BAC Information

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BAC

Clone NameB6Ng01-010A02
Chromosome10 (Build37)
Map Location 67,883,548 - 68,040,881
singlet/doubletdoublet
Overlap gene1700040L02Rik
Upstream geneEgr2, Gm237, LOC100040081, LOC100039618, Zfp365, Plekhk1, Arid5b, LOC100040136
Downstream geneEG665342, Tmem26, A930033H14Rik, Rhobtb1, LOC100040182, Cdc2a, LOC100039696, EG382371, Ank3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010A02.bB6Ng01-010A02.g
ACCDH845797DH845798
length1,033312
definitionDH845797|Mus musculus domesticus DNA, BAC clone: B6Ng01-010A02, 5' end.DH845798|Mus musculus domesticus DNA, BAC clone: B6Ng01-010A02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,039,840 - 68,040,881)(67,883,548 - 67,883,859)
sequence
gaattccctcatagaccgagtgactcatgttatgaaaaacgctacctgac
ccccccccccttcctatgccaatcaagagagtggttctctcagcttagta
cctgccttcatatccacttcctctatgaatgaagtgtctactatgtatca
gggattagagagatttggaatagggttgatatttttatggacttacatta
ctctcaaatgtatagatagcataaatagtgacgagaaagtagaattttat
gtctgcatgtaggggcagtgtagacttttcggggatgtgtaatgatgcat
cccctgtaccagagagcaaaattaagttcacaagacttctcagctgaatt
tggtatttggaagcacgagggtgctttcagatccgctgaagttatctggt
tgaactatctgctttagtaattacaggtgggggtttttttccccctctga
ctttgccaatttcaatttgtaactccgaatttaagaaaaaaccaccctga
attaaagactggttctgaaaatcgttacatttgccaccccctcgtcggca
atgtaatgaattatcagtaatacgctgagggcgcagagctctgccaagat
ttacttcctgtttccactcgggttggcttggcattattttccagtgttcc
aaaattgcatgtcaggatttatttgaaaacataataatttggaaatggat
atcttgctaattagagcatctgtctccagctacatctttttttcttccca
gctcggtcctgatttacaataatcacctcaccttcgcagatacaggagag
tgtttaggacagccctgagccccattcggcctccagaataacataaagtc
agcgcaggttatgctaccgctcggctccctgtgattatcgccatcttttg
tctcggtcagtttgtttcctgccaaagcattgatttatatcgcccacttc
tgagcgaagttactgcaagatctcccgtccaggatgagcagttaggcttt
tcctaacaaagatcagactatcaatgtgttata
attttatggtttggggtgtccaccaggacatgagtcctgtattaaagggt
tacagagttaggaaggctgagaagcactgctctagagcataagctgtcct
ggatgcaagcagcaaacaagagcatatggttaactcttaccataggtttt
catctcagtccctattagaatatacctgctgttcaaattttaaggcacct
tgagacaatctttaatggcatgccttttttttgtggcaattggtttgtgt
gtgtgtgtttgtgtgtgtgtacacacgcatgtatggatatgtgtatgtgt
gtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_68039840_68040881
seq2: B6Ng01-010A02.b_43_1075 (reverse)

seq1  TATAACACACATGATTAAGTCTGATCTTTGTTATGGAAAGCCTAATCGCT  50
      |||||||||  ||||  |||||||||||||||| | |||||||||  |||
seq2  TATAACACA-TTGAT--AGTCTGATCTTTGTTAGGAAAAGCCTAACTGCT  47

seq1  CATCCTGGACGGGAGAGCTTTGCAGTAACATCGCTCAGAAGCTGGGCGAT  100
      |||||||||||||||| | |||||||||| ||||||||||| ||||||||
seq2  CATCCTGGACGGGAGATC-TTGCAGTAACTTCGCTCAGAAG-TGGGCGAT  95

seq1  ATAAATCAATGCTTTGGCAAGAAACCAAACTGACCGGGAACAAAAGATGG  150
      ||||||||||||||||||| |||| ||||||||||| | |||||||||||
seq2  ATAAATCAATGCTTTGGCAGGAAA-CAAACTGACCGAG-ACAAAAGATGG  143

seq1  CGATAATTCACAGGGAGCCGAGCGGTAGCATAACCTGCGCTGACTTTATG  200
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CGATAA-TCACAGGGAGCCGAGCGGTAGCATAACCTGCGCTGACTTTATG  192

seq1  TTATTCTGGAGGCCGAATGGGGCTCAGGGCTGTTCCTAAACACTCTCCTG  250
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTATTCTGGAGGCCGAATGGGGCTCAGGGCTG-TCCTAAACACTCTCCTG  241

seq1  TATCTGCGAAGGTGAGGTGATTATTGTAAATCAGGACCGAGCTGGGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGCGAAGGTGAGGTGATTATTGTAAATCAGGACCGAGCTGGGAAGA  291

