BAC Information

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BAC

Clone NameB6Ng01-008G10
Chromosome10 (Build37)
Map Location 101,985,707 - 102,089,221
singlet/doubletdoublet
Overlap genePamci
Upstream geneMgat4c, LOC667652, Nts
Downstream geneLOC382413, Cart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008G10.bB6Ng01-008G10.g
ACCDH844670DH844671
length680812
definitionDH844670|Mus musculus domesticus DNA, BAC clone: B6Ng01-008G10, 5' end.DH844671|Mus musculus domesticus DNA, BAC clone: B6Ng01-008G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,985,707 - 101,986,404)(102,088,568 - 102,089,221)
sequence
gaattcattctttctttctttctttctttctttctttctttctttctttc
tttctttctttctttgctaggaaggtgtatttggttctatcataggtctc
tctggcttatctggcttctggtttctggccctccaggcaatgtcaggggt
gggccttctctattgcatgggactcaagttgggacagtcattggttggcc
actccaacaatttctctgttacctttactctagcacatactgctggcagg
acaaattgtaggttgaaggttttgtggctgggttagtgtctcaatgcctc
cactacaagtcttgccttgtaatagagatggccacttcaggctccatatc
ccctatactaggcctcttagctaaggttaccataacatccctcagagatt
ccattgcagtttgtttctacctgaccccttaattgacctcccacccaatt
ccaattgtttcccccagtccactctttctctttccattcacctctcaact
gattcctcctgtttcctgtccccacccactccccagtccaccacgaccac
ttctaatagacaaaatcaaaggacgtttcttctggggaactactaaaaat
attgcataagatttagcaacatgaccatttagtattttttggttctgttt
taaagattgatgaaaccccagttttacata
gaattcagtgcagtttagttgaacagagttgagttccattgaattcgaac
aggtccattcagttcctataatcagtgcagttcaactcatggaattcagt
ggcagagcaattcagtgggaaactgagagaaggcagtgtgaattagtctg
cttggacaggagttttgagccagtttggaaagaactcgaaaaggtgagct
tattcagtagacaaccctgctacacaaaaataaaaattagatttatatct
ggcagtaaatctcagaggctaaaacatttttggcctagcttagcagattg
aggctgggagctgaagcctattgtaagatgatgagaagtttccagggtta
gccgaggcctaggggtagttagtacagagaaagaaatgctcacccagttt
tgctacagctctcctttcatcccttcttctgaggaaataaaaatgacatt
tatgtttacagtttcctaactgaattttgtgttagagtgaatagaaagct
gtttcactgtgcatcaggttaattctcatgtatacaaatggatttctatg
gtgttcatcacaatggaaaatatacatactaacttttgtttatttatact
tcaggtgttgctcacacaataattactctctgccaaagaatcgtgagtta
agcatgccgaggtcagagaaagtggcttttggaattttatgcaattcagt
ttgtggttacttcatttactttacatctattttgccagcaatttgctctt
tctttgtagcctctgaaaagccttagatgaaatctccatcacaaacttct
gactcccttaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_101985707_101986404
seq2: B6Ng01-008G10.b_85_721

seq1  TTCTTTCTTTCTTTCTTTCTTTGCTAGGAAGGTGTATTTGGTTCTATCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTGCTAGGAAGGTGTATTTGGTTCTATCAT  50

seq1  AGGTCTCTCTGGCTTATCTGGCTTCTGGTTTCTGGCCCTCCAGGCAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCTCTGGCTTATCTGGCTTCTGGTTTCTGGCCCTCCAGGCAATGT  100

seq1  CAGGGGTGGGCCTTCTCTATTGCATGGGACTCAAGTTGGGACAGTCATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTGGGCCTTCTCTATTGCATGGGACTCAAGTTGGGACAGTCATTG  150

seq1  GTTGGCCACTCCAACAATTTCTCTGTTACCTTTACTCTAGCACATACTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCCACTCCAACAATTTCTCTGTTACCTTTACTCTAGCACATACTGC  200

seq1  TGGCAGGACAAATTGTAGGTTGAAGGTTTTGTGGCTGGGTTAGTGTCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGACAAATTGTAGGTTGAAGGTTTTGTGGCTGGGTTAGTGTCTCA  250

seq1  ATGCCTCCACTACAAGTCTTGCCTTGTAATAGAGATGGCCACTTCAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCCACTACAAGTCTTGCCTTGTAATAGAGATGGCCACTTCAGGCT  300

seq1  CCATATCCCCTATACTAGGCCTCTTAGCTAAGGTTACCATAACATCCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATCCCCTATACTAGGCCTCTTAGCTAAGGTTACCATAACATCCCTC  350

seq1  AGAGATTCCATTGCAGTTTGTTTCTACCTGACCCCTTAATTGACCTCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTCCATTGCAGTTTGTTTCTACCTGACCCCTTAATTGACCTCCCA  400

