a1, Pcbp3, LOC100041099, Slc19a1, Col18a1, LOC665762, Pofut2, Adarb1, 1810008A18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004G11.bB6Ng01-004G11.g
ACCDH841824DH841825
length1,161700
definitionDH841824|Mus musculus domesticus DNA, BAC clone: B6Ng01-004G11, 5' end.DH841825|Mus musculus domesticus DNA, BAC clone: B6Ng01-004G11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,918,587 - 75,919,768)(75,991,286 - 75,991,982)
sequence
gaattcagaagcctagttagcattatataaccaagccgtggtgactcacc
tgcaatcccagcacttggggtctagaggcaagagagtcaaaatttcgggg
acatccttggctacatagtgagtttgaagtcaacctgggctgcatgaggc
ctcatctcagaaaagaagaaaaaaaaaaaaaagcaaaccattaaaacaga
caaaacagcagcggctaagcagtacacacctttgatcccagggctgcgga
ggcaaaggtagctgagctctaggagttccaggatagccaaggctgcaaga
aaagaccctgtctcaaaacaaaatataggacacccgaactattttttgga
tttcaatggtgtggagtaaatgacactgttgtactacaaagtcttttgta
aaagcatttagtttttttttattcttatgtatgggcatgttttgcttgca
tatatgtatgtatgttcgccatgtgcgtgcctggcgtccagggggtacag
aataggacatcagatcctctggaactggagttacagatgtttgtgagcaa
ctgtgtgtgtgctggaaccaaagcagggctcctctgcaaggtctgcagag
tgcacttaaccacggagccatctttccagccctacaacgtatgcttaata
tttgatcttacagcttttaaaagactgcatagcttgaaagtcttcaccaa
cagtccctctaaccatgatcgttttctttctttctgaatttgacatgttt
gagtatgtagctggagtcatgtgacttctgtctttctgtgactgtcttag
tttggttagtataatgcacctaagacgaatccatactgtagtcagcgaca
gattgaatggcatggcagagtatgggtgaccacatttggtctcataccta
gttgtctggtatgggaaggaagcccaaaagcttgacttagagaccctgcc
ttttggagcacctgccactcctgctgttgggtgcagcctcgtccaaagct
cctggagtccctgtcagcctgggactgcatttgctcttgactctgtctca
caaggatttgcaacaagtctggcttctacttgctctatgctgctgggctg
aaagttctaatgcttctgtttgggccccttgaactctgggcttggttgtt
tgactaaatgg
gaattcattttgacaaatattaggcatccgagtttaagtagttttaagta
gactggtattcagaaaagagaacaaggctagataaagaaatctgagagtc
atcgggtggcatttgaaatcatgagattcgataagatcaactagaaactg
aacagagaagctcgactttcctggtccatcgaggaggaaaactaagggac
tagggtcaaagaaagcaagtgaagccctgaagggagtacaagatggagtt
gatggcaatcgctgattagatgtgggggaagtgattagttactgactctg
gggagactataaaatggggttgatggtacttgctgattggacgtggggaa
atgattagttactgacctaggagctgccttaggagtcagagatgacagga
aaagaaagatatttctatttaaaaacaccaggctggacatagatgttgat
ttctgtttcctgcccatgtcccagtccaaagacaaagacattaaaaaccc
aggacagaagtgaaaaggaacgggggagaggggaggatccagaagggagg
gaatgaggggtggactcaatcaaaacacactatatgcatgtttgaagctc
tggattttagaaaaatattttttaagaaaatttataaagactagaagtag
atggaggatgactgattcggcaaaagcagagaaaatgaaaacctctatgt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_75918587_75919768
seq2: B6Ng01-004G11.b_45_1205

seq1  GAATTCAGAAGCCTAGTTAGCATTATATAACCAAGCCGTGGTGACTCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAGCCTAGTTAGCATTATATAACCAAGCCGTGGTGACTCACC  50

seq1  TGCAATCCCAGCACTTGGGGTCTAGAGGCAAGAGAGTCAAAATTTCGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCCCAGCACTTGGGGTCTAGAGGCAAGAGAGTCAAAATTTCGGGG  100

seq1  ACATCCTTGGCTACATAGTGAGTTTGAAGTCAACCTGGGCTGCATGAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTTGGCTACATAGTGAGTTTGAAGTCAACCTGGGCTGCATGAGGC  150

