BAC Information

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BAC

Clone NameB6Ng01-007B18
Chromosome10 (Build37)1 (Build37)
Map Location 104,053,903 - 104,054,36383,678,428 - 83,679,388
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007B18.bB6Ng01-007B18.g
ACCDH843780DH843781
length928962
definitionDH843780|Mus musculus domesticus DNA, BAC clone: B6Ng01-007B18, 5' end.DH843781|Mus musculus domesticus DNA, BAC clone: B6Ng01-007B18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(83,678,428 - 83,679,388)
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcaggaaaatgcaaatcaaaacaaccgtaagat
tccacctcacaccagtcagaatggctgatatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactactggaggatccagcagtacctctcctgggc
atatatcttgaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcgcacaatatgtactcactgataaatggatattagcccagaaac
ttagaatacccaaggtataagatacaatttgctaaacgcacaaaactgaa
gaagaacgaagaccaaagtgtggacactttgccccttcttagaattggga
acaaaacacccatggaatgagttacagagacaaagtttggagctgagatg
aaaggattgaccatctagagactgccatatctggggatccatcccataat
cagcttccaaatgctgacaccattgcatacactagcaagattttgctgaa
aggacccggatatggctgtctcttgtgaaactatgccggggcctagcaaa
aacagaagtggatgctcactgtcagcta
gaattctcatgaaagggtcatttcagttatttgcatgggtttttgctaaa
cttatcccaaggatattggtcttatccactcaagacatctttgactgctg
gggagagagtgagttttattcagggatgtgggctacacaagctccagtaa
atggtgccatacccgcacatatgtaggaaacattaaatgaacttggtaag
tactgagatgtgggtccaggagatcacatgaagcttggaggaaaactcga
agtgggggcataaaggaagaattggaaagaagaaaggggggttggaattg
atctaaacatattatattcaatcacaagtattaaataaatattaaagaaa
aattaaagtgtgataaaacagggtataaaagggatgtattttttaaaaca
atatgatattcaattagcatatccccgaagacttcctactccaatcagta
tctgggatttttctcacagatttggacagagaagcaaatgttcttgtagg
gtagttttgtagcaagatgctttccttaatgggtgccaatcacagaagga
aacagttaaatgatctgaaagtgaaaacataaaagtatccagcaaaataa
ttgtttctgtattaatttatcagttactggccatgttactagttcctgct
gttcttaaacttactgtctttacctatttgtttgcattttgtatgtgtgc
attactcatatgtatctgttgcaggtgtgaatgcctgcgtgcacatacag
aggctagaggaagatatagagtgccttcttccatcagtctccctcattcc
ttttagactaggtctctcactgaattttgactagatttggcagctttcag
actcagagtcatattttttggttgtgagcctagcctttaacggctgagtc
atctctccagcccaagaaagtaatcaaggagctaaagggaactgcaccct
aatggtggaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-007B18.b_41_511 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          ||||||||||||||||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||| |||||||  ||||||||||||| ||||||| ||||||||||||| 
seq2  TGGGACATCTTCAAGATATATGCCCAGGAGAGGTACTGCTGGATCCTCCA  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| ||||| |||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCACCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||| |||||||||||||||||||||||||||||| | |||||
seq2  TCCACATCCTCACCAGCATCTGCTGTCACCTGAATTTTTGATATCAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      ||||||||||||||||||||||||| | |||||||||||||||||||| |
seq2  TTCTGACTGGTGTGAGGTGGAATCTTACGGTTGTTTTGATTTGCATTTTC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471

seq1: chr1_83678428_83679388
seq2: B6Ng01-007B18.g_67_1028 (reverse)

seq1  TGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGATTACTTTCTT  50
      |||||||||  ||||| ||||| |||||||||||||||||||||||||||
seq2  TGTTCCACCATTAGGG-TGCAGTTCCCTTTAGCTCCTTGATTACTTTCTT  49

seq1  GGGCTGGAGAGATGACTCAGCCGTTAAAGGCTAGGCTCACAACC-AAAAA  99
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGGCTGGAGAGATGACTCAGCCGTTAAAGGCTAGGCTCACAACCAAAAAA  99

