BAC Information

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BAC

Clone NameB6Ng01-009B12
Chromosome10 (Build37)
Map Location 25,100,665 - 25,300,722
singlet/doubletdoublet
Overlap geneEpb4.1l2, 2010003K15Rik
Upstream geneLOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800
Downstream geneEG667513, LOC667519, LOC628697, C030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009B12.bB6Ng01-009B12.g
ACCDH845132DH845133
length1,0321,006
definitionDH845132|Mus musculus domesticus DNA, BAC clone: B6Ng01-009B12, 5' end.DH845133|Mus musculus domesticus DNA, BAC clone: B6Ng01-009B12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,100,665 - 25,101,696)(25,299,711 - 25,300,722)
sequence
gaattcaacatttaatcagagcactgctatttttataactgttaattggc
agaactctcgaacattatcttgtttttggtgtattatctgcagtcattcc
cacggtatcttctacagtgtgcttatttaactggtcttgcaaaggaacct
ttcctcacttacccatgcctttgctacttggtgtcttttattttgaaatt
ctcatttcattatgttttcataatggcgacttgttaaaaagacatgatgc
cacctcatgtcttctaagacctttcctttctctgactgggttttactgtt
tctgtggtgtatttagctcatctttctgtatcccttatttctgtcaaagt
aaaagtctgtctgaagaattcaaaccagagtaaacattttagtagagtgt
ttaacagccagacccattgcatcatcgcaggaaccatacaagtcagtagt
aatgaaggtgatgatttttcgattgtgaaatcatgatttccccttttata
tcatctaggaggagtgaaattttggcaatacatatacgtctagttcttca
tccaacttctacctaatatagtatccattggtggtttttaccagttatct
tcctggaattagcaaaagttataaaaaggatttttaaagaattggagtca
aaatatacaaactttttatcttgatctttttacagcatatagttcagtat
tacaattttttttgtgatgtgccgatcttaactgcactgaaactgtatat
ttctaaaatggtatttgatgctttaaaaaaaaagatttatttttatgtgt
gagtgttttgactgtgtgtgtatagtgcacccaccatgtgtatgtatcct
gggaagccaggagctgttgggtcccctggaacttgggtgacaggagttgt
gaactcctattttggtgctgggaactgaaccccagtctaaacagagcagc
aagtgctggttcagctgaggcaacttttcagcacctaagtaaacagctct
aactcttctttgctaagtggcttttcctttat
gaattcttgtacccttcagtactcctggaattagacagcaagtagtgcca
gactggaaacctatttccctcaagtaaaagattttgtttaaatttgtttt
tccttttatctcttcagatacatgcatatgtatatgtacgtgtatgtgta
cgtgtacatgtacgtgaacgtgaatgtggtgaatatgaatatataagatc
gtattctgtttgggcttgtcacttggactacacttaagctcctaagtatg
aatcccagatacagtccccaaacatctttctaattagctcttatacttaa
gtctgggtttaataacccttcttacactcctacttcagggttttttgaag
tttcaaggacatttggaataacaagtaaatccaaagatgagccacttgct
caggatattcctctgacttgtcctctactctgctgttgaaataattaatc
cacaattgaacaagagcatctgaggctgtgtaaagagctgtccttaaact
aattccagtgatgccttcagaactgagaaaacaatatgtttttgtttttt
tttttttactcatttgaaatatgatgccacagagtcagccacaaatgatg
gtaattccctcttaaggagcattaaagccttatggaaatttccagaacta
gacttgaatcgaggccagatactttaaaggagcaaaatctaatatgacaa
ggaatagaaatggcttcagaaaggcattgagtaaaaacagacatttggga
gaaggaaaccatcttgagagaagtaggaaaactcagaataaaaattagaa
tgtgacctgtgctgtcatctgctcagaaaattcgggggaatgaccagtca
ctgcacactcggcagacctggccttaatgaaaggcaaaatagtggggttc
ttgtttagactgttcagtgtagacagcttttcatcacctgtcaatggtgt
ttatacgggtgagggatcagttgaggcaaaatgagttcttgtagaaggag
agtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_25100665_25101696
seq2: B6Ng01-009B12.b_49_1080

seq1  GAATTCAACATTTAATCAGAGCACTGCTATTTTTATAACTGTTAATTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATTTAATCAGAGCACTGCTATTTTTATAACTGTTAATTGGC  50

seq1  AGAACTCTCGAACATTATCTTGTTTTTGGTGTATTATCTGCAGTCATTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCTCGAACATTATCTTGTTTTTGGTGTATTATCTGCAGTCATTCC  100

seq1  CACGGTATCTTCTACAGTGTGCTTATTTAACTGGTCTTGCAAAGGAACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTATCTTCTACAGTGTGCTTATTTAACTGGTCTTGCAAAGGAACCT  150

