BAC Information

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BAC

Clone NameB6Ng01-010H10
Chromosome10 (Build37)
Map Location 96,755,046 - 96,898,193
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC667380, Btg1, LOC628256, 4930556N09Rik, EG667407
Downstream geneDcn, Lum, Kera, Epyc, 4921510H08Rik, EG667438
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010H10.bB6Ng01-010H10.g
ACCDH846126DH846127
length1,0711,034
definitionDH846126|Mus musculus domesticus DNA, BAC clone: B6Ng01-010H10, 5' end.DH846127|Mus musculus domesticus DNA, BAC clone: B6Ng01-010H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,897,106 - 96,898,193)(96,755,046 - 96,756,088)
sequence
gaattcaagtgatgggtttatgaatgaaatgaaactataatggaatgtat
cctgatcattcgtcaggggaaccaaagagacttgctgaataaataattca
atagttcatttctgatttctcattctagaggttgaaatgacgagacttgg
aaaactgtattttcccgtcctcatccaaattacagagggaaggactcgtg
acaagaggcaaagatatttctggagcatggcacatagacacatgtcttaa
aagctggatattctgccacaagggaaattggtgagcctaaagtaactgca
gatgagccctgttaccagtcggtcaaagcaattcttaacttttgaagatg
catattgtaatatctaacagtagttcatttctttcaatgatgacttacag
cttcacagtgggatggtctgttcaactgcagatggtttaactttatatct
aggaattcctgcatagaaaacatttagaggcgaaaggccagtatgactct
aaactgtgccatgctgtaacctgttttgagaatgcagcatctggactctg
ttgctctctctcatgaaaattcccacttccttttaaaccttgatacctct
aattgctctgactaggactttgagtactatattgaatatgtagggagaga
ctgagcataattttctaacaacaatgcctcctaactatgtattttggaca
attaaataatccccgaagcactctaccatttcttttaagttctgatcctg
ccaccatgattcaactttaacaattttcatgaccagattttgcgcattac
cttcagtgtcttcctagcaaagcctttgctttgttgctttaattttctga
tattgacttccttccagctctgacaatctctcccagatattttactatat
ccttgcatgagctttaagttctggtgaaattgttactatagctagatatc
cctgtattttgtatgattatcaatctgctacctaatattttactgactta
tgcagctggcccagtaggtgtagatgcatctacatagatcatttgatcat
tttctatgccactatgactgt
gaattcactgggccatttctcctagaagtaacatatagcccagggcttta
aaggaaaatgacttgaggtgatggcaggtccagggagagaactgggaagt
gggttctggaatagactcaggatcccactaaatggagcaaagtgatatac
taatgtccacctgagtgagaggcttagaacattcattaggcatttagctc
cagcaaaggaaagaatccagtggtctaatcttgtgttcaaagttttctac
ggttagcattagtaggtggaggccatgcttttgacaggacatgcactgcc
actgttccctgtgtaaataatcttcagtcagcatttagggtcatgaggat
aagtgttctataattatgctgtatttttctccaaatccaatcgtgattcc
tacagtttagccataggaaccagcatttacatcaggccacaacttaaaaa
ccctaagagatgtgactacactgaggcataatcctggtctcaagtgacag
agaccctttccagttaaccagccccaagtcctttctcaaggttctcggtt
gtcccaaatgagccccatgacctcagcaaccttcaaatcaagcaagatgt
aatagtttagaataagcaagctgggctacccacaagcccttcatgtatcc
ttttaccatcctcatgccaagagccttaaataaataacggttgccacata
ttcatattgctaaaaatctttcatatatgtcactaagtagataatttata
caatacagagatagtcagatgtttccatggcatctgggagtttatcaccc
cctttttatgcacaataatttatacatgcatttatttcactaggtcaata
ttaatgacaattagttgtcatttaagcatcaaatgagtcccagacttcta
ccatatattcctcagcatgcttataccaagatatttcctattctaatagt
tttacatttctaggatttgatatattttgatacgacactgaaagcaagac
catttctgaaagtatatacatgttttatcataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_96897106_96898193
seq2: B6Ng01-010H10.b_43_1113 (reverse)

seq1  ACAGTTCATAGTGGCATAGGAAAATGATACAAATGATTCTAATGTTAGAT  50
      |||| ||||||||||||| ||||||||| ||||||| ||| ||| |||||
seq2  ACAG-TCATAGTGGCATA-GAAAATGAT-CAAATGA-TCT-ATG-TAGAT  44

seq1  GCATCTACACCTAACTGGGCCAAGCTGCATAAGTTCAGTAAAATATTAAG  100
      |||||||||||| |||||||| ||||||||||| ||||||||||||| ||
seq2  GCATCTACACCT-ACTGGGCC-AGCTGCATAAG-TCAGTAAAATATT-AG  90

