BAC Information

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BAC

Clone NameB6Ng01-010A15
Chromosome10 (Build37)
Map Location 29,093,060 - 29,094,156
singlet/doubletsinglet
Overlap genenone
Upstream genePtprk, E430004N04Rik, 4930519F09Rik, 2310057J18Rik, LOC432447, 6330407J23Rik, Echdc1, Rnf146
Downstream geneRspo3, EG630389, Rpl12, LOC623064, LOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik, LOC212815
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010A15.bB6Ng01-010A15.g
ACCDH845823DH845824
length1,0781,100
definitionDH845823|Mus musculus domesticus DNA, BAC clone: B6Ng01-010A15, 5' end.DH845824|Mus musculus domesticus DNA, BAC clone: B6Ng01-010A15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggccagctcggccaatttagccgtaaagccttgtctcagaac
agcagaaggccattgggaatatagctcaggagcccagtgcttgcctaaaa
tgcataagccccaggtccagccccattactacagagtaagcaaaggaaga
ggaaggagtaaggtcactttcactcctgagtgggagtctctcggagcaca
gcatggatgctgcctcttgctctagctttgtcatccagctcctgggattt
gctgtccttgctgtcgattgtcgtgacagttattttgctgggcacagacc
ttgctgtggtcacccctcgagaaccaaatcttggattttgagcaaagcaa
ctctttcatctggaggccaaatgacattttattgctttgggtttgttttt
tttttttctttcatttttaaagtagtttttagttttggagattataatta
tataattctcccctcccctttcctccgtgcaaaccccactcctttttatt
ctcttttaaattcataatcacctttactttaattattgtaacatgttttt
cgtacttgacatttgtatctcgtttcagaaggatggaagttgtctaggtg
tgaaccaaatactgacctctccctcaaaggtatcttctttgacatgagaa
gactgaacagtcagtcaaggatactgaaaacttaggttactcctggccta
gtacagagatcttagcagccaccaccaacagctccagcttcaaaataaca
ctctggtcttatcagattgactccaaccacatcctcatacagatgaaggc
cagcttcatctgtgtgccacctttaatgatttccaagaatggctcatccc
tgacagaatattttacttaaaaaaaaaataaatgatttctcaccaagcat
gcaatcgcaacactgtgggtacattggcacgtttcatataatctgtgttc
tcagtcacgcagtggacatctgttggtatgttgcaaaattcatttctctt
cttgaatgcgccagactcacattggaagctgccctttcttaggcatgcag
catgggattgttaaaagatgtttcattt
gaattctctgtttagctctgtacagcattttgtaatagggttatttgact
ctctggagtctaatttcttgagttctttgtatatattggatattagccct
ctatcaaatgtaggattggtaaagatcttttcccaatctgttggttgcct
tttgtcttaatgacagtgtcctttcccttacagaagctttgcaattttat
gaactcccatttgtcgttccttgatcttacagcacaagccattgctgttc
tgttcagaaattttttccctgtgcccatatcttcgaggctcttccccact
ttctcctctataaatttcagtgtatctggttttatgtggaggtccttgat
ccacttggacttgagctttgtccaagaagataagaatggatcaactcgaa
ttcttctacatcctaaccgccagttgtgccagcaccatttgttgaaaatg
ctgtctttttttccactggatggttttaactcctttgtcaaagatcaagt
gaccataggtgtgattgtccatctgatgaatggttagatgctcagcataa
gcaagaagcagacaataacctgtaaacctacaaagtagataaatgaatgt
aatgcctgtgacatagcccagatcctcaatcatggtttagtatacgtatt
ctcagaaaatgagaatattctaaccagctctatatagagatcggctcttc
agttgttttggaggagacaataagaattgctctatacatttgcccttgga
aagtaataagttcaacatctgaactggccttttcaaaactgccatcagat
ttagacttaatggttcataatctaatttaagattcaaggcttcggaaatg
acaccttgattgcattgacttagttctgctcgttttctttcatggttgaa
gagcaccttcttttttagtcacaaatttgatacagaaaaatgtatttatt
gtaaatagttctaagctttatctaaataatggtaaagctgccgaccccat
gctctctattcctgggttcattcccaccataataattataagctatatta
ctagtcagacccgacttgatcttcgtgggcgaggtaaaaataaatcacag

