BAC Information

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BAC

Clone NameB6Ng01-005A19
Chromosome7 (Build37)10 (Build37)
Map Location 92,937,329 - 92,938,46065,556,131 - 65,556,629
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG620480, Olfr291, LOC666276, Olfr290, ENSMUSG00000070600, F830104D24Rik, LOC620641, EG620672, Vmn2r-ps68, EG620697, Vmn2r-ps69, LOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445, Vmn2r-ps74, EG244114
Downstream geneEG620928, EG546980, LOC666382, LOC637652, LOC637667, EG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76, Olfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005A19.bB6Ng01-005A19.g
ACCDH842296DH842297
length1,117771
definitionDH842296|Mus musculus domesticus DNA, BAC clone: B6Ng01-005A19, 5' end.DH842297|Mus musculus domesticus DNA, BAC clone: B6Ng01-005A19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(92,937,329 - 92,938,460)(65,556,131 - 65,556,629)
sequence
gaattccatggtcatcatttgttacgatcactcctatccagttccatctg
aaatgatcaagtaagtacaccatggctcgttttagagatgtgtcctatgg
agatatctggtaaaggtgaggaaattgttcattatcactcagagaacaat
ggaaattaccacagtaaagctgaaaaatgcagaacataggcaacaatata
aacatgatggaatgcagagggatacttgtaagatcagagtgtgcttgaac
aaagtgtattaatgctagaaattatttattcttcatctcattattacaat
tatatccaacctcttgagattctctaaacaatacaagtatactgggtctt
ctggtataacattttgaaattcttctgtctcccattcccatttatgataa
agttgttttgtttgccacaaaatatatctatgcatttatgcttgatgaat
tataataaacataagccctttctctgccatttatactgccttcatactca
aaaagtctcactgtggtgagaaaacatattctttaaaattaatccatctt
gacttgacttaactcaggaattctggacatgaaaaggaacagaccaagga
ttatagatactgtccataacagtgatgtaagtaaaattaaatatcttctc
ttatttgtccagttgtaattaggaataagatcattacttttcaaaaccaa
accagttttctcaccatatttttaaatgttaaatactagagaaatgttgg
gtaaaagatggcagttcttatttatttcttccagggaaagataaacaaag
ataatcaaatgcctggtcttggatgcctccctgaaaatagagcagtagag
aatataattcctacttctgtacaagatgagccagaaaaaaaaaatccttg
catacagagaggaaatcaacacaaacccacagttacgtactggttctaac
tgagagaaaggaatagtttacataaattctctaaagagagacaacataat
ttctgtgttttatacagcttataacacaaatcatgagctatcacagcttc
tcttcatgtcataatgatgacaataaatatgtagatgtaatgtgaagaaa
attgatcacatgcactt
gaattctttttttttttccattttttattaggtatttagctcatttacat
ttccaatgctataccaaaagtcccccatatccacacacccccactcccct
gcccacccactccccctttttggccctggtgttcccctgtactgggacat
ataaagtttgcaagtccaatgggcctctctttccagtgatggccgactag
gccatcttttgatatatatgcagctagagtcaagagctccggggtactgg
ttagttcataatgttgttacacctatagggttgcagatccctttagctcc
ttggctactttctctagctcctccattgggagccctatgatccatccatt
agctgactgtgagcatccacttctgtgtttgctaggccccggcatagtct
cacaagagacagctacatctgggtcctttcaataaaatcttgctagtgta
tgcaatggtgtcagcgtttggatgctgattatggggtggatccctggata
tggcagtctctacatggtccgtgacagcatatgctggcgaggatgtggag
aaagaggaacactcctccattgttggtgggattgcaggcttgtacaacca
ctctggaaatcagtctggcggttcctcagaaaattggacatagtactacc
ggaggatccagcaatacctctcctggcatatatccagaagatgccccaac
tggtaagaaggacacatgctcccactatgttcataagcagccttatttat
aatagccagaagctggaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_92937329_92938460
seq2: B6Ng01-005A19.b_49_1165

seq1  GAATTCCATGGTCATCATTTGTTACGATCACTCCTATCCAGTTCCATCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGTCATCATTTGTTACGATCACTCCTATCCAGTTCCATCTG  50

seq1  AAATGATCAAGTAAGTACACCATGGCTCGTTTTAGAGATGTGTCCTATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATCAAGTAAGTACACCATGGCTCGTTTTAGAGATGTGTCCTATGG  100

seq1  AGATATCTGGTAAAGGTGAGGAAATTGTTCATTATCACTCAGAGAACAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCTGGTAAAGGTGAGGAAATTGTTCATTATCACTCAGAGAACAAT  150

seq1  GGAAATTACCACAGTAAAGCTGAAAAATGCAGAACATAGGCAACAATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTACCACAGTAAAGCTGAAAAATGCAGAACATAGGCAACAATATA  200

seq1  AACATGATGGAATGCAGAGGGATACTTGTAAGATCAGAGTGTGCTTGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATGGAATGCAGAGGGATACTTGTAAGATCAGAGTGTGCTTGAAC  250

seq1  AAAGTGTATTAATGCTAGAAATTATTTATTCTTCATCTCATTATTACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTATTAATGCTAGAAATTATTTATTCTTCATCTCATTATTACAAT  300

seq1  TATATCCAACCTCTTGAGATTCTCTAAACAATACAAGTATACTGGGTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCAACCTCTTGAGATTCTCTAAACAATACAAGTATACTGGGTCTT  350

