BAC Information

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BAC

Clone NameB6Ng01-008D19
Chromosome10 (Build37)
Map Location 15,153,808 - 15,304,756
singlet/doubletdoublet
Overlap geneLOC637043
Upstream geneGpr126, LOC100039571, LOC100039409, Vta1, D230044M03Rik, EG666904, Nmbr, LOC666917
Downstream geneLOC100039492, LOC671439, LOC382457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008D19.bB6Ng01-008D19.g
ACCDH844562DH844563
length1,0701,092
definitionDH844562|Mus musculus domesticus DNA, BAC clone: B6Ng01-008D19, 5' end.DH844563|Mus musculus domesticus DNA, BAC clone: B6Ng01-008D19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,303,709 - 15,304,756)(15,153,808 - 15,154,908)
sequence
gaattccaccttcttgagttctttatatatgttggatattagttccctat
ctgatttaggataggtaaagatcctttcccaatctgttggtggtcttttt
gtcttattgacggtgtcttttgccttgcagaaactttggagtttcattag
gtcccatttgtcaattctcgatcttacagcacaagccattgctgttctgt
aaatgctattttcttcttttttttttttttggtgtatttaatttttagta
tatattgactgtgtatcttgacaatctaataaatcagtttgttaattatt
cccaatttagggggtcattttaattttataattttataagttagatgaca
tttatgtgagaaagtaagaaaaagatgtgaacttcagattcaattcaaga
atgtgttttcatttgagaagcatgggggtgaagaatatgcaggaggtagc
attacatttgctgtaagattcatgcatttgcttacagcttccaaggtatg
tttctcagtagcagtttttcacagcactcagattacaaacatactgactt
ttaatctctctctctctctctctaatgcaatactttatttacttacattt
caaatgttttcccctttcccagtctcccctccataagccccctatcccct
ccttccccacccaccaactcccaactccctgccctggcattcccctacac
tggggcattgagccttcatgacctatcctcccattgatgcctgacaaggc
cagcctctactatatatgcaactggaccatgattcactcaatgtgtaatc
tttgtttggtggtttactccctgggagctccaggggggcggggggtctga
ttggttgatattgttgttctttcctatgggtgcaaccccttcagctcttc
agtcctttctctaactcctccattggggaccctgtgctcagtccaatggt
tggctgctagcatctgctctgtatctgacagatctggcagaagcctctca
gagatagctaatatcaggctcttatcagcaagcactcactgcatcaaata
gagtcttagtttagtgtctc
gaattcaagcacaccacacacacacacacacacacacacacagagagaga
gagagagagagagagagagagagagagagagagagagagagagagagaga
gagacatgagagagagagagagagagagagagagagagacatgagagaga
gagagagagagagagagagagagagaatgagaattaagtcttttcgtaaa
caaaccattaattgttggagacttcacactcacattagatctatgttcaa
aagacaaagcgttcctgggattaaaatgaagtcttcaggaaaaaaaaaaa
cttaagatcataatcaaggcacatatttttaaaaaccagctaacagttct
tctgagagtgttcccagcaggattaaatgttacaggccaatggctttcag
ccaatcccttttaatggagaaatatttataagaattcaacagactatctt
atttatccatttatttactaacttgaataatatttagctgatcaggaaac
tattaggtttattttaattcatgcaattatttatgtatcttgctatttcc
attaattaaatttgggaagccacgaattagtgtagaatcaatgtcacctt
tttttgtctgttgtgttattggacaaaatttgaagctcatttgatttgga
atctaggaggtatagttctaaggatgagagcatattaggaagactagata
accagaaacacagacatggcttttatttataattcacttaagtttttaaa
agtgttcaaagtacaactcccactttgtttgcagctttctgtactattgc
atctgatttgcgtatgggtaaaatgagccaaatcgaccactactcataaa
cacaaaccagtatgaattttcctgtgattccttttatgccagcactgtag
acacacatgctgaggtagaggaccaccagttctctattctgcatcttcac
aatgcagtgagtaaatgctgggacgtcatcctctttaacaggcctcagaa
ggtgcaaaaagttttttggttgagccactagaatgggagttaatattttt
ttctggcatatacttagtctaccggtaaggggagatgttgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_15303709_15304756
seq2: B6Ng01-008D19.b_79_1119 (reverse)

seq1  GAGACACAAAACCTAGACTCTATTGTGGATGCCAGTGAGTGCTTGCTGAT  50
      ||||||| ||||  |||||||||  | |||| ||||||||||||||||||
seq2  GAGACACTAAACTAAGACTCTAT--TTGATG-CAGTGAGTGCTTGCTGAT  47

