BAC Information

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BAC

Clone NameB6Ng01-006I20
Chromosome10 (Build37)X (Build37)
Map Location 104,054,540 - 104,055,018131,433,806 - 131,434,665
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006I20.bB6Ng01-006I20.g
ACCDH843378DH843379
length680859
definitionDH843378|Mus musculus domesticus DNA, BAC clone: B6Ng01-006I20, 5' end.DH843379|Mus musculus domesticus DNA, BAC clone: B6Ng01-006I20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,054,540 - 104,055,018)(131,433,806 - 131,434,665)
sequence
gaattccttacccacagctggcttccttacccacagctggcttccttacc
cacagctggcttccttacccacatctggcttaattacctaatactaactc
cctaacccacttgtggtatccaaacccactttccccttccgtacccgggc
aatgcttccatacctctggaataattcataacccaggataggctacactc
ccctcagggataaaagaacctctgggggaatcaccacgccggacctaaaa
ctgtactacagagcaattgtgatcaaaactgcatgggactggtataccga
cagacaactacaccactggaacataattgaatacccaaagatgaaccccc
acacctatggtcacttgatctttgacaagggagctaaaaccatccagtgg
aaaaaacacaaccttttcaacaaatggtgctcgcacaactggcggttatc
atgtagaagaatgccaattgatccatttctatctccttgtactaagggca
aatctaactggatgaagaaactccacataaaaccagagacactgaaactt
atagaggataaagtacggaaaagcctcgaagatatgggtacaggggaaaa
attcctgaatagaacatccatagcttgtgctgtatgattaagactcgata
aatggcaccacataaaattgcaaaacttct
gaattcttgtgtgcttgggaaagaacctctgacttgaagcaaaaaagttc
ttattcaaatgtcattcaaagaagacaggaactacaataacaacaaaaaa
caatagaatatgtaaattgtattggtcacatccccaagaaaccaaccact
atgtgttttaggtgaaaggatttaaacacacacacacacacacacttaca
cactcacacacacattcattgtaattaaataataattaatgctaataagt
gcttgttcagtttatttttttgtctgtttatttgacacagtgtctcacta
tatagccccggttgaccttaagttcacatagatccccctgtctctgcctc
cttaggagttctgggattaaaagtatgtgctgccacacctggctctgttc
aatttgtctgtatcccacttggtgttgagcaacatttgtgagtccttatc
tgctatatctactgtcaaaaaggataagaaaggtgactatgaagttctgg
caaactgtaggtcagaaaacctagcttgattatggggaaggaaggggctt
ggaaagaatgggtaggacggaccaaggactgtactagcgtgggggagaac
tgagcagagcacaatgatacatgtgtataaaactgtcctaatgaaactca
ttattttctacaccaacttaagaaaaactaacagtatgaaagggaaccaa
gagccaagcagacaagagtaaagtgattgagctatggtcatttaaactgg
tgttttgcaaccatgacaaccctgcggataagcctcagaacatgtttgtt
tgtttgtttgtttgtttgttttgttttgttggtttgtttaaaagacagag
gtagtaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054540_104055018
seq2: B6Ng01-006I20.b_241_718 (reverse)

seq1  AGAAGCTTTGCAATTTTATGAGGTCCCATTTATCAACTCTCTATCTTACA  50
      ||||| |||||||||||||| ||| ||||||||| | |||  ||| ||||
seq2  AGAAGTTTTGCAATTTTATGTGGTGCCATTTATCGAGTCTTAATCATACA  50

seq1  GCACAAGCCATTGCTGTTCTATTCAGGAATTTTTCCCCTGTACCCATATC  100
      |||||||| || | ||||||||||||||||||||||||||||||||||||
seq2  GCACAAGCTATGGATGTTCTATTCAGGAATTTTTCCCCTGTACCCATATC  100

seq1  TTCGAGGCTTTTCCCTACTTTTTCCTCTATAAGTTTCAGTGTCTCTGGTT  150
      |||||||||||||| |||||| ||||||||||||||||||||||||||||
seq2  TTCGAGGCTTTTCCGTACTTTATCCTCTATAAGTTTCAGTGTCTCTGGTT  150

seq1  TTATGTGGAGTTCCTTAATCCACTTAGATTTTACCTTAGTACAAGGAGAT  200
      |||||||||||| ||| ||||| ||||||||  |||||||||||||||||
seq2  TTATGTGGAGTTTCTTCATCCAGTTAGATTTGCCCTTAGTACAAGGAGAT  200

seq1  AGTAATTGATCAATTCACAATCTTCTACATGATAACAGCCAGTTGTGCCA  250
      || ||| ||||||||  || |||||||||||||||| ||||||||||| |
seq2  AGAAATGGATCAATTGGCATTCTTCTACATGATAACCGCCAGTTGTGCGA  250

seq1  GCATGATTTGTTGAAAATGCTGTCTTTTTTTCCACTGGATAGTTTTAGCT  300
      |||  |||||||||||| | |||  ||||||||||||||| |||||||||
seq2  GCACCATTTGTTGAAAAGGTTGT-GTTTTTTCCACTGGATGGTTTTAGCT  299