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_29093060_29094156
seq2: B6Ng01-010A15.b_36_1113

seq1  GAATTCAAGGCCAGCTCGGCCAATTTAGCCGTAAAGCCTTGTCTCAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCAGCTCGGCCAATTTAGCCGTAAAGCCTTGTCTCAGAAC  50

seq1  AGCAGAAGGCCATTGGGAATATAGCTCAGGAGCCCAGTGCTTGCCTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAGGCCATTGGGAATATAGCTCAGGAGCCCAGTGCTTGCCTAAAA  100

seq1  TGCATAAGCCCCAGGTCCAGCCCCATTACTACAGAGTAAGCAAAGGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAAGCCCCAGGTCCAGCCCCATTACTACAGAGTAAGCAAAGGAAGA  150

seq1  GGAAGGAGTAAGGTCACTTTCACTCCTGAGTGGGAGTCTCTCGGAGCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGTAAGGTCACTTTCACTCCTGAGTGGGAGTCTCTCGGAGCACA  200

seq1  GCATGGATGCTGCCTCTTGCTCTAGCTTTGTCATCCAGCTCCTGGGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGATGCTGCCTCTTGCTCTAGCTTTGTCATCCAGCTCCTGGGATTT  250

seq1  GCTGTCCTTGCTGTCGATTGTCGTGACAGTTATTTTGCTGGGCACAGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCTTGCTGTCGATTGTCGTGACAGTTATTTTGCTGGGCACAGACC  300

seq1  TTGCTGTGGTCACCCCTCGAGAACCAAATCTTGGATTTTGAGCAAAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTGGTCACCCCTCGAGAACCAAATCTTGGATTTTGAGCAAAGCAA  350

seq1  CTCTTTCATCTGGAGGCCAAATGACATTTTATTGCTTTGGGTTTGTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCATCTGGAGGCCAAATGACATTTTATTGCTTTGGGTTTGTTTTT  400

seq1  TTTTTTTCTTTCATTTTTAAAGTAGTTTTTAGTTTTGGAGATTATAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTTTCATTTTTAAAGTAGTTTTTAGTTTTGGAGATTATAATTA  450

seq1  TATAATTCTCCCCTCCCCTTTCCTCCGTGCAAACCCCACTCCTTTTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTCTCCCCTCCCCTTTCCTCCGTGCAAACCCCACTCCTTTTTATT  500

seq1  CTCTTTTAAATTCATAATCACCTTTACTTTAATTATTGTAACATGTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTAAATTCATAATCACCTTTACTTTAATTATTGTAACATGTTTTT  550

seq1  CGTACTTGACATTTGTATCTCGTTTCAGAAGGATGGAAGTTGTCTAGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACTTGACATTTGTATCTCGTTTCAGAAGGATGGAAGTTGTCTAGGTG  600

seq1  TGAACCAAATACTGACCTCTCCCTCAAAGGTATCTTCTTTGACATGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCAAATACTGACCTCTCCCTCAAAGGTATCTTCTTTGACATGAGAA  650

seq1  GACTGAACAGTCAGTCAAGGATACTGAAAACTTAGGTTACTCCTGGCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAACAGTCAGTCAAGGATACTGAAAACTTAGGTTACTCCTGGCCTA  700

seq1  GTACAGAGATCTTAGCAGCCACCACCAACAGCTCCAGCTTCAAAATAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGAGATCTTAGCAGCCACCACCAACAGCTCCAGCTTCAAAATAACA  750

seq1  CTCTGGTCTTATCAGATTGACTCCAACCACATCCTCATACAGATGAAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTCTTATCAGATTGACTCCAACCACATCCTCATACAGATGAAGGC  800

seq1  CAGCTTCATCTGTGTGCCACCTTTAATGATTTCCAAGAATGGCTCAT-CC  849
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAGCTTCATCTGTGTGCCACCTTTAATGATTTCCAAGAATGGCTCATCCC  850

seq1  TGACAGAATATTTTACTTAAAAAAAAAATAAATGATCTCTCACCAAGCAT  899
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGACAGAATATTTTACTTAAAAAAAAAATAAATGATTTCTCACCAAGCAT  900

seq1  GCAATCGCAACACTGTGGGTACATTGGCACGTTTCATATAATCTGTGTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCGCAACACTGTGGGTACATTGGCACGTTTCATATAATCTGTGTTC  950

seq1  TTCAGTCACGCAGTGGACATCTGTTGGTTATGTTTGCCAAAAATTCATTT  999
       |||||||||||||||||||||||||| |||| ||||  |||||||||||
seq2  -TCAGTCACGCAGTGGACATCTGTTGG-TATG-TTGC--AAAATTCATTT  995

seq1  CCCCTTCCTTTGAAATGGCGCCCCAGACTCACATTGGGAAGGCTGCCCCT  1049
       | ||||  |||||     || |||||||||||||||  | |||| ||||
seq2  -CTCTTC--TTGAA----TGCGCCAGACTCACATTGG--AAGCTG-CCCT  1035

seq1  TCCTTAGGGCATGCAAGCATGGGATTGTTAAACAGGATGTTTTCATTT  1097
      | |||| ||||||| ||||||||||||||||  | |||| ||||||||
seq2  TTCTTA-GGCATGC-AGCATGGGATTGTTAA--AAGATG-TTTCATTT  1078