BAC Information

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BAC

Clone NameB6Ng01-005N22
Chromosome10 (Build37)
Map Location 104,594,664 - 104,595,794
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292, LOC100042383
Downstream geneTmtc2, EG627573, BC067068, Ccdc59, EG667758
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005N22.bB6Ng01-005N22.g
ACCDH842887DH842888
length1,1651,115
definitionDH842887|Mus musculus domesticus DNA, BAC clone: B6Ng01-005N22, 5' end.DH842888|Mus musculus domesticus DNA, BAC clone: B6Ng01-005N22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcaggaaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctagcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaagacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaact
tagtatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacaccctgggaaggagttacagagacaaagtttggagctgagatga
aaggatggtccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtaactgtctcttgtgagactatgcccgggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccaa
tgaggagctagagaagtagccagatctaaagggatctgcaccctatagcg
acacatattgaactaaccagtatcccgagctctgactctagctgcatatg
tatcaaagatgctagtcgcattcactggaagagaagtccaattgaaccgc
aaaccttatatgcctcagttacaggtatgcctagccaaaagaggaattgg
ttgggttaggggacc
gaattctgagccttaattgaatttaatttaattgaattgaattggtaaaa
aattggtaaaattgattaggttgaatatacagggtgagaagaaaagatgt
gtcaagacccagtcatatgtgaacttgtccagtagtctgggaagtaaaag
acagaagtaagtagaggctgggaaccaagagcctaacgtggaaagaatta
tttttctttatatttattatttaatataaggcaggttgaaaatgttaaat
accaaagggaagaattaagtaaagaaggagaagctaaatatgaaatggga
aaataaccaatgggtgagttgccttcccccaccaaagatgaggtcatgct
tacatattcaacaattattcatgattgaagtaattcaaaagtgaattaga
gagatacgctacttctgaaacaacaaaggatggagcgttagctgtgggta
aaagtaagcttactaaattgggtagtggaaggataatgttttcatttttt
caaggagataggagatgaggccatcagaagagagagaaacaagaggttca
caagttttgggaagcacctttgtaagagttttatagactgagaataagtt
ttgaataaggaaataacagagatgctttctgttctagtttacttccacgt
agaggttgggagttttcaatttatagtggtactaatatctttggaccaca
cttgtgcatctacactttattccctttagataaattctttcataagagac
tcttcatttcctcctgcagataagctagaatccagatgtcgcatacacat
gtataaatctacagtcaatataaaatggaggtcagactcagaatccccat
gctgctttttaaataggcatctagcatggttggaagaacactttgaaatg
caatatgtgtgttaaggcattgtggactttgtcatgtgtgtgtttttcta
agctctaaggaagaactgatgttaaactaaattacagactaaacaattat
tatcttgggatagcatagggtttggaaagattctcagtgttaatgactct
gctgctctacagaggtcctgatttggttctatacattcatatacaggtag
ctcgaactacatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104594664_104595794
seq2: B6Ng01-005N22.g_69_1183 (reverse)

seq1  TATATGTGGTTATGAGCTACCTGT-TATGAATGCTAGGAACCAAAATCAG  49
      ||||||| |||  ||||||||||| ||||||||    ||||| |||||||
seq2  TATATGTAGTT-CGAGCTACCTGTATATGAATGTATAGAACC-AAATCAG  48

seq1  GACCTCTGGTAGAGCAGCAAGAGCTCATATACACTGAGACATCTTTCCAA  99
      ||||||| |||||||||| |||| ||||  ||||||||| ||||||||||
seq2  GACCTCT-GTAGAGCAGC-AGAG-TCATTAACACTGAGA-ATCTTTCCAA  94

seq1  ACCCTATGCTATTCCCAAAGATAATAATTGTTTAGTCTTGTAATTTAGTT  149
      ||||||||||||  || |||||||||||||||||||| ||||||||||||
seq2  ACCCTATGCTAT--CCCAAGATAATAATTGTTTAGTC-TGTAATTTAGTT  141

seq1  TTAAACATTCAGTTCTTCCTTTAGAGCTTAGAAAAACACAACACATGACA  199
      |  |||| ||||||||||| ||||||||||||||||||| ||||||||||
seq2  T--AACA-TCAGTTCTTCC-TTAGAGCTTAGAAAAACAC-ACACATGACA  186