seq1  CCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATCTCTGGATC  350
      |||||||||||||||||||||||||||||||| |||||||||| ||| | 
seq2  CCCTTGTCAAAGATCAAGTGACCATAGGTGTGGGGGTTCATCTTTGGGTA  349

seq1  TTCAATTCTGTTCCATTGGTCTACTTGTCTGTCGCTATACAAGTACCATG  400
      ||||||| ||||||| |||| || |||||||||| ||||| ||| |||||
seq2  TTCAATTATGTTCCAGTGGTGTAGTTGTCTGTCGGTATACCAGTCCCATG  399

seq1  CAGTTTTTATCACAATTGCTCTGTAGTACAGTTTTAGGTCCGGGATGGTG  450
      ||||||| |||||||||||||||||||||||||||||||||||  |||||
seq2  CAGTTTTGATCACAATTGCTCTGTAGTACAGTTTTAGGTCCGGCGTGGTG  449

seq1  ATTCCACCAGAGGTTCTTTTATCCTTGAG  479
      ||||| |||||||||||||||||| ||||
seq2  ATTCCCCCAGAGGTTCTTTTATCCCTGAG  478

seq1: chrX_131433806_131434665
seq2: B6Ng01-006I20.g_66_924

seq1  GAATTCTTGTGTGCTTGGGAAAGAACCTCTGACTTGAAGCAAAAAAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTGTGCTTGGGAAAGAACCTCTGACTTGAAGCAAAAAAGTTC  50

seq1  TTATTCAAATGTCATTCAAAGAAGACAGGAACTACAATAACAACAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAAATGTCATTCAAAGAAGACAGGAACTACAATAACAACAAAAAA  100

seq1  CAATAGAATATGTAAATTGTATTGGTCACATCCCCAAGAAACCAACCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGAATATGTAAATTGTATTGGTCACATCCCCAAGAAACCAACCACT  150

seq1  ATGTGTTTTAGGTGAAAGGATTTAAACACACACACACACACACACTTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTTTAGGTGAAAGGATTTAAACACACACACACACACACACTTACA  200

seq1  CACTCACACACACATTCATTGTAATTAAATAATAATTAATGCTAATAAAT  250
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CACTCACACACACATTCATTGTAATTAAATAATAATTAATGCTAATAAGT  250

seq1  ACTTGTTCAGTTTATTTTTTTGTCTGTTTATTTGACACAGTGTCTCACTA  300
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTCAGTTTATTTTTTTGTCTGTTTATTTGACACAGTGTCTCACTA  300

seq1  TATAGCCCCGGTTGACCTTAAGTTCACATAGATCCCCCTGTCTCTGCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCCCGGTTGACCTTAAGTTCACATAGATCCCCCTGTCTCTGCCTC  350

seq1  CTTAGGAGTTCTGGGATTAAAAGTATGTGCTGCCACACCTGGCTCTGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGAGTTCTGGGATTAAAAGTATGTGCTGCCACACCTGGCTCTGTTC  400

seq1  AATTTGTCTGTATCCCACTTGGTGTTGAGCAACATTTGTGAGTCCTTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTCTGTATCCCACTTGGTGTTGAGCAACATTTGTGAGTCCTTATC  450

seq1  TGCTATATCTACTGTCAAAAAGGATAAGAAAGGTGACTATGAAGTTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATATCTACTGTCAAAAAGGATAAGAAAGGTGACTATGAAGTTCTGG  500

seq1  CAAACTGTAGGTCAGAAAACCTAGCTTGATTATGGGGAAGGAAGGGGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGTAGGTCAGAAAACCTAGCTTGATTATGGGGAAGGAAGGGGCTT  550

seq1  GGAAAGAATGGGTAGGACGGACCAAGGACTGTACTAGCGTGGGGGAGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAATGGGTAGGACGGACCAAGGACTGTACTAGCGTGGGGGAGAAC  600

seq1  TGAGCAGAGCACAATGATACATGTGTATAAAACTGTCCTAATGAAACTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGAGCACAATGATACATGTGTATAAAACTGTCCTAATGAAACTCA  650

seq1  TTATTTTCTACACCAACTTAAGAAAAACTAACAGTATGAAAGGGAACCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCTACACCAACTTAAGAAAAACTAACAGTATGAAAGGGAACCAA  700

seq1  GAGCCAAGCAGACAAGAGTAAAGTGATTGAGCTATGGTCA-TTAAACTGG  749
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAGCCAAGCAGACAAGAGTAAAGTGATTGAGCTATGGTCATTTAAACTGG  750

seq1  TGTTTTGCAACCATGACAACCCTGCGGATAAGCCTCAGAACATGTTTGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGCAACCATGACAACCCTGCGGATAAGCCTCAGAACATGTTTGTT  800

seq1  TGTTTGTTTGTTTGTTTGTTTTGTTTTGTTGTTTTTGTTTTAAAAGACAG  849
      ||||||||||||||||||||||||||||||| |||   ||||||||||||
seq2  TGTTTGTTTGTTTGTTTGTTTTGTTTTGTTGGTTT--GTTTAAAAGACAG  848

seq1  AGGTAGTAGGC  860
      |||||||||||
seq2  AGGTAGTAGGC  859