seq1  TTCCTCACTTACCCATGCCTTTGCTACTTGGTGTCTTTTATTTTGAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCACTTACCCATGCCTTTGCTACTTGGTGTCTTTTATTTTGAAATT  200

seq1  CTCATTTCATTATGTTTTCATAATGGCGACTTGTTAAAAAGACATGATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTCATTATGTTTTCATAATGGCGACTTGTTAAAAAGACATGATGC  250

seq1  CACCTCATGTCTTCTAAGACCTTTCCTTTCTCTGACTGGGTTTTACTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCATGTCTTCTAAGACCTTTCCTTTCTCTGACTGGGTTTTACTGTT  300

seq1  TCTGTGGTGTATTTAGCTCATCTTTCTGTATCCCTTATTTCTGTCAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGTGTATTTAGCTCATCTTTCTGTATCCCTTATTTCTGTCAAAGT  350

seq1  AAAAGTCTGTCTGAAGAATTCAAACCAGAGTAAACATTTTAGTAGAGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCTGTCTGAAGAATTCAAACCAGAGTAAACATTTTAGTAGAGTGT  400

seq1  TTAACAGCCAGACCCATTGCATCATCGCAGGAACCATACAAGTCAGTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGCCAGACCCATTGCATCATCGCAGGAACCATACAAGTCAGTAGT  450

seq1  AATGAAGGTGATGATTTTTCGATTGTGAAATCATGATTTCCCCTTTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGGTGATGATTTTTCGATTGTGAAATCATGATTTCCCCTTTTATA  500

seq1  TCATCTAGGAGGAGTGAAATTTTGGCAATACATATACGTCTAGTTCTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTAGGAGGAGTGAAATTTTGGCAATACATATACGTCTAGTTCTTCA  550

seq1  TCCAACTTCTACCTAATATAGTATCCATTGGTGGTTTTTACCAGTTATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTTCTACCTAATATAGTATCCATTGGTGGTTTTTACCAGTTATCT  600

seq1  TCCTGGAATTAGCAAAAGTTATAAAAAGGATTTTTAAAGAATTGGAGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAATTAGCAAAAGTTATAAAAAGGATTTTTAAAGAATTGGAGTCA  650

seq1  AAATATACAAACTTTTTATCTTGATCTTTTTACAGCATATAGTTCAGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATACAAACTTTTTATCTTGATCTTTTTACAGCATATAGTTCAGTAT  700

seq1  TACAATTTTTTTTGTGATGTGCCGATCTTAACTGCACTGAAACTGTATA-  749
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TACAATTTTTTTTGTGATGTGCCGATCTTAACTGCACTGAAACTGTATAT  750

seq1  TTCTAAAATGGTATTTGATGCTTTAAAAAAAAAGATTTATTTTTATGTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAATGGTATTTGATGCTTTAAAAAAAAAGATTTATTTTTATGTGT  800

seq1  GAGTGTTTTGACTGTGTGTGTATAGTGCACCCACCATGTGTATGTATCCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTTTGACTGTGTGTGTATAGTGCACCCACCATGTGTATGTATCCT  850

seq1  GGGAAGCCAGGAGCTGTCGGGTCCCCTGGAACTTGGGTGACAGGAGTTGT  899
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGGAAGCCAGGAGCTGTTGGGTCCCCTGGAACTTGGGTGACAGGAGTTGT  900

seq1  GAACTCCTATTTTGGTGCTGGGAACTGAACCCCAGTCCTAAGCAAGAGCA  949
      |||||||||||||||||||||||||||||||||||| |||| | ||||||
seq2  GAACTCCTATTTTGGTGCTGGGAACTGAACCCCAGT-CTAAAC-AGAGCA  948

seq1  GCAAGTGCT-GTTCAGCTGAGCCAACTTTCCAGCCACCTTAGTTAAACAG  998
      ||||||||| ||||||||||| ||||||| ||| ||||| || |||||||
seq2  GCAAGTGCTGGTTCAGCTGAGGCAACTTTTCAG-CACCTAAG-TAAACAG  996

seq1  CTCTAACTC-TCTTTGCTAAGTGGC-TTTCCTTTAT  1032
      ||||||||| ||||||||||||||| ||||||||||
seq2  CTCTAACTCTTCTTTGCTAAGTGGCTTTTCCTTTAT  1032

seq1: chr10_25299711_25300722
seq2: B6Ng01-009B12.g_70_1075 (reverse)

seq1  AACAC-CTCCCTCTACAAGAACTCATTTTTGCCTCAACTGATTCCCTCAC  49
      ||||| |||| |||||||||||||| ||||||||||||||| ||||||||
seq2  AACACTCTCCTTCTACAAGAACTCA-TTTTGCCTCAACTGA-TCCCTCAC  48

