BAC Information

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BAC

Clone NameB6Ng01-005J16
Chromosome10 (Build37)
Map Location 128,498,404 - 128,499,048
singlet/doubletsinglet
Overlap geneEG546487
Upstream genePtges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733
Downstream geneOlfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005J16.bB6Ng01-005J16.g
ACCDH842695DH842696
length646556
definitionDH842695|Mus musculus domesticus DNA, BAC clone: B6Ng01-005J16, 5' end.DH842696|Mus musculus domesticus DNA, BAC clone: B6Ng01-005J16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactatgtagaccaggctggttttgaacttatagagttccatttg
ccactgtctcctgcatgttgggattaagcgtgtgtcacttttccatgtaa
acatggcaccctcagggctaatgcaagaaagatggtacagattgacaccc
ttcatcttttcaggtgtacttaaaagaaacacagggtcagtgagatatct
cagaggataaaagcactttaggacaagtcccatgacttctttctcatacc
tgggacccactttgtggaagaagagaactgagtcccgcaacctgcccttt
aatgttcacatattctctgttgtatgtatgtacctccctccctcccaaca
cacacacacacacacacacacacacacacacacacacagatagagacagt
tgggatgatacagagcgtaaataaatatgtaaatgaaaacgtaagaaaat
aaaaaaataaaaataaagataaggaaataactaaaaattgaagctactac
atacagttttcctattttattataaatagtgtttattgttgaacaaacat
aatgtgttgctaatattaaaattaagaaattacttttttacatttatata
tttcgtgtgtatgtgtagtgtatatgtgtgtatttttttgtgttta
aataaccactcaagctcagtacttggccagctacaagcctgtattaacta
ccttccaaaacaaaagagataagtgaagctagcaccccttattaaaaagt
ttctctctttacagcaaatggagacaatcacagaaaactgcaacagaaca
caatgcaatggaaacaggaaacccaggcacagtggaaaaaatctacatca
cagttctcaaatctctgtaacatcatggaagataaagcaaaaagactgta
agagtcagaataccaggatgtctgctctgcattagtctctcctaaaaaat
gtcgtcatacacaagtttgaaaaatagcaatgtcaatggacatgctcatg
tggaaggggggacatttcacggagtcacacccataaacaaagaacagcag
gccaataatgactgctgggagaagaattaacctcattaaggcataaactt
gcttactgattatccattgcagaatcatcagctcttaaaccatatacatg
caaacaacaaaagcacactcaggagatgtgtgtgtgtgtgtgtgtgtgtg
tgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128498404_128499048
seq2: B6Ng01-005J16.b_47_692

seq1  GAATTCACTATGTAGACCAGGCTGGTTTTGAACTTATAGAGTTCCATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAGACCAGGCTGGTTTTGAACTTATAGAGTTCCATTTG  50

seq1  CCACTGTCTCCTGCATGTTGGGATTAAGCGTGTGTCACTTTTCCATGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTCTCCTGCATGTTGGGATTAAGCGTGTGTCACTTTTCCATGTAA  100

seq1  ACATGGCACCCTCAGGGCTAATGCAAGAAAGATGGTACAGATTGACACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGCACCCTCAGGGCTAATGCAAGAAAGATGGTACAGATTGACACCC  150

seq1  TTCATCTTTTCAGGTGTACTTAAAAGAAACACAGGGTCAGTGAGATATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTTTTCAGGTGTACTTAAAAGAAACACAGGGTCAGTGAGATATCT  200

seq1  CAGAGGATAAAAGCACTTTAGGACAAGTCCCATGACTTCTTTCTCATACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGATAAAAGCACTTTAGGACAAGTCCCATGACTTCTTTCTCATACC  250

seq1  TGGGACCCACTTTGTGGAAGAAGAGAACTGAGTCCCGCAACCTGCCCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACCCACTTTGTGGAAGAAGAGAACTGAGTCCCGCAACCTGCCCTTT  300

seq1  AATGTTCACATATTCTCTGTTGTATGTATGTACCTCCCTCCCTCCCAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCACATATTCTCTGTTGTATGTATGTACCTCCCTCCCTCCCAACA  350

seq1  CACACACACACACACACACACACACACACACACACACAGATAGAGACAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACAGATAGAGACAGT  400

seq1  TGGGATGATACAGAGCGTAAATAAATATGTAAATGAAAACGTAAGAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGATACAGAGCGTAAATAAATATGTAAATGAAAACGTAAGAAAAT  450

seq1  AAAAAAATAAAAATAAAGATAAGGAAATAACTAAAAATTGAAGCTACTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAAAAATAAAGATAAGGAAATAACTAAAAATTGAAGCTACTAC  500

seq1  ATACAGTTTTCCTATTTTATTATAAATAGTGTTTATTGTTGAACAAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTTTTCCTATTTTATTATAAATAGTGTTTATTGTTGAACAAACAT  550

seq1  AATGTGTTGCTAATATTAAAATTAAGAAATTACTTTTTTACATTTATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTGCTAATATTAAAATTAAGAAATTACTTTTTTACATTTATATA  600

seq1  TTTCGTGTGTATGTGTAGTGTATATGTGTGTA-TTTTTTGTGTTTA  645
      |||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTCGTGTGTATGTGTAGTGTATATGTGTGTATTTTTTTGTGTTTA  646