seq1  AAGAGCCTGATA-TAGCTATCTCCTGAGAGGC-TCTGCCAGATCCTGTCA  98
      |||||||||||| ||||||||| ||||||||| |||||||||| ||||||
seq2  AAGAGCCTGATATTAGCTATCT-CTGAGAGGCTTCTGCCAGAT-CTGTCA  95

seq1  GATACAGAGGCAGATGCTAGCAGCCAACCATTGGACTGAGCACAGGGTCC  148
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGA-GCAGATGCTAGCAGCCAACCATTGGACTGAGCACAGGGTCC  144

seq1  CCAATGGAGGAGTTAGAGAAAGGACTGAAGGAGCTGAAGGGGTTTGCAAC  198
      ||||||||||||||||||||||||||||| |||||||||||| |||| ||
seq2  CCAATGGAGGAGTTAGAGAAAGGACTGAA-GAGCTGAAGGGG-TTGC-AC  191

seq1  CCATAGG-AAGAACAACAATATCAACCAATCAGACCCCCCGCCCCCCTGG  247
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGGAAAGAACAACAATATCAACCAATCAGACCCCCCGCCCCCCTGG  241

seq1  AGCTCCCAGGGAGTAAACCACCAAACAAAGATTACACATTGAGTGAATCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCCAGGGAGTAAACCACCAAACAAAGATTACACATTGAGTGAATCA  291

seq1  TGGTCCAGTTGCATATATAGTAGAGGCTGGCCTTGTCAGGCATCAATGGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCAGTTGCATATATAGTAGAGGCTGGCCTTGTCAGGCATCAATGGG  341

seq1  AGGATAGGTCATGAAGGCTCAATGCCCCAGTGTAGGGGAATGCCAGGGCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGGTCATGAAGGCTCAATGCCCCAGTGTAGGGGAATGCCAGGGCA  391

seq1  GGGAGTTGGGAGTTGGTGGGTGGGGAAGGAGGGGATAGGGGGCTTATGGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTGGGAGTTGGTGGGTGGGGAAGGAGGGGATAGGGGGCTTATGGA  441

seq1  GGGGAGACTGGGAAAGGGGAAAACATTTGAAATGTAAGTAAATAAAGTAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGACTGGGAAAGGGGAAAACATTTGAAATGTAAGTAAATAAAGTAT  491

seq1  TGCATTAGAGAGAGAGAGAGAGAGATTAAAAGTCAGTATGTTTGTAATCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTAGAGAGAGAGAGAGAGAGATTAAAAGTCAGTATGTTTGTAATCT  541

seq1  GAGTGCTGTGAAAAACTGCTACTGAGAAACATACCTTGGAAGCTGTAAGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTGTGAAAAACTGCTACTGAGAAACATACCTTGGAAGCTGTAAGC  591

seq1  AAATGCATGAATCTTACAGCAAATGTAATGCTACCTCCTGCATATTCTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCATGAATCTTACAGCAAATGTAATGCTACCTCCTGCATATTCTTC  641

seq1  ACCCCCATGCTTCTCAAATGAAAACACATTCTTGAATTGAATCTGAAGTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCATGCTTCTCAAATGAAAACACATTCTTGAATTGAATCTGAAGTT  691

seq1  CACATCTTTTTCTTACTTTCTCACATAAATGTCATCTAACTTATAAAATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTTTTTCTTACTTTCTCACATAAATGTCATCTAACTTATAAAATT  741

seq1  ATAAAATTAAAATGACCCCCTAAATTGGGAATAATTAACAAACTGATTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTAAAATGACCCCCTAAATTGGGAATAATTAACAAACTGATTTA  791

seq1  TTAGATTGTCAAGATACACAGTCAATATATACTAAAAATTAAATACACCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTAGATTGTCAAGATACACAGTCAATATATACTAAAAATTAAATACACC-  840

seq1  AAAAAAAAAAAAAAGAAGAAAATAGCATTTACAGAACAGCAATGGCTTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAGAAGAAAATAGCATTTACAGAACAGCAATGGCTTGT  890

seq1  GCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTT  940

seq1  CTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATT  990

seq1  GGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGAACTAATATCCAAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGAACTAATATCCAAC  1040

seq1  A  1048
      |
seq2  A  1041

seq1: chr10_15153808_15154908
seq2: B6Ng01-008D19.g_67_1158

seq1  GAATTCAAGCACACCACACACACACACACACACACACACACAGAGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCACACCACACACACACACACACACACACACACAGAGAGAGA  50

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  100

seq1  GAGACATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACATGAGAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACATGAGAGAGA  150