seq1  CCCAATTCCAATTGTTTCCCCCAGTCCACTCTTTCTCTTTCCATTCACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATTCCAATTGTTTCCCCCAGTCCACTCTTTCTCTTTCCATTCACCT  450

seq1  CTCAACTGATTCCTCCTG-TTCCTGTCCCCACCCACTCCCCAGTCCACCA  499
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTCAACTGATTCCTCCTGTTTCCTGTCCCCACCCACTCCCCAGTCCACCA  500

seq1  CGACCACTTCTAATAGACAAAATCAAAGGACGTTTCTTCT-GGGAACTAC  548
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CGACCACTTCTAATAGACAAAATCAAAGGACGTTTCTTCTGGGGAACTAC  550

seq1  TAAAAATA-TGCATAAGATTTAGCAACATGACCATTTTAGTA-TTTTTGG  596
      |||||||| ||||||||||||||||||||||||| ||||||| |||||||
seq2  TAAAAATATTGCATAAGATTTAGCAACATGACCA-TTTAGTATTTTTTGG  599

seq1  TTCTG-TTTAAAGATTGATGAAACCCCAG-TTTACATAATTAAGTAAATG  644
      ||||| ||||||||||||||||||||||| ||||||||            
seq2  TTCTGTTTTAAAGATTGATGAAACCCCAGTTTTACATA------------  637

seq1  AAGACATATAATACAATGCTTTATATCGTCTTTCTTTACTGCACTATTTA  694
                                                        
seq2  --------------------------------------------------  637

seq1  CATA  698
          
seq2  ----  637

seq1: chr10_102088568_102089221
seq2: B6Ng01-008G10.g_222_880 (reverse)

seq1  TCTAA-GGAGTCAGAAGTTTGTGATTGGAGATTTCATCTAA-GCTTTTCA  48
      ||||| |||||||||||||||||| |||||||||||||||| ||||||||
seq2  TCTAAGGGAGTCAGAAGTTTGTGA-TGGAGATTTCATCTAAGGCTTTTCA  49

seq1  GAGGCTACAAAGAAAGAGCAAA-TGCTGGC-AAATAGATGTAAAGTAAAT  96
      |||||||||||||||||||||| ||||||| |||||||||||||||||||
seq2  GAGGCTACAAAGAAAGAGCAAATTGCTGGCAAAATAGATGTAAAGTAAAT  99

seq1  GAAGTAACCACAAACTGAATTGCATAAAATTCC-AAAGCCAC-TTCTCTG  144
      ||||||||||||||||||||||||||||||||| |||||||| |||||||
seq2  GAAGTAACCACAAACTGAATTGCATAAAATTCCAAAAGCCACTTTCTCTG  149

seq1  ACCTCGGCATGCTTAACTCACGATTCTTTGGCAGAGAGTAATTATTGTGT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCGGCATGCTTAACTCACGATTCTTTGGCAGAGAGTAATTATTGTGT  199

seq1  GAGCAACACCTGAAGTATAAATAAACAAAAGTTAGTATGTATATTTTCCA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAACACCTGAAGTATAAATAAACAAAAGTTAGTATGTATATTTTCCA  249

seq1  TTGTGATGAACACCATAGAAATCCATTTGTATACATGAGAATTAACCTGA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATGAACACCATAGAAATCCATTTGTATACATGAGAATTAACCTGA  299

seq1  TGCACAGTGAAACAGCTTTCTATTCACTCTAACACAAAATTCAGTTAGGA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGTGAAACAGCTTTCTATTCACTCTAACACAAAATTCAGTTAGGA  349

seq1  AACTGTAAACATAAATGTCATTTTTATTTCCTCAGAAGAAGGGATGAAAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAAACATAAATGTCATTTTTATTTCCTCAGAAGAAGGGATGAAAG  399

seq1  GAGAGCTGTAGCAAAACTGGGTGAGCATTTCTTTCTCTGTACTAACTACC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTGTAGCAAAACTGGGTGAGCATTTCTTTCTCTGTACTAACTACC  449

seq1  CCTAGGCCTCGGCTAACCCTGGAAACTTCTCATCATCTTACAATAGGCTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGCCTCGGCTAACCCTGGAAACTTCTCATCATCTTACAATAGGCTT  499

seq1  CAGCTCCCAGCCTCAATCTGCTAAGCTAGGCCAAAAATGTTTTAGCCTCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCCAGCCTCAATCTGCTAAGCTAGGCCAAAAATGTTTTAGCCTCT  549

seq1  GAGATTTACTGCCAGATATAAATCTAATTTTTATTTTTGTGTAGCAGGGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTACTGCCAGATATAAATCTAATTTTTATTTTTGTGTAGCAGGGT  599

seq1  TGTCTACTGAATAAGCTCACCTTTTCGAGTTCTTTCCAAACTGGCTCAAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTACTGAATAAGCTCACCTTTTCGAGTTCTTTCCAAACTGGCTCAAA  649

seq1  ACTCCTGTCC  654
      ||||||||||
seq2  ACTCCTGTCC  659