BAC Information

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BAC

Clone NameB6Ng01-010G13
Chromosome10 (Build37)
Map Location 127,974,496 - 128,171,421
singlet/doubletdoublet
Overlap geneZc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka
Upstream geneLrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2
Downstream geneLOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010G13.bB6Ng01-010G13.g
ACCDH846085DH846086
length998923
definitionDH846085|Mus musculus domesticus DNA, BAC clone: B6Ng01-010G13, 5' end.DH846086|Mus musculus domesticus DNA, BAC clone: B6Ng01-010G13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,974,496 - 127,975,501)(128,170,496 - 128,171,421)
sequence
gaattcctgatcctctggcttcagcctttcaagtgcaggaattacaggtg
tgaaccaccacactcaaccatggttttaaaagtaagtgtgcatgcggtgt
gtgcttgtccacgagtgtgcatgtgcatagctagaataacaggtgattgt
gagctgctgacttgggtgtgcagagaaccaaactcaggtcctttgagtgg
acagttgtgggaagccacatgtgccgttgcagagtggcactgactactgc
tggccaccatgcataagtttggacaaacaaccaatgtgtacatatgcagt
aaagttttttgcaaagacactccctggcccgggcatgataatgaggcttt
gagagtatgaccaatcagatgtgagacatgcaaatgaggtatgataatga
ggctctgtgaggtacagagagtagccaatcagatgaggaacatgcaaatg
aggcgtagtgcataaccaatctgggtgtgagacacgcctctcctaggcct
atataagcagcaccagttctgggcttggggtctcttcgcctctgcaatca
agctctcccaataaacgtgtgcagaaggatcctgttgcagcatagttctt
gctggtcgagtccaaggagcgcaagagacagtgttactaactcctctggg
ggagacacacattctaaagttccaaagacaaaccaaggtacaagacagtg
ttactaactcctctgggggagacacacattctaaagttccaaagacaaac
caaggtacaagtccaccaaaagttcaccggggaaccagtagactcttagg
cttacttacagagcagcgagtgagagttacaaacaggagcacagtgacct
taaagcagccaccctggaagtctgaacccaggagggatgatggctctcca
gatgcatagagaagtcccttcccctcagcctttcccacttttatcctcta
gcccctccccaagaacatgagtccaagcaataaggcagaattgcatgc
gaattcttgggggtttgtttttgtggtgtttaatattctttttgaggcag
ggcctcactatgactccctggctggcctggaactccctatgctgtggagc
agcatggccttgaactcatagagatctgccttccaagtgctgggattaca
gggccaccatgcctggtttggggatgagttctttggatctctcgcataaa
ctgacccagttgctcaaacacttcacagtcaccttcaagctatatgacat
ggacagaaatgggatcctggatagcacggtgagctgtgggacctgtgtgc
tgggcaagggagtctgtccatctgcctgtgttcgcatacctagacttttc
cagggtttccagaaacagagaaaaggttgggggtgtagcttaatggccca
gagcgtgcatagcatacagaaaaccttgggttcatccctaaaactaccct
ctccccagcattaaataaaaaaaaaaaaagcagaagacagtggtattgag
gagatacttagtcccctagaactaactatggaagcagttcccaagaactt
ggactctaaaatagagaagccaagagatgggaagcctataaatacttact
tgtcagaggtacctgagaacaagaggtgattctggaagtggaatccagga
gccctgatttctagaggacgtttgtatagtggccatagtaagtggctatc
tgtggcttttaccctcttttcttcaggaagtggaaaaaatcatccttcag
atgatgcgagtgcccgaatatctagactggggatgtgtctgagctgagac
cggtgaggcagcttgtccttttccttattccatccctactcccccacggt
cctgtatctgccttatccatctcccacggttcctggttcttctgctactg
acttgtggtggtctaggagatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_127974496_127975501
seq2: B6Ng01-010G13.b_44_1041

seq1  GAATTCCTGATCCTCTGGCTTCAGCCTTTCAAGTGCAGGAATTACAGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCCTCTGGCTTCAGCCTTTCAAGTGCAGGAATTACAGGTG  50

seq1  TGAACCACCACACTCAACCATGGTTTTAAAAGTAAGTGTGCATGCGGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCACCACACTCAACCATGGTTTTAAAAGTAAGTGTGCATGCGGTGT  100

seq1  GTGCTTGTCCACGAGTGTGCATGTGCATAGCTAGAATAACAGGTGATTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTGTCCACGAGTGTGCATGTGCATAGCTAGAATAACAGGTGATTGT  150