seq1  CTCATCTCAGAAAAGAAGAAAAAAAAAAAAAAGCAAACCATTAAAACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTCAGAAAAGAAGAAAAAAAAAAAAAAGCAAACCATTAAAACAGA  200

seq1  CAAAACAGCAGCGGCTAAGCAGTACACACCTTTGATCCCAGGGCTGCGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAGCAGCGGCTAAGCAGTACACACCTTTGATCCCAGGGCTGCGGA  250

seq1  GGCAAAGGTAGCTGAGCTCTAGGAGTTCCAGGATAGCCAAGGCTGCAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGGTAGCTGAGCTCTAGGAGTTCCAGGATAGCCAAGGCTGCAAGA  300

seq1  AAAGACCCTGTCTCAAAACAAAATATAGGACACCCGAACTATTTTTTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACCCTGTCTCAAAACAAAATATAGGACACCCGAACTATTTTTTGGA  350

seq1  TTTCAATGGTGTGGAGTAAATGACACTGTTGTACTACAAAGTCTTTTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATGGTGTGGAGTAAATGACACTGTTGTACTACAAAGTCTTTTGTA  400

seq1  AAAGCATTTAGTTTTTTTTTATTCTTATGTATGGGCATGTTTTGCTTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATTTAGTTTTTTTTTATTCTTATGTATGGGCATGTTTTGCTTGCA  450

seq1  TATATGTATGTATGTTCGCCATGTGCGTGCCTGGCGTCCAGGGGGTACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTATGTATGTTCGCCATGTGCGTGCCTGGCGTCCAGGGGGTACAG  500

seq1  AATAGGACATCAGATCCTCTGGAACTGGAGTTACAGATGTTTGTGAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGACATCAGATCCTCTGGAACTGGAGTTACAGATGTTTGTGAGCAA  550

seq1  CTGTGTGTGTGCTGGAACCAAAGCAGGGCTCCTCTGCAAGGTCTGCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTGTGCTGGAACCAAAGCAGGGCTCCTCTGCAAGGTCTGCAGAG  600

seq1  TGCACTTAACCACGGAGCCATCTTTCCAGCCCTACAACGTATGCTTAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTAACCACGGAGCCATCTTTCCAGCCCTACAACGTATGCTTAATA  650

seq1  TTTGATCTTACAGCTTTTAAAAGACTGCATAGCTTGAAAGTCTTCACCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCTTACAGCTTTTAAAAGACTGCATAGCTTGAAAGTCTTCACCAA  700

seq1  CAGTCCCTCTAACCATGATCGTTTTCTTTCTTTCTGAATTTGACATGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCTCTAACCATGATCGTTTTCTTTCTTTCTGAATTTGACATGTTT  750

seq1  GAGTATGTAGCTGGAGTCATGTGACTTCTGTCTTTCTGTGACTGTCTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATGTAGCTGGAGTCATGTGACTTCTGTCTTTCTGTGACTGTCTTAG  800

seq1  TTTGGTTAGTATAATGCACCTAAGACGAATCCATACTGTAGTCAGCGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTAGTATAATGCACCTAAGACGAATCCATACTGTAGTCAGCGACA  850

seq1  GATTGAATGGCATGGCAGAGTATGGGTGACCACATTTGGTCTCATACCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAATGGCATGGCAGAGTATGGGTGACCACATTTGGTCTCATACCTA  900

seq1  GTTGTCTGGTATGGGAAGGAAGCCCAAAAGCTTGACTTAGGAGAACCCTG  950
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  GTTGTCTGGTATGGGAAGGAAGCCCAAAAGCTTGACTTA-GAG-ACCCTG  948

seq1  CCTTTTGGAGCACCTGCCACTCCTGCTGTTGGGTGCAGCCTCGTCCAAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGGAGCACCTGCCACTCCTGCTGTTGGGTGCAGCCTCGTCCAAAG  998

seq1  CTCCTGGAGTCCCTGTCCAGCCTGGGACTGCCATTTGGCCTCTTGACTCT  1050
      |||||||||||||||| ||||||||||||| ||||||  |||||||||||
seq2  CTCCTGGAGTCCCTGT-CAGCCTGGGACTG-CATTTG--CTCTTGACTCT  1044

