BAC Information

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BAC

Clone NameB6Ng01-010C14
Chromosome10 (Build37)
Map Location 127,394,040 - 127,394,945
singlet/doubletsinglet
Overlap genenone
Upstream geneCtdsp2, Avil, Tsfm, Mettl1, Cyp27b1, March9, Cdk4, Tspan31, Centg1, Os9, LOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro
Downstream geneLOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010C14.bB6Ng01-010C14.g
ACCDH845911DH845912
length1,276906
definitionDH845911|Mus musculus domesticus DNA, BAC clone: B6Ng01-010C14, 5' end.DH845912|Mus musculus domesticus DNA, BAC clone: B6Ng01-010C14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagttttttgtttgataccaaattccttacaaaatgaaataaaa
ttgctgccagtatagaatggcccattatcttcttaatgactttaggcaat
cccatagcattaaatgcttgtaaacaatgatcagttacatttctagaggc
ctctcctgtatgtagagaagcaaaaaaaaatcctgaacaagtgacaatac
aaacgtgtatatattttaattttccaaattctgcacaatgagttacatcc
atttgccaaatatgattgggtatagggcctcgtgaattaacccctaaatg
tggaactggagataatgtaatacatttagggcattgttttacaatcattc
ttgcctgctccttagtgatcttatgtcgaaaccttaaggtgtgtgtcagg
atactctggtggagtcagcttgtgaggcagaaatgccaaaaagctgctca
tgagaaatgaatttctaggactctcctcctagatattctggcgaaagcca
actctccagcttggatcggtttgtcaggcgaaaagcctggaagctgtttc
atgaagataagagtccagggaaattttcctcccagagttatggcatctct
ttccctaacccattatattcaaatttccaccacattaatctagtgtatag
attcacgtgcactctatatagtattaccttatagtaaatgccttttaaga
ttgtattctaacatagctaaagcctttttccagtgttcttagattccaga
tagcagcaaggagcttaacctattcagtaactaattaagctgcatcataa
aacaatataaacatctgctatttactcagctgtctgtagatagagactaa
aagtctcactgagatagaatcttttactacaggctacttccatgtcaagt
atagttgatatactaccctgataaggggaaactctccagacagatagttt
tattagactaagatttagagctctgtgatagcacattactctaagctgtc
aagagttaacaacccctgattaagtgtgaaattcttgcctgcataagcat
tagctgatctaggcaggcttttatccctatgtaaatttaatagtcctgaa
ttcttttgcgactgtggaattcatgaatctgtctttttggaatgaatcct
cgtaatcgttgataaagtctgaagctaacaggaacaatacatcagtcaaa
cctggggtaccgtctgcaatacgcactctttggcacctcactcgtgtcaa
tatcggtctcaacgagaccctacagc
gaattctctttgtagaccaggcttgccttgaactgacagagatcctcctg
tctctgctaatccccagtgctaggattaaaggtgtgtgccaccaggccag
gcttgtataccctgccttcttaaaaagtgtcttctggggatcaaactttc
aaagtgagcactttactgaatgtgacaacttccgagctctctttctggag
tcttgacaattaaatctagtagatgcaagatgaagatagtaagtagacga
gaaggcgctcacaatctggatttggtaagtctgaaagagtacctattcaa
agtgatcaaggcagatgggcatagtgggactgtggtggagtcagagcaca
caagggagcaagagatgacattgtcaggtgtgaaggcgggtaagcgtgaa
accaagcttgcttcttaggtaaataccttttcataaatacctacacaggg
ttcccataagaacatgtcaactcttccaagctcattcttccggtgatcca
catccgagttcctccctaactatgcctacttcagaggctgactctgtaac
cgtgtttagcaatcttctggagcaaatgtctacacaaattgctaagacta
atgacaaactaataataataataattagtcccctgcctggatggcctctc
ctacctcggcgtgcacaaggccgagactatcccccttcatagtgactttg
ggtctcacaggctctaaacagagggaaacaagtcctcaatacctaggctg
tgcatgggcattgtcctttgagcaactcccatcttctggtgtcaaattcc
agacctctaacatctgtaccggtaaggagaaagtgaccttgatagtaaat
aaatatgcttttctctcaagaggtgcgtgaatgtgtgtgtgtgtgtgggg
gggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_127394040_127394945
seq2: B6Ng01-010C14.g_66_971 (reverse)

