BAC Information

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BAC

Clone NameB6Ng01-007P17
Chromosome10 (Build37)
Map Location 37,586,517 - 37,692,019
singlet/doubletdoublet
Overlap genenone
Upstream geneHdac2, Marcks, LOC100040846
Downstream geneLOC100040915, Lama4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007P17.bB6Ng01-007P17.g
ACCDH844396DH844397
length1,0721,089
definitionDH844396|Mus musculus domesticus DNA, BAC clone: B6Ng01-007P17, 5' end.DH844397|Mus musculus domesticus DNA, BAC clone: B6Ng01-007P17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,690,944 - 37,692,019)(37,586,517 - 37,587,621)
sequence
gaattcaccaatgaatttacatggatttttgatataacttgcatctatca
tgacttccaatggtatcatagttaagatttcattgctgtgaagagatacc
atgatcaaggcaacctttacaaaggcaaacactaaataaggtctatctta
aaattttagaaatttagtccattatcatcatcattgtggagaacatggcg
gcatgcaggcatacatagtgctggaggagccaagagtctacatcttgatc
tgaaggcagccaagagactgtcatcagcactagatagagaagacctcaat
ctccaaccactatgatacactttctctaatgaggacacacatactctaac
aagcccatacctcctaatagtgccactccctgtgggttaaccattcagac
atatgaatctatgcaaaccaacaaaagtagtaacaaggagtctgagttct
agttttcataatctttctttcatctatcttcatgtcgcaagactgtgaaa
attgactgtaaattagatgcttctactcctatttcactagctggaagaac
ttatcccaagaaaacacaggactccatccttaggctccttgtcattggat
tattgccaaagggtattagtaaagagcagcttacaacctgttggaggtct
agaatgagtgtggccatccttgtctcatccctgaagacaactctgggatg
gcagaggctggggagttttagagagggttgtggaaacaagatcattttac
ccagttaccccagactatcagccccatctatgaggagaatgttattctaa
tcactgagataaaaaaaaaaatcaactttaaatttaactaaaaaaaaaaa
aatacacaacaaaaaccaaacaacaacaacaacaacaaaaacaagggaaa
ataggtgaaaactttaatcagatttaagcaaatatccatgtctgtgacta
acttactttcatgatttatttatttgtcatttgaaaaaaaaagtactgaa
gttttttttttttttttttaacatttctgggcccttatgatgtgtataaa
aaaaacaaaggagcaaaagaaa
gaattctgcataattaaaagataaaacttttaaataattatgaagactat
taccagataaattctatgaaaacaggctcttttaaggtgaaagttaaaca
tttcgaatgcaaattaagacataattattgataaattgaaatctcccatt
atattaagacataatggcattttctatgttacagaaatatatgaaatcaa
attacaacattggtgtggaattttggttatggttcaaatattccagatgt
aaaaaagaaaatctgtcaaattgaggcaaaaatacaaatcattaatttgc
aaacatatccctgaaacactggaaaggattttgatgtcatgcctgcatgt
taattacagagttgctacaagtaacacctcctattatttactatgtatta
atacatttcaataaaataacagttgtttaaatgtagatagttttaaagta
attgaaaattttgtttagctctcctgtgcctaaggttcacctttcagtag
atattctgttttatacacaagagagttaagaaccagagaagtttaagttg
tctgtacactatccatagctgttgaattctacagcatgggttggccagtt
ccctaaagtaaacaattggatattaattaaataagaaggagatacacatt
cttttcttaattcactttacatcctgcccactgccactctctagatcaca
tcctcctcctcttctgctctgcatggatggctaccgtctgggtatccccc
aaccctgcaggactagccacatcttctcccactgaggccagacaaggcag
acccgctagaagaatatttcccatatacacctttgagtataggccctgct
ccagttgttcaggaccaacatgatgaccaagctgcacatctgtgacacgc
agcctgtgtatgttttttggtggtggtcagatgtcagaacccaagttacc
agttagtgactctactgtcttcagtgtgttcttatcacttgggcccaaat
ctttccctgcttttctgtaagagtcagttgaagagcaacaatatcaacaa
caataaacccccaccctccaccctggaacttacaaagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_37690944_37692019
seq2: B6Ng01-007P17.b_48_1119 (reverse)

seq1  TTTCTTTT--TTTTTTTTTTTTTTATTTCACATCATTAGGGCTCAGAAAT  48
      ||||||||  |  ||| |||||||  | |||||||| ||||| |||||||
seq2  TTTCTTTTGCTCCTTTGTTTTTTTTATACACATCATAAGGGCCCAGAAAT  50

seq1  GTTAAAAAAAAAAAAAAAAAAAAACTTCAAGTACTTTTTTTTTTCAAATT  98
      |||   |||||||||||||||||||||| ||||| ||||||||||||| |
seq2  GTT---AAAAAAAAAAAAAAAAAACTTC-AGTAC-TTTTTTTTTCAAA-T  94

