BAC Information

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BAC

Clone NameB6Ng01-005B20
Chromosome10 (Build37)
Map Location 27,490,982 - 27,492,090
singlet/doubletsinglet
Overlap genenone
Upstream geneArhgap18, Lama2
Downstream geneLOC100040385, LOC100040961, LOC100040401, Ptprk, E430004N04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005B20.bB6Ng01-005B20.g
ACCDH842342DH842343
length1,101892
definitionDH842342|Mus musculus domesticus DNA, BAC clone: B6Ng01-005B20, 5' end.DH842343|Mus musculus domesticus DNA, BAC clone: B6Ng01-005B20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaaaatagttttgatttgcatttccctaatgaataaggatatt
gaacatttctttaagtacttctcagctatttcagttttctctttcaaaaa
attgtcttgcttagatctgtacatcatttaattgcgttacttgttttctt
gatttatatattttcagttttcagttatcatattttcgacgttagccttc
tattggatgtgtcatcactaaaaatcttttcccgttatgtaggctacctt
tttatgctaatgatggtgccccttgccagcttttaacagtttttagtttc
atgaagtcccatttactaattgttggtcttaatgtctgtgctaatgagaa
cctgtatgttcttcgggagttataaaattctgcttttataggttaggcac
tttctgatcatttgttatgttccacctatatatattatttcccccttggg
tatctttttaaatcccacaagtatagcatcactgtatgaacatgatttgc
aaatacagaaataggaagcttcataaatacaactagcagcaagtcattga
atctatatttccaaggaaagatatctgagtacggctctaccagaccaaag
gacctgacaaacacttagtctgtgaccaaatatttgccaccaaaagaaga
atattcccgagaatgataaaatcttccagtttctgtctgtgctccagagc
tgactctacgccagttctccatatccaaatccagctgggagagagttggt
ctcccagtagtgctgacacacctgtgagcacaggtaagacaaccattctg
ttcagaaggacatgcccggacccctcagaatacaggaaatgtggagcacc
atagaacaggatccttaaaattccgatctgtgcctggagctgaccctgtg
cacagctctccaacctaaatcccacttggaaagaagctggtgtcccaagg
gtactgacacatctggagggtacaggagagtccaccacttctgctcaaat
tacagacccaagaggggtctactcagagcatcaggacagagaccaagaac
agattgggacaggatcattctagtttctcttgtctggagctggacctatg
a

gaattcaggttacgtggggtataagaatgtttacttacctagggcagtgg
aaacttcctttagtgtatgaaggtactcctaatgaggacttgacatgatg
ggggatgtggggtatcaactggctatctcttgttgccaggaaaggcttct
agtgatgggactgggttgcattcaactgagttgttggcccagaaggtctc
atgaaaatctccaaacaactcactgtttttaaggcaaattattgctctct
gccaactaacagtgggcccccttgcttaggacattacccacaagtctcag
tgaacatgaagaagtcacactggtgcctacatgtagccttccccactatg
ttctagtctctttggtgtaggaaggtactctgtaggttgctgaaagagaa
atgttactaaccactaacctacccagagaacctttgacatacaatctgtc
ccatctgcaaagtatgctagagcaaagatggcatagaacgtgtgggagta
gccaacccaagtctcatttgaattaggtccattccataagaaggcacctg
tacccaacactgcttatgtaaccaagaaccagagactagatagcccagaa
cctaagggaaaccaaatgatagtagtctaaaaaattatcaataaaaatga
ctctaaataatactcttccatactcatatatcagtgtcttatcatcagag
aggcttgctctgatagtggagaaagagaatctatgttggagacctctatt
acattcttttcctctgaactcaagtacccctaagaagaagaggtagaaca
attattagagccagatggaatggagcacaccggagaacatgttctttaaa
tcaactgagcaaagcccttataaacttatagagactgaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_27490982_27492090
seq2: B6Ng01-005B20.b_45_1145

seq1  GAATTCTCAAAATAGTTTTGATTTGCATTTCCCTAATGAATAAGGATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAAATAGTTTTGATTTGCATTTCCCTAATGAATAAGGATATT  50

seq1  GAACATTTCTTTAAGTACTTCTCAGCTATTTCAGTTTTCTCTTTCAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTTCTTTAAGTACTTCTCAGCTATTTCAGTTTTCTCTTTCAAAAA  100

seq1  ATTGTCTTGCTTAGATCTGTACATCATTTAATTGCGTTACTTGTTTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTTGCTTAGATCTGTACATCATTTAATTGCGTTACTTGTTTTCTT  150