seq1  AAAAAAGATGTAGCTGGAGACAGATGCTCTAATTAGCAAGATATCCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGATGTAGCTGGAGACAGATGCTCTAATTAGCAAGATATCCATTT  341

seq1  CCAAATTATTATGTTTTCAAATAAATCCTGACATGCAATTTTGGAACACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTATTATGTTTTCAAATAAATCCTGACATGCAATTTTGGAACACT  391

seq1  GGAAAATAATGCCAAGCCAACCCGAGTGGAAACAGGAAGTAAATCTTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAATGCCAAGCCAACCCGAGTGGAAACAGGAAGTAAATCTTGGC  441

seq1  AGAGCTCTGCGCCCTCAGCGTATTACTGATAATTCATTACATTGCCGACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCTGCGCCCTCAGCGTATTACTGATAATTCATTACATTGCCGACG  491

seq1  AGGGGGTGGCAAATGTAACGATTTTCAGAACCAGTCTTTAATTCAGGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGTGGCAAATGTAACGATTTTCAGAACCAGTCTTTAATTCAGGGTG  541

seq1  GTTTTTTCTTAAATTCGGAGTTACAAATTGAAATTGGCAAAGTCAGAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTCTTAAATTCGGAGTTACAAATTGAAATTGGCAAAGTCAGAGGG  591

seq1  GGAAAAAAACCCCCACCTGTAATTACTAAAGCAGATAGTTCAACCAGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAACCCCCACCTGTAATTACTAAAGCAGATAGTTCAACCAGATA  641

seq1  ACTTCAGCGGATCTGAAAGCACCCTCGTGCTTCCAAATACCAAATTCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGCGGATCTGAAAGCACCCTCGTGCTTCCAAATACCAAATTCAGC  691

seq1  TGAGAAGTCTTGTGAACTTAATTTTGCTCTCTGGTACAGGGGATGCATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGTCTTGTGAACTTAATTTTGCTCTCTGGTACAGGGGATGCATCA  741

seq1  TTACACATCCCCGAAAAGTCTACACTGCCCCTACATGCAGACATAAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACATCCCCGAAAAGTCTACACTGCCCCTACATGCAGACATAAAATT  791

seq1  CTACTTTCTCGTCACTATTTATGCTATCTATACATTTGAGAGTAATGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTCTCGTCACTATTTATGCTATCTATACATTTGAGAGTAATGTAA  841

seq1  GTCCATAAAAATATCAACCCTATTCCAAATCTCTCTAATCCCTGATACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATAAAAATATCAACCCTATTCCAAATCTCTCTAATCCCTGATACAT  891

seq1  AGTAGACACTTCATTCATAGAGGAAGTGGATATGAAGGCAGGTACTAAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGACACTTCATTCATAGAGGAAGTGGATATGAAGGCAGGTACTAAGC  941

seq1  TGAGAGAACCACTCTCTTGATTGGCATAGGAAGGGGGGGGGGGTCAGGTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAACCACTCTCTTGATTGGCATAGGAAGGGGGGGGGGGTCAGGTA  991

seq1  GCGTTTTTCATAACATGAGTCACTCGGTCTATGAGGGAATTC  1042
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTTTTCATAACATGAGTCACTCGGTCTATGAGGGAATTC  1033

seq1: chr10_67883548_67883859
seq2: B6Ng01-010A02.g_72_383

seq1  ATTTTATGGTTTGGGGTGTCCACCAGGACATGAGTCCTGTATTAAAGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATGGTTTGGGGTGTCCACCAGGACATGAGTCCTGTATTAAAGGGT  50

seq1  TACAGAGTTAGGAAGGCTGAGAAGCACTGCTCTAGAGCATAAGCTGTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGTTAGGAAGGCTGAGAAGCACTGCTCTAGAGCATAAGCTGTCCT  100

seq1  GGATGCAAGCAGCAAACAAGAGCATATGGTTAACTCTTACCATAGGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCAAGCAGCAAACAAGAGCATATGGTTAACTCTTACCATAGGTTTT  150

seq1  CATCTCAGTCCCTATTAGAATATACCTGCTGTTCAAATTTTAAGGCACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAGTCCCTATTAGAATATACCTGCTGTTCAAATTTTAAGGCACCT  200

seq1  TGAGACAATCTTTAATGGCATGCCTTTTTTTTGTGGCAATTGGTTTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAATCTTTAATGGCATGCCTTTTTTTTGTGGCAATTGGTTTGTGT  250

seq1  GTGTGTGTTTGTGTGTGTGTACACACGCATGTATGGATATGTGTATGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTTTGTGTGTGTGTACACACGCATGTATGGATATGTGTATGTGT  300

seq1  GTGTGTGTGTGT  312
      ||||||||||||
seq2  GTGTGTGTGTGT  312