BAC Information

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BAC

Clone NameB6Ng01-008G01
Chromosome10 (Build37)
Map Location 48,097,219 - 48,098,214
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042387, LOC100041663, LOC100042398
Downstream geneLOC546562, LOC100041689, Grik2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008G01.bB6Ng01-008G01.g
ACCDH844655DH844656
length9961,186
definitionDH844655|Mus musculus domesticus DNA, BAC clone: B6Ng01-008G01, 5' end.DH844656|Mus musculus domesticus DNA, BAC clone: B6Ng01-008G01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcagcatctcctgaaggatatacctgaagttcttgggaacatt
tctttttctcaaagtgaaggtgggaaattatgcaaactagtatagtatta
caaaaggcagtattgaaaatcttcaaaacagtcaaacagaactagtcatg
actcagatcatgactaaatgttttatcctgctgtagtacgtatctagaaa
atcatgtttattgtttctttattcacaaaagcattaatgagaacataata
gatatccagttatagaggagagaatggtgctaatcttgcatatgtacacc
attgaattttaattacctgtaatggaaaaagaaaaaattcaaatttaccg
aatgttaatggaactaaagtatacagtgtcccatactcaaaacgataaca
acaccaagttctctttatgtgcacattccacattaaactttttatatgta
tataaattaattgatataattatttataaaactaaaattgtagacaggaa
atgaaggtagaaatagagagatgtcagagaaaaagttggagatttaaagc
aggaaataacataaaaaaagaatgaaaatcaaaataaataacaaataagt
atggcagactaggagagcagaggaggagaagaggaaaggagatgaggtca
actgctcagccactaaaatcaatgacttcatgtaattcccaggcaaatgg
atggaagtagaaaatatcataagtgaggtaacacagtcaaaaaagaacac
acattgtttgtattcactattaagtggatattaggacaatagctcagaat
atttatcattaaatttacagaccatatgaaggtcaaaaagaagggagagc
aatgtatggatgcctcagtcctacttagtaaagagaacaaaatcacccac
aggaggtagagaatgtgcagacttgggaggaagttgggacagagaaagga
gaaaaaaagagaaggatgatcatgtgtgggtggaaatgggggagat
gccctttagaggagccatcagtaaacaccagaacagcattgtgtaagggt
tgtaaagaggttatattagaaaatatcacctcatgtacattcaaaaattt
tatcaacctaccttgaaggtagtggctgtctatagttcagttaaacccta
tttgagcaagcaaccaatctgtactatgctgtttcagccaagtgtcttga
cttacactgtaaggctgaacaataatatctggctctttgccaaaataagt
tagtgcctgctgaaagaaagatgaaatttcaagacctataagtcatataa
agtactcagaaattgctggttgtttgtgagcctagaggctgcctgggact
gaggacaaagaagaacaaacccgggaatgccctgtagtaataaaagcatt
cctggaaacagcttgaccataaagataaagaggaatgtgaggacataaga
gggctatctgaactgagtcaacaaccatctggctcagcacctccctctgc
ccattgccctttgatgcagtttaaagtctaaactgaccaaatactctgct
agtattgataaacatccaactcacagaactcctgcacatattcttttgct
gctgacaccttgacctgcacgtacatataatttttctgctgatgtttgaa
taagtcaatggtgcattgctatgctgaattccccacccctgagcccttta
ccacataaaaacccctagctttcgagccttggggtcgaatccactgtctc
ctgcgtgagatgtttcgactcagagctccgtaattaaactacctcgtgtg
tttacagcaagaaaggattctcgtgtttctttgggtgctctatctctctc
gagactagagtgggggggtccccaaaagggggtcttacactgcttccttc
caatgataattatctgggctctgggctactgcttcatatatggcagatat
tgcatttaagaaaatctcaaatgtatcacattagaggagactttgccata
caccctgtagcacatgatcatattaaaatacagtgtaagcaagagtatct
aagtagtgacaaatgttcttcaatagctttcccacttgtttgtaggccag
catcttctgaagtagaggataaggagagatcgatcctgaattcattaagt
tcacttctctgtgaatgtgagtattaataatagcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_48097219_48098214
seq2: B6Ng01-008G01.b_43_1038

seq1  GAATTCTGCAGCATCTCCTGAAGGATATACCTGAAGTTCTTGGGAACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCAGCATCTCCTGAAGGATATACCTGAAGTTCTTGGGAACATT  50