seq1  GATTTATATATTTTCAGTTTTCAGTTATCATATTTTCGACGTTAGCCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATATATTTTCAGTTTTCAGTTATCATATTTTCGACGTTAGCCTTC  200

seq1  TATTGGATGTGTCATCACTAAAAATCTTTTCCCGTTATGTAGGCTACCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGATGTGTCATCACTAAAAATCTTTTCCCGTTATGTAGGCTACCTT  250

seq1  TTTATGCTAATGATGGTGCCCCTTGCCAGCTTTTAACAGTTTTTAGTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCTAATGATGGTGCCCCTTGCCAGCTTTTAACAGTTTTTAGTTTC  300

seq1  ATGAAGTCCCATTTACTAATTGTTGGTCTTAATGTCTGTGCTAATGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTCCCATTTACTAATTGTTGGTCTTAATGTCTGTGCTAATGAGAA  350

seq1  CCTGTATGTTCTTCGGGAGTTATAAAATTCTGCTTTTATAGGTTAGGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATGTTCTTCGGGAGTTATAAAATTCTGCTTTTATAGGTTAGGCAC  400

seq1  TTTCTGATCATTTGTTATGTTCCACCTATATATATTATTTCCCCCTTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGATCATTTGTTATGTTCCACCTATATATATTATTTCCCCCTTGGG  450

seq1  TATCTTTTTAAATCCCACAAGTATAGCATCACTGTATGAACATGATTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTTTAAATCCCACAAGTATAGCATCACTGTATGAACATGATTTGC  500

seq1  AAATACAGAAATAGGAAGCTTCATAAATACAACTAGCAGCAAGTCATTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAGAAATAGGAAGCTTCATAAATACAACTAGCAGCAAGTCATTGA  550

seq1  ATCTATATTTCCAAGGAAAGATATCTGAGTACGGCTCTACCAGACCAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATATTTCCAAGGAAAGATATCTGAGTACGGCTCTACCAGACCAAAG  600

seq1  GACCTGACAAACACTTAGTCTGTGACCAAATATTTGCCACCAAAAGAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGACAAACACTTAGTCTGTGACCAAATATTTGCCACCAAAAGAAGA  650

seq1  ATATTCCCGAGAATGATAAAATCTTCCAGTTTCTGTCTGTGCTCCAGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCCGAGAATGATAAAATCTTCCAGTTTCTGTCTGTGCTCCAGAGC  700

seq1  TGACTCTACGCCAGTTCTCCATATCCAAATCCAGCTGGGAGAGAGTTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTACGCCAGTTCTCCATATCCAAATCCAGCTGGGAGAGAGTTGGT  750

seq1  CTCCCAGTAGTGCTGACACACCTGTGAGCACAGGTAAGACAACCATTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGTAGTGCTGACACACCTGTGAGCACAGGTAAGACAACCATTCTG  800

seq1  TTCAGAAGGACATGCCCGGACCCCTCAGAATACAGGAAATGTGGAGCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAGGACATGCCCGGACCCCTCAGAATACAGGAAATGTGGAGCACC  850

seq1  ATAGAACAGGATCCTTAAAATTCCGATCTGTGCCTGGAGCTGACCCTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACAGGATCCTTAAAATTCCGATCTGTGCCTGGAGCTGACCCTGTG  900

seq1  CCACAGCTCTCCAAACCTAAATCCCACTTGGAAAG-AGCTGGTGTCCCAA  949
       ||||||||||| |||||||||||||||||||||| ||||||||||||||
seq2  -CACAGCTCTCC-AACCTAAATCCCACTTGGAAAGAAGCTGGTGTCCCAA  948

seq1  GGGTACTGACACACCT-GAGGGTACAGGAGAGTCCACCACTTCTGCTCAA  998
      ||||||||||||| || |||||||||||||||||||||||||||||||||
seq2  GGGTACTGACACATCTGGAGGGTACAGGAGAGTCCACCACTTCTGCTCAA  998

seq1  ATTACAGACCCAAGAGGGGCCTACTCAGAGCCATCAGGACAGAGAAACCA  1048
      ||||||||||||||||||| |||||||||| ||||||||||||||   | 
seq2  ATTACAGACCCAAGAGGGGTCTACTCAGAG-CATCAGGACAGAGA---CC  1044

seq1  AAGAACAGATTGGGACAGGATCATTCTAGTTTCCTTCTATGTCCTGGAGC  1098
      |||||||||||||||||||||||||||||||||  ||| ||| |||||||
seq2  AAGAACAGATTGGGACAGGATCATTCTAGTTTC--TCT-TGT-CTGGAGC  1090

seq1  TGACACTATGA  1109
      ||   ||||||
seq2  TGGACCTATGA  1101


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