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAATGAGAATTAAGTCTTTTCGTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAATGAGAATTAAGTCTTTTCGTAAA  200

seq1  CAAACCATTAATTGTTGGAGACTTCACACTCACATTAGATCTATGTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCATTAATTGTTGGAGACTTCACACTCACATTAGATCTATGTTCAA  250

seq1  AAGACAAAGCGTTCCTGGGATTAAAATGAAGTCTTCAGGAAAAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAAGCGTTCCTGGGATTAAAATGAAGTCTTCAGGAAAAAAAAAAA  300

seq1  CTTAAGATCATAATCAAGGCACATATTTTTAAAAACCAGCTAACAGTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGATCATAATCAAGGCACATATTTTTAAAAACCAGCTAACAGTTCT  350

seq1  TCTGAGAGTGTTCCCAGCAGGATTAAATGTTACAGGCCAATGGCTTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAGTGTTCCCAGCAGGATTAAATGTTACAGGCCAATGGCTTTCAG  400

seq1  CCAATCCCTTTTAATGGAGAAATATTTATAAGAATTCAACAGACTATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCCCTTTTAATGGAGAAATATTTATAAGAATTCAACAGACTATCTT  450

seq1  ATTTATCCATTTATTTACTAACTTGAATAATATTTAGCTGATCAGGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCCATTTATTTACTAACTTGAATAATATTTAGCTGATCAGGAAAC  500

seq1  TATTAGGTTTATTTTAATTCATGCAATTATTTATGTATCTTGCTATTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGTTTATTTTAATTCATGCAATTATTTATGTATCTTGCTATTTCC  550

seq1  ATTAATTAAATTTGGGAAGCCACGAATTAGTGTAGAATCAATGTCACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTAAATTTGGGAAGCCACGAATTAGTGTAGAATCAATGTCACCTT  600

seq1  TTTTTGCCTGTTGTGTTATTGGACAAAATTTGAAGCTCATTTGATTTGGA  650
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTCTGTTGTGTTATTGGACAAAATTTGAAGCTCATTTGATTTGGA  650

seq1  ATCTAGGAGGTATAGTTCTAAGGATGAGAGCATATTAGGAAGACTAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGAGGTATAGTTCTAAGGATGAGAGCATATTAGGAAGACTAGATA  700

seq1  ACCAGAAACACAGACATGGCTTTTATTTATAATTCACTTAAGTTTTTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAACACAGACATGGCTTTTATTTATAATTCACTTAAGTTTTTAAA  750

seq1  AGTGTTCAAAGTACAACTCCCAC-TTGTTTGCAGCTTTCTGTACTATTGC  799
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGTGTTCAAAGTACAACTCCCACTTTGTTTGCAGCTTTCTGTACTATTGC  800

seq1  ATCTGATTTGCGTATGGGTAAAATGAGCCAAATCGACCACTTACTCATAA  849
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATCTGATTTGCGTATGGGTAAAATGAGCCAAATCGACCAC-TACTCATAA  849

seq1  ACAACAAAACCAGTATGAATTTTCCTGTGATTCCTTTATCGCCAGCACTG  899
      |||   |||||||||||||||||||||||||||||||   ||||||||||
seq2  ACA--CAAACCAGTATGAATTTTCCTGTGATTCCTTTTATGCCAGCACTG  897

seq1  TAGACACACATGCTGAGGTAGAGGAACCACCAGTTCCTCTACTCCTGCAT  949
      |||||||||||||||||||||||| |||||||||| ||||| | ||||||
seq2  TAGACACACATGCTGAGGTAGAGG-ACCACCAGTT-CTCTA-TTCTGCAT  944

seq1  CTTCACCATTGCAGTTGAGTAAATTGCTGGGACAGTCA-CCTCTTTAACA  998
      ||||| || ||||| |||||||| ||||||||| |||| |||||||||||
seq2  CTTCA-CAATGCAG-TGAGTAAA-TGCTGGGAC-GTCATCCTCTTTAACA  990

seq1  GGCCTCAGAA-GTGCAGAAAGTTTTTTTGGTTGAGGCACCTAG-ATGTGA  1046
      |||||||||| ||||| |||| ||||||||||||| || |||| ||| ||
seq2  GGCCTCAGAAGGTGCAAAAAG-TTTTTTGGTTGAGCCA-CTAGAATGGGA  1038

seq1  GTATATATTTTTTTCTGCATTATAACTTAGTCTA-CTGTGATGGGAGAAT  1095
      ||  |||||||||||||   ||| |||||||||| | || | ||||| ||
seq2  GTTAATATTTTTTTCTGGCATAT-ACTTAGTCTACCGGTAAGGGGAG-AT  1086

seq1  GTTGCA  1101
      ||||||
seq2  GTTGCA  1092