seq1  GTAAGCAGATTTGAATAATCATACAAAATACAAGGGATATCTAGCTAATA  150
      || ||||||||   ||||||||||||||||| |||||||||||||||   
seq2  GT-AGCAGATT--GATAATCATACAAAATAC-AGGGATATCTAGCTA--T  134

seq1  AGTAACAATTTCACCAGAACTTAAAGCTCATGCAAGGATATAGTAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACAATTTCACCAGAACTTAAAGCTCATGCAAGGATATAGTAAAATA  184

seq1  TCTGGGAGAGATTGTCAGAGCTGGAAGGAAGTCAATATCAGAAAAATTAA  250
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCTGGGAGAGATTGTCAGAGCTGGAAGGAAGTCAATATCAG-AAAATTAA  233

seq1  AGCAACAAAGCAAAGGCTTTGCTAGGAAGACACTGAAGGTAATGCGCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAAAGCAAAGGCTTTGCTAGGAAGACACTGAAGGTAATGCGCAAA  283

seq1  ATCTGGTCATGAAAATTGTTAAAGTTGAATCATGGTGGCAGGATCAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTCATGAAAATTGTTAAAGTTGAATCATGGTGGCAGGATCAGAAC  333

seq1  TTAAAAGAAATGGTAGAGTGCTTCGGGGATTATTTAATTGTCCAAAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGAAATGGTAGAGTGCTTCGGGGATTATTTAATTGTCCAAAATAC  383

seq1  ATAGTTAGGAGGCATTGTTGTTAGAAAATTATGCTCAGTCTCTCCCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTAGGAGGCATTGTTGTTAGAAAATTATGCTCAGTCTCTCCCTACA  433

seq1  TATTCAATATAGTACTCAAAGTCCTAGTCAGAGCAATTAGAGGTATCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAATATAGTACTCAAAGTCCTAGTCAGAGCAATTAGAGGTATCAAG  483

seq1  GTTTAAAAGGAAGTGGGAATTTTCATGAGAGAGAGCAACAGAGTCCAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAAGGAAGTGGGAATTTTCATGAGAGAGAGCAACAGAGTCCAGAT  533

seq1  GCTGCATTCTCAAAACAGGTTACAGCATGGCACAGTTTAGAGTCATACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATTCTCAAAACAGGTTACAGCATGGCACAGTTTAGAGTCATACTG  583

seq1  GCCTTTCGCCTCTAAATGTTTTCTATGCAGGAATTCCTAGATATAAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCGCCTCTAAATGTTTTCTATGCAGGAATTCCTAGATATAAAGTT  633

seq1  AAACCATCTGCAGTTGAACAGACCATCCCACTGTGAAGCTGTAAGTCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATCTGCAGTTGAACAGACCATCCCACTGTGAAGCTGTAAGTCATC  683

seq1  ATTGAAAGAAATGAACTACTGTTAGATATTACAATATGCATCTTCAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAGAAATGAACTACTGTTAGATATTACAATATGCATCTTCAAAAG  733

seq1  TTAAGAATTGCTTTGACCGACTGGTAACAGGGCTCATCTGCAGTTACTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAATTGCTTTGACCGACTGGTAACAGGGCTCATCTGCAGTTACTTT  783

seq1  AGGCTCACCAATTTCCCTTGTGGCAGAATATCCAGCTTTTAAGACATGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCACCAATTTCCCTTGTGGCAGAATATCCAGCTTTTAAGACATGTG  833

seq1  TCTATGTGCCATGCTCCAGAAATATCTTTGCCTCTTGTCACGAGTCCTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTGCCATGCTCCAGAAATATCTTTGCCTCTTGTCACGAGTCCTTC  883

seq1  CCTCTGTAATTTGGATGAGGACGGGAAAATACAGTTTTCCAAGTCTCGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTAATTTGGATGAGGACGGGAAAATACAGTTTTCCAAGTCTCGTC  933

seq1  ATTTCAACCTCTAGAATGAGAAATCAGAAATGAACTATTGAATTATTTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAACCTCTAGAATGAGAAATCAGAAATGAACTATTGAATTATTTAT  983

seq1  TCAGCAAGTCTCTTTGGTTCCCCTGACGAATGATCAGGATACATTCCATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAAGTCTCTTTGGTTCCCCTGACGAATGATCAGGATACATTCCATT  1033

seq1  ATAGTTTCATTTCATTCATAAACCCATCACTTGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTCATTTCATTCATAAACCCATCACTTGAATTC  1071

seq1: chr10_96755046_96756088
seq2: B6Ng01-010H10.g_64_1097

seq1  GAATTCACTGGGCCATTTCTCCTAGAAGTAACATATAGCCCAGGGCTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGGCCATTTCTCCTAGAAGTAACATATAGCCCAGGGCTTTA  50

