BAC Information

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BAC

Clone NameB6Ng01-005N17
Chromosome10 (Build37)
Map Location 36,975,802 - 36,976,223
singlet/doubletsinglet
Overlap genenone
Upstream geneHs3st5, Hdac2, Marcks, LOC100040846
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005N17.g
ACCDH842878
length968
definitionDH842878|Mus musculus domesticus DNA, BAC clone: B6Ng01-005N17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcttttagctttgagccccattttttgggggttatgtgagatg
ggggagaacagcttctagggttctttatctatgttggatatggatcccct
atctgatttaggattgtggaaaatcctttcccattctgttggtggccttt
gtgtctaatggatgaagccttttgcctgccgtttccagggatccgtgcca
tagtcaccctccctggctgacacctttgtatgctcctacaatattttgct
gaaatatttgattttcctgatatatctgtctcttgtgagactatgccggg
acctctccaacactcaactggatgctcactgggattattggatggagcca
ccccctcccctggaggatctggataaaatacccaaggaaatcaacgggtt
ggcaaccctattagtaggacaacaatgtcaactaaccagtccgcccggag
ctcatgtctctagctgcatatgtatcataaatcggtcttattggccctca
ttgacaacataggccccttcgactaccaaactttatgtgcctgcatacac
ctgaacaccagggcccattagtggagagtgggtgagtaagggcctacagt
ttcaagcctatcctttggctacagaggcatgtccatcatattctaagcca
cttgagacagaggccgggcagcgggtagctgtttttgggaggacagaaaa
cacattttaaaaggtctgagcagtgcagtgaaggaaaccagcggtgtcat
agctatggagtccatacaggctgtgctgccccaatcttcatcattgaacc
atcaagttgccataacggcattctgaggttgaatgagaccatgggtagag
aggctttctgtatcatttggcaagctctcctgggatgcaagctcttgagc
cttgagaaaatgcggtatgatctcaatctcacgtgtagtatattgtgtac
aagtcattgctcctgtga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_36975802_36976223
seq2: B6Ng01-005N17.g_609_1035

seq1  TGCATACACCTGTGATCCCAGCAACATTCCAGAGG-TAGTAGCTG---GA  46
      ||||||||||||    ||  |   ||||  || ||  ||| | ||    |
seq2  TGCATACACCTGAACACCAGGGCCCATT--AGTGGAGAGTGGGTGAGTAA  48

seq1  AGGCCTACAG-TTCAAGCCTATCC-TTGGCTACAGAGGCATGTCCATCAT  94
       ||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  GGGCCTACAGTTTCAAGCCTATCCTTTGGCTACAGAGGCATGTCCATCAT  98

seq1  ATTCTAAGCCACTTGAGACAGAGGCCGGGCAGCGGGTAGCTG-TTTTGGG  143
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATTCTAAGCCACTTGAGACAGAGGCCGGGCAGCGGGTAGCTGTTTTTGGG  148

seq1  AGGACAGAAAAACACA-TTTAAAAGGTCTGAGCAGTGCAGTGAAGGAAAC  192
      ||||||| |||||||| |||||||||||||||||||||||||||||||||
seq2  AGGACAG-AAAACACATTTTAAAAGGTCTGAGCAGTGCAGTGAAGGAAAC  197

seq1  CAGCAGGTGTCATAGCTATGGAGTCCATACAGGCTGTGCTGCCCCAATCT  242
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGC-GGTGTCATAGCTATGGAGTCCATACAGGCTGTGCTGCCCCAATCT  246

seq1  TCATCATTGAACCATCAGGTTGCCATAACGGCATTCTGAGGTTGAATGAG  292
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCATCATTGAACCATCAAGTTGCCATAACGGCATTCTGAGGTTGAATGAG  296

seq1  ACCAT-GGTAGAGAGGCTTTCTGTATCA-TTGGCAGGCTCTCCTGGGATG  340
      ||||| |||||||||||||||||||||| |||||| ||||||||||||||
seq2  ACCATGGGTAGAGAGGCTTTCTGTATCATTTGGCAAGCTCTCCTGGGATG  346

seq1  CAAGCTC-TGAGCCTTGAGAAAATGCGGTAAGATCCAAATCTCAGGTGGT  389
      ||||||| |||||||||||||||||||||| ||||  ||||||| || ||
seq2  CAAGCTCTTGAGCCTTGAGAAAATGCGGTATGATCTCAATCTCACGT-GT  395

seq1  AGTATAGTGTGTACAAGTCATTGCATCCTGTGA  422
      |||||| ||||||||||||||||| ||||||||
seq2  AGTATATTGTGTACAAGTCATTGC-TCCTGTGA  427