seq1  GACAAATAAATAAATCCATGAAAGTAAGTTAGTCACAGACATGGATATTT  148
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GACAAATAAATAAAT-CATGAAAGTAAGTTAGTCACAGACATGGATATTT  143

seq1  GCTTAAATCTGATTAAAGTTTTCACCTATTTT-CCTTGTTTTTGTTGTTG  197
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCTTAAATCTGATTAAAGTTTTCACCTATTTTCCCTTGTTTTTGTTGTTG  193

seq1  TTGTTGTTGTTTGGTTTTTGTTGTGTATTTTTTTTTTTTTAGTTAAATTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTGTTTGGTTTTTGTTGTGTATTTTTTTTTTTTTAGTTAAATTT  243

seq1  AAAGTTGATTTTTTTTTTTATCTCAGTGATTAGAATAACATTCTCCTCAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGATTTTTTTTTTTATCTCAGTGATTAGAATAACATTCTCCTCAT  293

seq1  AGATGGGGCTGATAGTCTGGGGTAACTGGGTAAAATGATCTTGTTTCCAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGGCTGATAGTCTGGGGTAACTGGGTAAAATGATCTTGTTTCCAC  343

seq1  AACCCTCTCTAAAACTCCCCAGCCTCTGCCATCCCAGAGTTGTCTTCAGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTCTCTAAAACTCCCCAGCCTCTGCCATCCCAGAGTTGTCTTCAGG  393

seq1  GATGAGACAAGGATGGCCACACTCATTCTAGACCTCCAACAGGTTGTAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGACAAGGATGGCCACACTCATTCTAGACCTCCAACAGGTTGTAAG  443

seq1  CTGCTCTTTACTAATACCCTTTGGCAATAATCCAATGACAAGGAGCCTAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTTTACTAATACCCTTTGGCAATAATCCAATGACAAGGAGCCTAA  493

seq1  GGATGGAGTCCTGTGTTTTCTTGGGATAAGTTCTTCCAGCTAGTGAAATA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAGTCCTGTGTTTTCTTGGGATAAGTTCTTCCAGCTAGTGAAATA  543

seq1  GGAGTAGAAGCATCTAATTTACAGTCAATTTTCACAGTCTTGCGACATGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAGAAGCATCTAATTTACAGTCAATTTTCACAGTCTTGCGACATGA  593

seq1  AGATAGATGAAAGAAAGATTATGAAAACTAGAACTCAGACTCCTTGTTAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATGAAAGAAAGATTATGAAAACTAGAACTCAGACTCCTTGTTAC  643

seq1  TACTTTTGTTGGTTTGCATAGATTCATATGTCTGAATGGTTAACCCACAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTGTTGGTTTGCATAGATTCATATGTCTGAATGGTTAACCCACAG  693

seq1  GGAGTGGCACTATTAGGAGGTATGGGCTTGTTAGAGTATGTGTGTCCTCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGCACTATTAGGAGGTATGGGCTTGTTAGAGTATGTGTGTCCTCA  743

seq1  TTAGAGAAAGTGTATCATAGTGGTTGGAGATTGAGGTCTTCTCTATCTAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAAAGTGTATCATAGTGGTTGGAGATTGAGGTCTTCTCTATCTAG  793

seq1  TGCTGATGACAGTCTCTTGGCTGCCTTCAGATCAAGATGTAGACTCTTGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGATGACAGTCTCTTGGCTGCCTTCAGATCAAGATGTAGACTCTTGG  843

seq1  CTCCTCCAGCACTATGTATGCCTGCATGCCGCCATGTTCTCCACAATGAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCAGCACTATGTATGCCTGCATGCCGCCATGTTCTCCACAATGAT  893

seq1  GATGATAATGGACTAAATTTCTAAAATTTTAAGATAGACCTTATTTAGTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATAATGGACTAAATTTCTAAAATTTTAAGATAGACCTTATTTAGTG  943

seq1  TTTGCCTTTGTAAAGGTTGCCTTGATCATGGTATCTCTTCACAGCAATGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTTGTAAAGGTTGCCTTGATCATGGTATCTCTTCACAGCAATGA  993

seq1  AATCTTAACTATGATACCATTGGAAGTCATGATAGATGCAAGTTATATCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTAACTATGATACCATTGGAAGTCATGATAGATGCAAGTTATATCA  1043

seq1  AAAATCCATGTAAATTCATTGGTGAATTC  1076
      |||||||||||||||||||||||||||||
seq2  AAAATCCATGTAAATTCATTGGTGAATTC  1072

seq1: chr10_37586517_37587621
seq2: B6Ng01-007P17.g_68_1156

seq1  GAATTCTGCATAATTAAAAGATAAAACTTTTAAATAATTATGAAGACTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCATAATTAAAAGATAAAACTTTTAAATAATTATGAAGACTAT  50

seq1  TACCAGATAAATTCTATGAAAACAGGCTCTTTTAAGGTGAAAGTTAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGATAAATTCTATGAAAACAGGCTCTTTTAAGGTGAAAGTTAAACA  100