seq1  GAGCTGCTGACTTGGGTGTGCAGAGAACCAAACTCAGGTCCTTTGAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGCTGACTTGGGTGTGCAGAGAACCAAACTCAGGTCCTTTGAGTGG  200

seq1  ACAGTTGTGGGAAGCCACATGTGCCGTTGCAGAGTGGCACTGACTACTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGTGGGAAGCCACATGTGCCGTTGCAGAGTGGCACTGACTACTGC  250

seq1  TGGCCACCATGCATAAGTTTGGACAAACAACCAATGTGTACATATGCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACCATGCATAAGTTTGGACAAACAACCAATGTGTACATATGCAGT  300

seq1  AAAGTTTTTTGCAAAGACACTCCCTGGCCCGGGCATGATAATGAGGCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTTTTGCAAAGACACTCCCTGGCCCGGGCATGATAATGAGGCTTT  350

seq1  GAGAGTATGACCAATCAGATGTGAGACATGCAAATGAGGTATGATAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTATGACCAATCAGATGTGAGACATGCAAATGAGGTATGATAATGA  400

seq1  GGCTCTGTGAGGTACAGAGAGTAGCCAATCAGATGAGGAACATGCAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGTGAGGTACAGAGAGTAGCCAATCAGATGAGGAACATGCAAATG  450

seq1  AGGCGTAGTGCATAACCAATCTGGGTGTGAGACACGCCTCTCCTAGGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGTAGTGCATAACCAATCTGGGTGTGAGACACGCCTCTCCTAGGCCT  500

seq1  ATATAAGCAGCACCAGTTCTGGGCTTGGGGTCTCTTCGCCTCTGCAATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGCAGCACCAGTTCTGGGCTTGGGGTCTCTTCGCCTCTGCAATCA  550

seq1  AGCTCTCCCAATAAACGTGTGCAGAAGGATCCTGTTGCAGCATAGTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCCCAATAAACGTGTGCAGAAGGATCCTGTTGCAGCATAGTTCTT  600

seq1  GCTGGTCGAGTCCAAGGAGCGCAAGAGACAGTGTTACTAACTCCTCTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTCGAGTCCAAGGAGCGCAAGAGACAGTGTTACTAACTCCTCTGGG  650

seq1  GGAGACACACATTCTAAAGTTCCAAAGACAAACCAAGGTACAAGACAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACACACATTCTAAAGTTCCAAAGACAAACCAAGGTACAAGACAGTG  700

seq1  TTACTAACTCCTCTGGGGGAGACACACATTCTAAAGTTCCAAAGACAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAACTCCTCTGGGGGAGACACACATTCTAAAGTTCCAAAGACAAAC  750

seq1  CAAGGTACAAGTCCACCAAAAGTTCACCGGGGAACCAGTAGACTCTTAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTACAAGTCCACCAAAAGTTCACCGGGGAACCAGTAGACTCTTAGG  800

seq1  CTTACTTACAGAGCAGCGAGTGAGAGTTACAAACAGGAGCACAGGTGACC  850
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTTACTTACAGAGCAGCGAGTGAGAGTTACAAACAGGAGCACA-GTGACC  849

seq1  TTAAAGCAGCCACCCTGGAAGGTCTGAACCCAGGAGGGATGATGGCTTCT  900
      |||||||||||||||||||| ||||||||||||||||||||||||| |||
seq2  TTAAAGCAGCCACCCTGGAA-GTCTGAACCCAGGAGGGATGATGGC-TCT  897

seq1  CCAGATGCATAGAGAAGGTCCCTTCCCCTCAGCCTTTCCCACTTATATCC  950
      |||||||||||||||| ||||||||||||||||||||||||||| |||||
seq2  CCAGATGCATAGAGAA-GTCCCTTCCCCTCAGCCTTTCCCACTTTTATCC  946

seq1  TCTAGCCCCTCCCCCAAGAACCATGAGTCCAAGGCAATTAGGGCAGAATT  1000
      |||||||||| ||||||||| ||||||||||| |||| || |||||||||
seq2  TCTAGCCCCT-CCCCAAGAA-CATGAGTCCAA-GCAA-TAAGGCAGAATT  992

seq1  GCATGC  1006
      ||||||
seq2  GCATGC  998

seq1: chr10_128170496_128171421
seq2: B6Ng01-010G13.g_65_987 (reverse)