seq1  AAGTCCACAAATGCCTTAACACACAATATTGCCATTTCAAAGTGTTCTTC  249
      |||||||| ||||||||||||||| |||||| ||||||||||||||||||
seq2  AAGTCCAC-AATGCCTTAACACAC-ATATTG-CATTTCAAAGTGTTCTTC  233

seq1  CAACCATGCTAGATGCCTATTTAAAAAGCAGCATGGGGATTCTGAGTCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCATGCTAGATGCCTATTTAAAAAGCAGCATGGGGATTCTGAGTCTG  283

seq1  ACCTCCATTTTATATTGACTGTAGATTTATACATGTGTATGCGACATCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCATTTTATATTGACTGTAGATTTATACATGTGTATGCGACATCTG  333

seq1  GATTCTAGCTTATCTGCAGGAGGAAATGAAGAGTCTCTTATGAAAGAATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTAGCTTATCTGCAGGAGGAAATGAAGAGTCTCTTATGAAAGAATT  383

seq1  TATCTAAAGGGAATAAAGTGTAGATGCACAAGTGTGGTCCAAAGATATTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAAGGGAATAAAGTGTAGATGCACAAGTGTGGTCCAAAGATATTA  433

seq1  GTACCACTATAAATTGAAAACTCCCAACCTCTACGTGGAAGTAAACTAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCACTATAAATTGAAAACTCCCAACCTCTACGTGGAAGTAAACTAGA  483

seq1  ACAGAAAGCATCTCTGTTATTTCCTTATTCAAAACTTATTCTCAGTCTAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGCATCTCTGTTATTTCCTTATTCAAAACTTATTCTCAGTCTAT  533

seq1  AAAACTCTTACAAAGGTGCTTCCCAAAACTTGTGAACCTCTTGTTTCTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTTACAAAGGTGCTTCCCAAAACTTGTGAACCTCTTGTTTCTCT  583

seq1  CTCTTCTGATGGCCTCATCTCCTATCTCCTTGAAAAAATGAAAACATTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGATGGCCTCATCTCCTATCTCCTTGAAAAAATGAAAACATTAT  633

seq1  CCTTCCACTACCCAATTTAGTAAGCTTACTTTTACCCACAGCTAACGCTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCACTACCCAATTTAGTAAGCTTACTTTTACCCACAGCTAACGCTC  683

seq1  CATCCTTTGTTGTTTCAGAAGTAGCGTATCTCTCTAATTCACTTTTGAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTGTTGTTTCAGAAGTAGCGTATCTCTCTAATTCACTTTTGAAT  733

seq1  TACTTCAATCATGAATAATTGTTGAATATGTAAGCATGACCTCATCTTTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCAATCATGAATAATTGTTGAATATGTAAGCATGACCTCATCTTTG  783

seq1  GTGGGGGAAGGCAACTCACCCATTGGTTATTTTCCCATTTCATATTTAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGAAGGCAACTCACCCATTGGTTATTTTCCCATTTCATATTTAGC  833

seq1  TTCTCCTTCTTTACTTAATTCTTCCCTTTGGTATTTAACATTTTCAACCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTCTTTACTTAATTCTTCCCTTTGGTATTTAACATTTTCAACCT  883

seq1  GCCTTATATTAAATAATAAATATAAAGAAAAATAATTCTTTCCACGTTAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTATATTAAATAATAAATATAAAGAAAAATAATTCTTTCCACGTTAG  933

seq1  GCTCTTGGTTCCCAGCCTCTACTTACTTCTGTCTTTTACTTCCCAGACTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGGTTCCCAGCCTCTACTTACTTCTGTCTTTTACTTCCCAGACTA  983

seq1  CTGGACAAGTTCACATATGACTGGGTCTTGACACATCTTTTCTTCTCACC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACAAGTTCACATATGACTGGGTCTTGACACATCTTTTCTTCTCACC  1033

seq1  CTGTATATTCAACCTAATCAATTTTACCAATTTTTTACCAATTCAATTCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATATTCAACCTAATCAATTTTACCAATTTTTTACCAATTCAATTCA  1083

seq1  ATTAAATTAAATTCAATTAAGGCTCAGAATTC  1131
      ||||||||||||||||||||||||||||||||
seq2  ATTAAATTAAATTCAATTAAGGCTCAGAATTC  1115