seq1  CTGGTATAACATTTTGAAATTCTTCTGTCTCCCATTCCCATTTATGATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATAACATTTTGAAATTCTTCTGTCTCCCATTCCCATTTATGATAA  400

seq1  AGTTGTTTTGTTTGCCACAAAATATATCTATGCATTTATGCTTGATGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTTTGTTTGCCACAAAATATATCTATGCATTTATGCTTGATGAAT  450

seq1  TATAATAAACATAAGCCCTTTCTCTGCCATTTATACTGCCTTCATACTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAAACATAAGCCCTTTCTCTGCCATTTATACTGCCTTCATACTCA  500

seq1  AAAAGTCTCACTGTGGTGAGAAAACATATTCTTTAAAATTAATCCATCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCTCACTGTGGTGAGAAAACATATTCTTTAAAATTAATCCATCTT  550

seq1  GACTTGACTTAACTCAGGAATTCTGGACATGAAAAGGAACAGACCAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGACTTAACTCAGGAATTCTGGACATGAAAAGGAACAGACCAAGGA  600

seq1  TTATAGATACTGTCCATAACAGTGATGTAAGTAAAATTAAATATCTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGATACTGTCCATAACAGTGATGTAAGTAAAATTAAATATCTTCTC  650

seq1  TTATTTGTCCAGTTGTAATTAGGAATAAGATCATTACTTTTCAAAACCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGTCCAGTTGTAATTAGGAATAAGATCATTACTTTTCAAAACCAA  700

seq1  ACCAGTTTTCTCACCATATTTTTAAATGTTAAATACTAGAGAAATGTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTTTCTCACCATATTTTTAAATGTTAAATACTAGAGAAATGTTGG  750

seq1  GTAAAAGATGGCAGTTCTTATTTATTTCTTCCAGGGAAAGATAAACAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGATGGCAGTTCTTATTTATTTCTTCCAGGGAAAGATAAACAAAG  800

seq1  ATAATCAAATGCCTGGTCTTGGATGCCTCCCTGAAAATAGAGCAGTAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAAATGCCTGGTCTTGGATGCCTCCCTGAAAATAGAGCAGTAGAG  850

seq1  AATATAATTCCTACTTCTGTACAAGATGAGCCAGAAAAAAAAAATCCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATTCCTACTTCTGTACAAGATGAGCCAGAAAAAAAAAATCCTTG  900

seq1  CATACAGAGAGGAAATCAACACAAACCCACAGTTACGTACTGGTTCTAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGAGAGGAAATCAACACAAACCCACAGTTACGTACTGGTTCTAAC  950

seq1  TGAGAGGAAAGGGAATAAGTTTACATTAAATTCTCTAAAGAGAGACAACA  1000
      ||||||  || ||||| |||||||| ||||||||||||||||||||||||
seq2  TGAGAG--AAAGGAAT-AGTTTACA-TAAATTCTCTAAAGAGAGACAACA  996

seq1  TAAATTTCTGTTGTTTTATACAGCCTATAAACACAAATCATGAGGCTATC  1050
      | |||||||| ||||||||||||| ||| |||||||||||||| ||||||
seq2  T-AATTTCTG-TGTTTTATACAGCTTAT-AACACAAATCATGA-GCTATC  1042

seq1  ACAAGCCTTCTTCTTCATGTTCATAATGATGACATATAATATGGTTAGAT  1100
      |||   |||| |||||||| ||||||||||||||   ||||||  |||||
seq2  ACA--GCTTC-TCTTCATG-TCATAATGATGACAATAAATATG--TAGAT  1086

seq1  GTAATGTGAAGAAATATGATCACATTGCACTT  1132
      ||||||||||||||  |||||||| |||||||
seq2  GTAATGTGAAGAAAATTGATCACA-TGCACTT  1117

seq1: chr10_65556131_65556629
seq2: B6Ng01-005A19.g_75_573 (reverse)

seq1  GACTGCCATATCCAGGGATCCACCCCATAATCAGCATCCAAACGCTGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCCATATCCAGGGATCCACCCCATAATCAGCATCCAAACGCTGACA  50

seq1  CCATTGCATACACTAGCAAGATTTTATTGAAAGGACCCAGATGTAGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCATACACTAGCAAGATTTTATTGAAAGGACCCAGATGTAGCTGT  100

seq1  CTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCAC  150

seq1  AGTCAGCTAATGGATGGATCATAGGGCTCCCAATGGAGGAGCTAGAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCTAATGGATGGATCATAGGGCTCCCAATGGAGGAGCTAGAGAAA  200

seq1  GTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACGTTA  250
      ||||||||||||||||||||||||||||||||||||||| |||||| |||
seq2  GTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGTAACAACATTA  250

seq1  TGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATATATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATATATCAA  300

seq1  AAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCA  350

seq1  AACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCAAAAAGGGGGAGT  400
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AACTTTATATGTCCCAGTACAGGGGAACACCAGGGCCAAAAAGGGGGAGT  400

seq1  GGGTGGGCAGGGGAGTGGGGGTGGGTGGATATGGGGGACTTTTGGTATAG  450
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGGTGGGCAGGGGAGTGGGGGTGTGTGGATATGGGGGACTTTTGGTATAG  450

seq1  CATTGGAAATGTAAATGAGTTAAATACCTAATAAAAAATGGAAAAAAAA  499
      ||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CATTGGAAATGTAAATGAGCTAAATACCTAATAAAAAATGGAAAAAAAA  499