seq1  CCCCCCCCCCACACACACACACACATTCACGCACCTCTTGAGAGAAAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCACACACACACACACATTCACGCACCTCTTGAGAGAAAAGC  50

seq1  ATATTTATTTACTATCAAGGTCACTTTCTCCTTACCGGTACAGATGTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATTTACTATCAAGGTCACTTTCTCCTTACCGGTACAGATGTTAG  100

seq1  AGGTCTGGAATTTGACACCAGAAGATGGGAGTTGCTCAAAGGACAATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGGAATTTGACACCAGAAGATGGGAGTTGCTCAAAGGACAATGCC  150

seq1  CATGCACAGCCTAGGTATTGAGGACTTGTTTCCCTCTGTTTAGAGCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACAGCCTAGGTATTGAGGACTTGTTTCCCTCTGTTTAGAGCCTGT  200

seq1  GAGACCCAAAGTCACTATGAAGGGGGATAGTCTCGGCCTTGTGCACGCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCAAAGTCACTATGAAGGGGGATAGTCTCGGCCTTGTGCACGCCG  250

seq1  AGGTAGGAGAGGCCATCCAGGCAGGGGACTAATTATTATTATTATTAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGAGAGGCCATCCAGGCAGGGGACTAATTATTATTATTATTAGTT  300

seq1  TGTCATTAGTCTTAGCAATTTGTGTAGACATTTGCTCCAGAAGATTGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTAGTCTTAGCAATTTGTGTAGACATTTGCTCCAGAAGATTGCTA  350

seq1  AACACGGTTACAGAGTCAGCCTCTGAAGTAGGCATAGTTAGGGAGGAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACGGTTACAGAGTCAGCCTCTGAAGTAGGCATAGTTAGGGAGGAACT  400

seq1  CGGATGTGGATCACCGGAAGAATGAGCTTGGAAGAGTTGACATGTTCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATGTGGATCACCGGAAGAATGAGCTTGGAAGAGTTGACATGTTCTTA  450

seq1  TGGGAACCCTGTGTAGGTATTTATGAAAAGGTATTTACCTAAGAAGCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACCCTGTGTAGGTATTTATGAAAAGGTATTTACCTAAGAAGCAAG  500

seq1  CTTGGTTTCACGCTTACCCGCCTTCACACCTGACAATGTCATCTCTTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTTCACGCTTACCCGCCTTCACACCTGACAATGTCATCTCTTGCT  550

seq1  CCCTTGTGTGCTCTGACTCCACCACAGTCCCACTATGCCCATCTGCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTGTGCTCTGACTCCACCACAGTCCCACTATGCCCATCTGCCTTG  600

seq1  ATCACTTTGAATAGGTACTCTTTCAGACTTACCAAATCCAGATTGTGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTTGAATAGGTACTCTTTCAGACTTACCAAATCCAGATTGTGAGC  650

seq1  GCCTTCTCGTCTACTTACTATCTTCATCTTGCATCTACTAGATTTAATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTCGTCTACTTACTATCTTCATCTTGCATCTACTAGATTTAATTG  700

seq1  TCAAGACTCCAGAAAGAGAGCTCGGAAGTTGTCACATTCAGTAAAGTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACTCCAGAAAGAGAGCTCGGAAGTTGTCACATTCAGTAAAGTGCT  750

seq1  CACTTTGAAAGTTTGATCCCCAGAAGACACTTTTTAAGAAGGCAGGGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGAAAGTTTGATCCCCAGAAGACACTTTTTAAGAAGGCAGGGTAT  800

seq1  ACAAGCCTGGCCTGGTGGCACACACCTTTAATCCTAGCACTGGGGATTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCTGGCCTGGTGGCACACACCTTTAATCCTAGCACTGGGGATTAG  850

seq1  CAGAGACAGGAGGATCTCTGTCAGTTCAAGGCAAGCCTGGTCTACAAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACAGGAGGATCTCTGTCAGTTCAAGGCAAGCCTGGTCTACAAAGA  900

seq1  GAATTC  906
      ||||||
seq2  GAATTC  906