seq1  GTCTCACAAGGGATTTGCAACAAAGGTCTGGCTTCCTACCTTGCTCCTAT  1100
      ||||||||| |||||||||||||  ||||||||| ||| |||||| ||||
seq2  GTCTCACAA-GGATTTGCAACAA--GTCTGGCTT-CTA-CTTGCT-CTAT  1088

seq1  GGCCTGGCTTGGGCTGACCAGTTCCTAGTGCTTCTGTTTGAGCCCCTCTG  1150
      |  |||   ||||||||  |||| ||| |||||||||||| |||||| ||
seq2  G--CTG--CTGGGCTGA-AAGTT-CTAATGCTTCTGTTTGGGCCCCT-TG  1131

seq1  ATACTCTGGGCTTGGTTGTTTGACTTTAATGG  1182
      | |||||||||||||||||||||| | |||||
seq2  A-ACTCTGGGCTTGGTTGTTTGAC-TAAATGG  1161

seq1: chr10_75991286_75991982
seq2: B6Ng01-004G11.g_67_766 (reverse)

seq1  ACATAGAGGTTTTCATTTTCTCTGC-TTTGCCGAATCAGTCATTCCTCCA  49
      ||||||||||||||||||||||||| |||||||||||||||| |||||||
seq2  ACATAGAGGTTTTCATTTTCTCTGCTTTTGCCGAATCAGTCA-TCCTCCA  49

seq1  TCTACTTCTAGTCTTTAT-AATTTTCTT-TAAAATA-TTTTCTAAAATCC  96
      |||||||||||||||||| |||||||||  |||||| |||||||||||||
seq2  TCTACTTCTAGTCTTTATAAATTTTCTTAAAAAATATTTTTCTAAAATCC  99

seq1  AGAGCTTCAAACATGCATATAGTGTGTTTTGATTGAGTCCACCCCTCATT  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTCAAACATGCATATAGTGTGTTTTGATTGAGTCCACCCCTCATT  149

seq1  CCCTCCCTTCTGGATCCTCCCCTCTCCCCCGTTCCTTTTCACTTCTGTCC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCTTCTGGATCCTCCCCTCTCCCCCGTTCCTTTTCACTTCTGTCC  199

seq1  TGGGTTTTTAATGTCTTTGTCTTTGGACTGGGACATGGGCAGGAAACAGA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTTTAATGTCTTTGTCTTTGGACTGGGACATGGGCAGGAAACAGA  249

seq1  AATCAACATCTATGTCCAGCCTGGTGTTTTTAAATAGAAATATCTTTCTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACATCTATGTCCAGCCTGGTGTTTTTAAATAGAAATATCTTTCTT  299

seq1  TTCCTGTCATCTCTGACTCCTAAGGCAGCTCCTAGGTCAGTAACTAATCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTCATCTCTGACTCCTAAGGCAGCTCCTAGGTCAGTAACTAATCA  349

seq1  TTTCCCCACGTCCAATCAGCAAGTACCATCAACCCCATTTTATAGTCTCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCACGTCCAATCAGCAAGTACCATCAACCCCATTTTATAGTCTCC  399

seq1  CCAGAGTCAGTAACTAATCACTTCCCCCACATCTAATCAGCGATTGCCAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTCAGTAACTAATCACTTCCCCCACATCTAATCAGCGATTGCCAT  449

seq1  CAACTCCATCTTGTACTCCCTTCAGGGCTTCACTTGCTTTCTTTGACCCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCATCTTGTACTCCCTTCAGGGCTTCACTTGCTTTCTTTGACCCT  499

seq1  AGTCCCTTAGTTTTCCTCCTCGATGGACCAGGAAAGTCGAGCTTCTCTGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTTAGTTTTCCTCCTCGATGGACCAGGAAAGTCGAGCTTCTCTGT  549

seq1  TCAGTTTCTAGTTGATCTTATCGAATCTCATGATTTCAAATGCCACCCGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTCTAGTTGATCTTATCGAATCTCATGATTTCAAATGCCACCCGA  599

seq1  TGACTCTCAGATTTCTTTATCTAGCCTTGTTCTCTTTTCTGAATACCAGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTCAGATTTCTTTATCTAGCCTTGTTCTCTTTTCTGAATACCAGT  649

seq1  CTACTTAAAACTACTTAAACTCGGATGCCTAATATTTGTCAAAATGAATT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTAAAACTACTTAAACTCGGATGCCTAATATTTGTCAAAATGAATT  699

seq1  C  697
      |
seq2  C  700