seq1  TTTCGAATGCAAATTAAGACATAATTATTGATAAATTGAAATCTCCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGAATGCAAATTAAGACATAATTATTGATAAATTGAAATCTCCCATT  150

seq1  ATATTAAGACATAATGGCATTTTCTATGTTACAGAAATATATGAAATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAGACATAATGGCATTTTCTATGTTACAGAAATATATGAAATCAA  200

seq1  ATTACAACATTGGTGTGGAATTTTGGTTATGGTTCAAATATTCCAGATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAACATTGGTGTGGAATTTTGGTTATGGTTCAAATATTCCAGATGT  250

seq1  AAAAAAGAAAATCTGTCAAATTGAGGCAAAAATACAAATCATTAATTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAAATCTGTCAAATTGAGGCAAAAATACAAATCATTAATTTGC  300

seq1  AAACATATCCCTGAAACACTGGAAAGGATTTTGATGTCATGCCTGCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATATCCCTGAAACACTGGAAAGGATTTTGATGTCATGCCTGCATGT  350

seq1  TAATTACAGAGTTGCTACAAGTAACACCTCCTATTATTTACTATGTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACAGAGTTGCTACAAGTAACACCTCCTATTATTTACTATGTATTA  400

seq1  ATACATTTCAATAAAATAACAGTTGTTTAAATGTAGATAGTTTTAAAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTCAATAAAATAACAGTTGTTTAAATGTAGATAGTTTTAAAGTA  450

seq1  ATTGAAAATTTTGTTTAGCTCTCCTGTGCCTAAGGTTCACCTTTCAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAATTTTGTTTAGCTCTCCTGTGCCTAAGGTTCACCTTTCAGTAG  500

seq1  ATATTCTGTTTTATACACAAGAGAGTTAAGAACCAGAGAAGTTTAAGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTGTTTTATACACAAGAGAGTTAAGAACCAGAGAAGTTTAAGTTG  550

seq1  TCTGTACACTATCCATAGCTGTTGAATTCTACAGCATGGGTTGGCCAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACACTATCCATAGCTGTTGAATTCTACAGCATGGGTTGGCCAGTT  600

seq1  CCCTAAAGTAAACAATTGGATATTAATTAAATAAGAAGGAGATACACATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAAGTAAACAATTGGATATTAATTAAATAAGAAGGAGATACACATT  650

seq1  CTTTTCTTAATTCACTTTACATCCTGCCCACTGCCACTCTCTAGATCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTAATTCACTTTACATCCTGCCCACTGCCACTCTCTAGATCACA  700

seq1  TCCTCCTCCTCTTCTGCTCTGCATGGATGGCTACCGTCTGGGTATCCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTCTTCTGCTCTGCATGGATGGCTACCGTCTGGGTATCCCCC  750

seq1  AACCCTGCAGGACTAGCCACATCTTCTCCCACTGAGGCCAGACAAGGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGCAGGACTAGCCACATCTTCTCCCACTGAGGCCAGACAAGGCAG  800

seq1  ACCCGCTAGAAGAATATTTCCCATATACACCTTTGAGTATAGGCCCTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGCTAGAAGAATATTTCCCATATACACCTTTGAGTATAGGCCCTGCT  850

seq1  CCAGTTGTTCAGGACCAACATGATGACCAAGCTGCACATCTGTGACACGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGTTCAGGACCAACATGATGACCAAGCTGCACATCTGTGACACGC  900

seq1  AGCCTGTGTATGTTTTTTGGTTGGTGGTTCAGATGTCAGAACCCCAAGTT  950
      |||||||||||||||||||| |||||| ||||||||||||| ||||||||
seq2  AGCCTGTGTATGTTTTTTGG-TGGTGG-TCAGATGTCAGAA-CCCAAGTT  947

seq1  ACCAGGTTAGTTGACTCTACTGTTCTTCCAGTGGTGTTCTTATCCACTTT  1000
      |||| ||||| ||||||||||| |||| |||| |||||||||| ||||| 
seq2  ACCA-GTTAG-TGACTCTACTG-TCTT-CAGT-GTGTTCTTAT-CACTT-  990

seq1  GGGGCCCAAAATCCTTTCCCCTGCTCTTCTGTAAGAGTCAGTATGGAAGA  1050
       |||||| |||||  || ||||||| |||||||||||||||  | |||||
seq2  -GGGCCC-AAATC--TTTCCCTGCTTTTCTGTAAGAGTCAG--TTGAAGA  1034

seq1  ACAACAATATCAACAACAATAAAACCCCCACCC-CCACCCTGAACCTACC  1099
       ||||||||||||||||||| |||||||||||| |||||||| | ||  |
seq2  GCAACAATATCAACAACAAT-AAACCCCCACCCTCCACCCTGGAACTTAC  1083

seq1  AAAGAG  1105
      ||||||
seq2  AAAGAG  1089