seq1  CCATCTCCTAGGACACCACACAGTCATGCTAGCAGAGGAACCAGGTACCC  50
      |||||||||||  ||||||| |||||   ||||||| |||||||| | ||
seq2  CCATCTCCTAGACCACCACA-AGTCA--GTAGCAGAAGAACCAGG-AACC  46

seq1  GTGGGAGATGGGATAAGGCAGATACAGGACCGTGGGGG-GTAGGGATGGA  99
      ||||||||| |||||||||||||||||||||||||||| |||||||||||
seq2  GTGGGAGAT-GGATAAGGCAGATACAGGACCGTGGGGGAGTAGGGATGGA  95

seq1  ATAAGGAAAAGGACAAGCTGCCTCACCGGTCTCAGCTCAGACACAT-CCC  148
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATAAGGAAAAGGACAAGCTGCCTCACCGGTCTCAGCTCAGACACATCCCC  145

seq1  AGTCTAGATATTCGGCCACTCGCATCATCTGAAGGATGATTTTTTCCACT  198
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGTCTAGATATTCGGGCACTCGCATCATCTGAAGGATGATTTTTTCCACT  195

seq1  TCCTGAAGAAAAGAGGGTAAAAGCCACAGATAGCCACTTACTATGGCCAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAGAAAAGAGGGTAAAAGCCACAGATAGCCACTTACTATGGCCAC  245

seq1  TATACAAACGTCCTCTAGAAATCAGGGCTCCTGGATTCCACTTCCAGAAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAAACGTCCTCTAGAAATCAGGGCTCCTGGATTCCACTTCCAGAAT  295

seq1  CACCTCTTGTTCTCAGGTACCTCTGACAAGTAAGTATTTATAGGCTTCCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTTGTTCTCAGGTACCTCTGACAAGTAAGTATTTATAGGCTTCCC  345

seq1  ATCTCTTGGCTTCTCTATTTTAGAGTCCAAGTTCTTGGGAACTGCTTCCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTGGCTTCTCTATTTTAGAGTCCAAGTTCTTGGGAACTGCTTCCA  395

seq1  TAGTTAGTTCTAGGGGACTAAGTATCTCCTCAATACCACTGTCTTCTGCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGTTCTAGGGGACTAAGTATCTCCTCAATACCACTGTCTTCTGCT  445

seq1  TTTTTTTTTTTTATTTAATGCTGGGGAGAGGGTAGTTTTAGGGATGAACC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTATTTAATGCTGGGGAGAGGGTAGTTTTAGGGATGAACC  495

seq1  CAAGGTTTTCTGTATGCTATGCACGCTCTGGGCCATTAAGCTACACCCCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTTTCTGTATGCTATGCACGCTCTGGGCCATTAAGCTACACCCCC  545

seq1  AACCTTTTCTCTGTTTCTGGAAACCCTGGAAAAGTCTAGGTATGCGAACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTTCTCTGTTTCTGGAAACCCTGGAAAAGTCTAGGTATGCGAACA  595

seq1  CAGGCAGATGGACAGACTCCCTTGCCCAGCACACAGGTCCCACAGCTCAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGATGGACAGACTCCCTTGCCCAGCACACAGGTCCCACAGCTCAC  645

seq1  CGTGCTATCCAGGATCCCATTTCTGTCCATGTCATATAGCTTGAAGGTGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCTATCCAGGATCCCATTTCTGTCCATGTCATATAGCTTGAAGGTGA  695

seq1  CTGTGAAGTGTTTGAGCAACTGGGTCAGTTTATGCGAGAGATCCAAAGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAGTGTTTGAGCAACTGGGTCAGTTTATGCGAGAGATCCAAAGAA  745

seq1  CTCATCCCCAAACCAGGCATGGTGGCCCTGTAATCCCAGCACTTGGAAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCCCAAACCAGGCATGGTGGCCCTGTAATCCCAGCACTTGGAAGG  795

seq1  CAGATCTCTATGAGTTCAAGGCCATGCTGCTCCACAGCATAGGGAGTTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTCTATGAGTTCAAGGCCATGCTGCTCCACAGCATAGGGAGTTCC  845

seq1  AGGCCAGCCAGGGAGTCATAGTGAGGCCCTGCCTCAAAAAGAATATTAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCCAGGGAGTCATAGTGAGGCCCTGCCTCAAAAAGAATATTAAA  895

seq1  CACCACAAAAACAAACCCCCAAGAATTC  926
      ||||||||||||||||||||||||||||
seq2  CACCACAAAAACAAACCCCCAAGAATTC  923