seq1  TCTTTTTCTCAAAGTGAAGGTGGGAAATTATGCAAACTAGTATAGTATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCTCAAAGTGAAGGTGGGAAATTATGCAAACTAGTATAGTATTA  100

seq1  CAAAAGGCAGTATTGAAAATCTTCAAAACAGTCAAACAGAACTAGTCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGCAGTATTGAAAATCTTCAAAACAGTCAAACAGAACTAGTCATG  150

seq1  ACTCAGATCATGACTAAATGTTTTATCCTGCTGTAGTACGTATCTAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGATCATGACTAAATGTTTTATCCTGCTGTAGTACGTATCTAGAAA  200

seq1  ATCATGTTTATTGTTTCTTTATTCACAAAAGCATTAATGAGAACATAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTTTATTGTTTCTTTATTCACAAAAGCATTAATGAGAACATAATA  250

seq1  GATATCCAGTTATAGAGGAGAGAATGGTGCTAATCTTGCATATGTACACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCCAGTTATAGAGGAGAGAATGGTGCTAATCTTGCATATGTACACC  300

seq1  ATTGAATTTTAATTACCTGTAATGGAAAAAGAAAAAATTCAAATTTACCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATTTTAATTACCTGTAATGGAAAAAGAAAAAATTCAAATTTACCG  350

seq1  AATGTTAATGGAACTAAAGTATACAGTGTCCCATACTCAAAACGATAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAATGGAACTAAAGTATACAGTGTCCCATACTCAAAACGATAACA  400

seq1  ACACCAAGTTCTCTTTATGTGCACATTCCACATTAAACTTTTTATATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAAGTTCTCTTTATGTGCACATTCCACATTAAACTTTTTATATGTA  450

seq1  TATAAATTAATTGATATAATTATTTATAAAACTAAAATTGTAGACAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTAATTGATATAATTATTTATAAAACTAAAATTGTAGACAGGAA  500

seq1  ATGAAGGTAGAAATAGAGAGATGTCAGAGAAAAAGTTGGAGATTTAAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGTAGAAATAGAGAGATGTCAGAGAAAAAGTTGGAGATTTAAAGC  550

seq1  AGGAAATAACATAAAAAAAGAATGAAAATCAAAATAAATAACAAATAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATAACATAAAAAAAGAATGAAAATCAAAATAAATAACAAATAAGT  600

seq1  ATGGCAGACTAGGAGAGCAGAGGAGGAGAAGAGGAAAGGAGATGAGGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGACTAGGAGAGCAGAGGAGGAGAAGAGGAAAGGAGATGAGGTCA  650

seq1  ACTGCTCAGCCACTAAAATCAATGACTTCATGTAATTCCCAGGCAAATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCAGCCACTAAAATCAATGACTTCATGTAATTCCCAGGCAAATGG  700

seq1  ATGGAAGTAGAAAATATCATAAGTGAGGTAACACAGTCAAAAAAGAACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGTAGAAAATATCATAAGTGAGGTAACACAGTCAAAAAAGAACAC  750

seq1  ACATTGTTTGTATTCACTATTAAGTGGATATTAGGACAATAGCTCAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTTTGTATTCACTATTAAGTGGATATTAGGACAATAGCTCAGAAT  800

seq1  ATTTATCATTAAATTTACAGACCATATGAAGGTCAAAAAGAAGGGAGAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCATTAAATTTACAGACCATATGAAGGTCAAAAAGAAGGGAGAGC  850

seq1  AATGTATGGATGCCTCAGTCCTACTTAGTAAAGAGAACAAAATCA-CCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AATGTATGGATGCCTCAGTCCTACTTAGTAAAGAGAACAAAATCACCCAC  900

seq1  AGGAGGTAGAGAATGTGCAGGACTTGGGAGGAAGTTGGGACAGAGAAAGG  949
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGGAGGTAGAGAATGTGCA-GACTTGGGAGGAAGTTGGGACAGAGAAAGG  949

seq1  AG-AAAAAAGAGAAGGAATGATCATGTGTGGGTGGAAATGGGGGAGAT  996
      || ||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGAAAAAAAGAGAAGG-ATGATCATGTGTGGGTGGAAATGGGGGAGAT  996