seq1  TATGACTCTGAGTCTTGAAAGCTGCC-AATCTAGTTCAAATTCAGTGAGA  148
      |||||||||||||| ||||||||||| ||||||||  |||||||||||||
seq2  TATGACTCTGAGTC-TGAAAGCTGCCAAATCTAGTCAAAATTCAGTGAGA  148

seq1  GACCTAGTCTAAAAGGAATGAGGGAGACTGATGGAAGAAGGCACTCTATA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAGTCTAAAAGGAATGAGGGAGACTGATGGAAGAAGGCACTCTATA  198

seq1  TCTTCCTCTAGCCTCTGTATGTGCACGCAGGCATTCACACCTGCAACAGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCTAGCCTCTGTATGTGCACGCAGGCATTCACACCTGCAACAGA  248

seq1  TACATATGAGTAATGCACACATACAAAATGCAAACAAATAGGTAAAGACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATGAGTAATGCACACATACAAAATGCAAACAAATAGGTAAAGACA  298

seq1  GTAAG-TTAAGAACAGCAGGAACTAGTAACATGGCCAGTAACTGATAAAT  347
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTTTAAGAACAGCAGGAACTAGTAACATGGCCAGTAACTGATAAAT  348

seq1  TAATACAGAAACAATTATTTTGCTGGATACTTTTATGTTTTCACTTTCAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACAGAAACAATTATTTTGCTGGATACTTTTATGTTTTCACTTTCAG  398

seq1  ATCATTTAACTGTTTCCTTCTGTGATTGGCACCCATTAAGGAAAGCATCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTAACTGTTTCCTTCTGTGATTGGCACCCATTAAGGAAAGCATCT  448

seq1  TGCTACAAAACTACCCTACAAGAACATTTGCTTCTCTGTCCAAATCTGTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACAAAACTACCCTACAAGAACATTTGCTTCTCTGTCCAAATCTGTG  498

seq1  AGAAAAATCCCAGATACTGATTGGAGTAGGAAGTCTTCGGGGATATGCTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATCCCAGATACTGATTGGAGTAGGAAGTCTTCGGGGATATGCTA  548

seq1  ATTGAATATCATATTGTTTTAAAAAATACATCCCTTTTATACCCTGTTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATATCATATTGTTTTAAAAAATACATCCCTTTTATACCCTGTTTT  598

seq1  ATCACACTTTAATTTTTCTTTAATATTTATTTAATACTTGTGATTGAATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACTTTAATTTTTCTTTAATATTTATTTAATACTTGTGATTGAATA  648

seq1  TAATATGTTTAGATCAATTCCAACCCCCCTTTCTTCTTTCCAATTCTTCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGTTTAGATCAATTCCAACCCCCCTTTCTTCTTTCCAATTCTTCC  698

seq1  TTTATGCCCCCACTTCGAGTTTTCCTCCAAGCTTCATGTGATCTCCTGGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCCCCCACTTCGAGTTTTCCTCCAAGCTTCATGTGATCTCCTGGA  748

seq1  CCCACATCTCAGTACTTACCAAGTTCATTTAATGTTTCCTACATATGTGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATCTCAGTACTTACCAAGTTCATTTAATGTTTCCTACATATGTGC  798

seq1  GGGTATGGCACCATTTACTGGAGCTTGTGTAGCCCACATCCCTGAATAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATGGCACCATTTACTGGAGCTTGTGTAGCCCACATCCCTGAATAAA  848

seq1  ACTCACTCTCTCCCCAGCAGTCAAAGATGTCTTGAGTGGATAAGACCAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTCTCTCCCCAGCAGTCAAAGATGTCTTGAGTGGATAAGACCAAT  898

seq1  ATCCTTGGGATAAGTTTAGCAAAAACCCATGCAAATAACTGAAATGACCC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGGGATAAGTTTAGCAAAAACCCATGCAAATAACTGAAATGACCC  948

seq1  TTTCATGAGAATTC  961
      ||||||||||||||
seq2  TTTCATGAGAATTC  962