seq1  CCCTTAATAAACACCCATTGACA-GTGATTGGAGAGCTGTCTACACTGAA  98
      || |  ||||||| ||||||||| |||| || | |||||||||||||| |
seq2  CCGT--ATAAACA-CCATTGACAGGTGA-TGAAAAGCTGTCTACACTG-A  93

seq1  ACAGTCTAAACAGGACCCCCACTATTTTGCCTTTCATTAAGGCCAGGTCT  148
      |||||||||||| || ||||||||||||||||||||||||||||||||||
seq2  ACAGTCTAAACAAGAACCCCACTATTTTGCCTTTCATTAAGGCCAGGTCT  143

seq1  GCCGAGTGTGCAGTGGCTGGTCATTCCCCCGAATTTTCTGAGCAGATGAC  198
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCCGAGTGTGCAGTGACTGGTCATTCCCCCGAATTTTCTGAGCAGATGAC  193

seq1  AGCACAGGTCACATTCTAATTTTTATTCTGAGTTTTCCTACTTCTCTCAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGGTCACATTCTAATTTTTATTCTGAGTTTTCCTACTTCTCTCAA  243

seq1  GATGGTTTTCCTTCTCCCAAATGTCTGTTTTTACTCAATGCCTTTCTGAA  298
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGG-TTTCCTTCTCCCAAATGTCTGTTTTTACTCAATGCCTTTCTGAA  292

seq1  GCCATTTCTATTCCTTGTCATATTAGATTTTGCTCCTTTAAAGTATCTGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTCTATTCCTTGTCATATTAGATTTTGCTCCTTTAAAGTATCTGG  342

seq1  CCTCGATTCAAGTCTAGTTCTGGAAATTTCCATAAGGCTTTAATGCTCCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGATTCAAGTCTAGTTCTGGAAATTTCCATAAGGCTTTAATGCTCCT  392

seq1  TAAGAGGGAATTACCATCATTTGTGGCTGACTCTGTGGCATCATATTTCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGGAATTACCATCATTTGTGGCTGACTCTGTGGCATCATATTTCA  442

seq1  AATGAGTAAAAAAAAAAAAACAAAAACATATTGTTTTCTCAGTTCTGAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTAAAAAAAAAAAAACAAAAACATATTGTTTTCTCAGTTCTGAAG  492

seq1  GCATCACTGGAATTAGTTTAAGGACAGCTCTTTACACAGCCTCAGATGCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCACTGGAATTAGTTTAAGGACAGCTCTTTACACAGCCTCAGATGCT  542

seq1  CTTGTTCAATTGTGGATTAATTATTTCAACAGCAGAGTAGAGGACAAGTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCAATTGTGGATTAATTATTTCAACAGCAGAGTAGAGGACAAGTC  592

seq1  AGAGGAATATCCTGAGCAAGTGGCTCATCTTTGGATTTACTTGTTATTCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAATATCCTGAGCAAGTGGCTCATCTTTGGATTTACTTGTTATTCC  642

seq1  AAATGTCCTTGAAACTTCAAAAAACCCTGAAGTAGGAGTGTAAGAAGGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCTTGAAACTTCAAAAAACCCTGAAGTAGGAGTGTAAGAAGGGT  692

seq1  TATTAAACCCAGACTTAAGTATAAGAGCTAATTAGAAAGATGTTTGGGGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAACCCAGACTTAAGTATAAGAGCTAATTAGAAAGATGTTTGGGGA  742

seq1  CTGTATCTGGGATTCATACTTAGGAGCTTAAGTGTAGTCCAAGTGACAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATCTGGGATTCATACTTAGGAGCTTAAGTGTAGTCCAAGTGACAAG  792

seq1  CCCAAACAGAATACGATCTTATATATTCATATTCACCACATTCACGTTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACAGAATACGATCTTATATATTCATATTCACCACATTCACGTTCA  842

seq1  CGTACATGTACACGTACACATACACGTACATATACATATGCATGTATCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACATGTACACGTACACATACACGTACATATACATATGCATGTATCTG  892

seq1  AAGAGATAAAAGGAAAAACAAATTTAAACAAAATCTTTTACTTGAGGGAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATAAAAGGAAAAACAAATTTAAACAAAATCTTTTACTTGAGGGAA  942

seq1  ATAGGTTTCCAGTCTGGCACTACTTGCTGTCTAATTCCAGGAGTACTGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTTTCCAGTCTGGCACTACTTGCTGTCTAATTCCAGGAGTACTGAA  992

seq1  GGGTACAGGAATTC  1012
      ||||||| ||||||
seq2  GGGTACAAGAATTC  1006