seq1  AAGGAAAATGACTTGAGGTGATGGCAGGTCCAGGGAGAGAACTGGGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAATGACTTGAGGTGATGGCAGGTCCAGGGAGAGAACTGGGAAGT  100

seq1  GGGTTCTGGAATAGACTCAGGATCCCACTAAATGGAGCAAAGTGATATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTGGAATAGACTCAGGATCCCACTAAATGGAGCAAAGTGATATAC  150

seq1  TAATGTCCACCTGAGTGAGAGGCTTAGAACATTCATTAGGCATTTAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCCACCTGAGTGAGAGGCTTAGAACATTCATTAGGCATTTAGCTC  200

seq1  CAGCAAAGGAAAGAATCCAGTGGTCTAATCTTGTGTTCAAAGTTTTCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAGGAAAGAATCCAGTGGTCTAATCTTGTGTTCAAAGTTTTCTAC  250

seq1  GGTTAGCATTAGTAGGTGGAGGCCATGCTTTTGACAGGACATGCACTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGCATTAGTAGGTGGAGGCCATGCTTTTGACAGGACATGCACTGCC  300

seq1  ACTGTTCCCTGTGTAAATAATCTTCAGTCAGCATTTAGGGTCATGAGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCCCTGTGTAAATAATCTTCAGTCAGCATTTAGGGTCATGAGGAT  350

seq1  AAGTGTTCTATAATTATGCTGTATTTTTCTCCAAATCCAATCGTGATTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTCTATAATTATGCTGTATTTTTCTCCAAATCCAATCGTGATTCC  400

seq1  TACAGTTTAGCCATAGGAACCAGCATTTACATCAGGCCACAACTTAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTTAGCCATAGGAACCAGCATTTACATCAGGCCACAACTTAAAAA  450

seq1  CCCTAAGAGATGTGACTACACTGAGGCATAATCCTGGTCTCAAGTGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGAGATGTGACTACACTGAGGCATAATCCTGGTCTCAAGTGACAG  500

seq1  AGACCCTTTCCAGTTAACCAGCCCCAAGTCCTTTCTCAAGGTTCTCGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTTTCCAGTTAACCAGCCCCAAGTCCTTTCTCAAGGTTCTCGGTT  550

seq1  GTCCCAAATGAGCCCCATGACCTCAGCAACCTTCAAATCAAGCAAGATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAAATGAGCCCCATGACCTCAGCAACCTTCAAATCAAGCAAGATGT  600

seq1  AATAGTTTAGAATAAGCAAGCTGGGCTACCCACAAGCCCTTCATGTATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTTAGAATAAGCAAGCTGGGCTACCCACAAGCCCTTCATGTATCC  650

seq1  TTTTACCATCCTCATGCCAAGAGCCTTAAATAAATAACGGTTGCCACATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCATCCTCATGCCAAGAGCCTTAAATAAATAACGGTTGCCACATA  700

seq1  TTCATATTGCTAAAAATCTTTCATATATGTCACTAAGTAGATAATTTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTGCTAAAAATCTTTCATATATGTCACTAAGTAGATAATTTATA  750

seq1  CAATACAGAGATAGTCAGATGTTTCCATGGCATCTGGGAGTTTATCACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACAGAGATAGTCAGATGTTTCCATGGCATCTGGGAGTTTATCACCC  800

seq1  CCTTTTTATGCACAATAATTTATACATGCATTTATTTCACTAGGTCAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTATGCACAATAATTTATACATGCATTTATTTCACTAGGTCAATA  850

seq1  TTAATGACAATTAGTTGTCATTTAAGCATCAAATGAGTCCCAGACTTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGACAATTAGTTGTCATTTAAGCATCAAATGAGTCCCAGACTTCTA  900

seq1  CCATATATTTCCTCAAGCATGCTTATACCAAGATATTTCCTATTCTAATT  950
      ||||||| |||||| ||||||||||||||||||||||||||||||||| |
seq2  CCATATA-TTCCTC-AGCATGCTTATACCAAGATATTTCCTATTCTAA-T  947

seq1  AGTTTTAACATTTCTAGGATTTGATATATTTTGATAGGACACTGAAAGCA  1000
      |||||| ||||||||||||||||||||||||||||| |||||||||||||
seq2  AGTTTT-ACATTTCTAGGATTTGATATATTTTGATACGACACTGAAAGCA  996

seq1  AGGAACCATTTTCTGAAAAGTATATACATGTTTTATTCATAAA  1043
      ||  |||| |||||| ||||||||||||||||||| |||||||
seq2  AG--ACCA-TTTCTG-AAAGTATATACATGTTTTA-TCATAAA  1034