BAC Information

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BAC

Clone NameB6Ng01-008J11
Chromosome10 (Build37)
Map Location 118,808,641 - 118,939,446
singlet/doubletdoublet
Overlap geneGrip1
Upstream geneLOC668216, Ifng, LOC100043478, LOC100042850, Dyrk2, LOC668223, LOC100042861, LOC674417, Cand1
Downstream geneHelb, Irak3, Tmbim4, 1190005P17Rik, Hmga2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008J11.bB6Ng01-008J11.g
ACCDH844797DH844798
length587308
definitionDH844797|Mus musculus domesticus DNA, BAC clone: B6Ng01-008J11, 5' end.DH844798|Mus musculus domesticus DNA, BAC clone: B6Ng01-008J11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,938,855 - 118,939,446)(118,808,641 - 118,808,949)
sequence
tttctaagggtctgatggaatcatgtggaaatgtgggtctttagaccatc
tgtttggagggacattcagggaagactctcttatttcatttggctgtttg
gtgtttcatttggtggtggagaatggtgctttgattttaggtttttattt
tttgttttttgttgttgttgttttcatttgtttgtttggttggttaattg
attgttttgagagggagcatagtccaggctgtcctgacaaagtgcatccc
tcagttgctacctctggaatgctaggatcaaagctatccaggactatgct
gagtttatgactgtgagaaactgaacctgtggcttcatgcatactgactg
aataagcacagagatatgtccccagaaaaataatcatttaatatgttttt
catttcaatcacgctgaataaatataatgactgtggaaaaagaaataatt
tatgactaagagaattgtttttacctttcatgggggaagaaaagattatt
tttcaatctgtatttcagagaagataaataggcagtgaaatatacatcag
gtaatattataaagtattaaatgacctaattttgggc
tgggatggccaggtctacacagagaaacactgtctcgagaaacaaatgaa
cataaaaagataaacaaacaaataagaaataaaataaaatagataaactc
accagacatgatgtgcatgcctttaatcccagcacttaggaggcagagag
atggatctctgtgagttcaagaccagtctatactacattgtgagtttcaa
aatagccagggctctgtaggagaaacagaaagaaagaaagaaagaaagaa
agaaagaaagaaagaaagaaagaaagaaagaaagaaagagagagagagag
aggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_118938855_118939446
seq2: B6Ng01-008J11.b_44_636 (reverse)

seq1  GCCC-AAATTAGGTCATTTAATACTTTATAATATTACCTGATGTATATTT  49
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAAATTAGGTCATTTAATACTTTATAATATTACCTGATGTATATTT  50

seq1  CACTGCCTATTTTTCTTCTCTGAAATACAGATTGAAAAATAATCTTTTCT  99
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CACTGCCTATTTATCTTCTCTGAAATACAGATTGAAAAATAATCTTTTCT  100

seq1  TCCCCCATGAAAGGTAAAAACAATTCTCTTAGTCATAAATTATTTCTTTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCATGAAAGGTAAAAACAATTCTCTTAGTCATAAATTATTTCTTTT  150

seq1  TCCACAGTCATTATATTTATTCAGCGTGATTGAAATGAAAAACATATTAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGTCATTATATTTATTCAGCGTGATTGAAATGAAAAACATATTAA  200

seq1  ATGATTATTTTTCTGGGGACATATCTCTGTGCTTATTCAGTCAGTATGCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTATTTTTCTGGGGACATATCTCTGTGCTTATTCAGTCAGTATGCA  250

seq1  TGAAGCCACAGGTTCAGTTTCTCACAGTCATAAACTCAGCATAGTCCTGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCACAGGTTCAGTTTCTCACAGTCATAAACTCAGCATAGTCCTGG  300

seq1  ATAGCTTTGATCCTAGCATTCCAGAGGTAGCAACTGAGGGATGCACTTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTTTGATCCTAGCATTCCAGAGGTAGCAACTGAGGGATGCACTTTG  350

seq1  TCAGGACAGCCTGGACTATGCTCCCTCTCAAAACAATCAATTAACCAACC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACAGCCTGGACTATGCTCCCTCTCAAAACAATCAATTAACCAACC  400

seq1  AAACAAACAAATGAAAACAACAACAACAAAAAACAAAAAATAAAAACCTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAATGAAAACAACAACAACAAAAAACAAAAAATAAAAACCTA  450

seq1  AAATCAAAGCACCATTCTCCACCACCAAATGAAACACCAAACAGCCAAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAAGCACCATTCTCCACCACCAAATGAAACACCAAACAGCCAAAT  500

seq1  GAAATAAGAGAGTCTTCCCTGAATGTCCCTCCAAACAGATGGTCTAAAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAGAGAGTCTTCCCTGAATGTCCCTCCAAACAGATGGTCTAAAGA  550

seq1  CCCACATTTCCACATGATTCCATCAGACCCTTAGAAAGAATTC  592
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATTTCCACATGATTCCATCAGACCCTTAGAAAGAATTC  593

seq1: chr10_118808641_118808949
seq2: B6Ng01-008J11.g_73_380

seq1  TGGGATGGCCAGGTCTACACAGAGAAACACTGTCTCGAGAAACAAATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGGCCAGGTCTACACAGAGAAACACTGTCTCGAGAAACAAATGAA  50

seq1  CATAAAAAGATAAACAAACAAATAAGAAATAAAATAAAATAGATAAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAAGATAAACAAACAAATAAGAAATAAAATAAAATAGATAAACTC  100

seq1  ACCAGACATGATGTGCATGCCTTTAATCCCAGCACTTAGGAGGCAGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACATGATGTGCATGCCTTTAATCCCAGCACTTAGGAGGCAGAGAG  150

seq1  ATGGATCTCTGTGAGTTCAAGACCAGTCTATACTACATTGTGAGTTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATCTCTGTGAGTTCAAGACCAGTCTATACTACATTGTGAGTTTCAA  200

seq1  AATAGCCAGGGCTCTGTAGGAGAAACAGAAAGAAAGAAAGAAAGAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCCAGGGCTCTGTAGGAGAAACAGAAAGAAAGAAAGAAAGAAAGAA  250

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAG  300

seq1  AGAGGGGGG  309
      || ||||| 
seq2  AGGGGGGG-  308