BAC Information

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BAC

Clone NameB6Ng01-010H19
Chromosome10 (Build37)14 (Build37)
Map Location 104,053,903 - 104,054,36361,928,937 - 61,930,023
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010H19.bB6Ng01-010H19.g
ACCDH846144DH846145
length8761,081
definitionDH846144|Mus musculus domesticus DNA, BAC clone: B6Ng01-010H19, 5' end.DH846145|Mus musculus domesticus DNA, BAC clone: B6Ng01-010H19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(61,928,937 - 61,930,023)
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatgtcacatcagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaagaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaagcagtctggtggttcctca
caaaattggacatagtactactggaagatcccgcaatacctctcctgggc
atatatccagaagatgttccaactagtaagaaagacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatgcaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcaaataatatgtactcactgataagtggatattagcccagagac
ttagaatacccaagatataagatacaatttgctaaacacatgaaactcaa
gaagaatgaagaccaaagtgtggacactttgccccttcttagaattgcga
acaaaacacccatggaagagttacagagacaaagtttggagctgagacaa
aggatggaccatctagagactgccatatccagggttccatcccataatca
gcctccaaacgctgacacattgcatacactagcaagattttgctgaagga
ccctgatatagctgtctcttgtgaga
gaattctttaaaacacacacacacacacacacacacacacacacacacac
acaaacatgcacacgcacacagtattctagaggctttttatatggtgtgg
aaaagttcttggctctgactcaaatttgcctgaatcagcagtggttgtca
gtaggtactggagagaccaatgtgcaggtcctgggaggagttctaaaaag
ttagcataccctgacctggcttctccactctctggaatgcagtgtgctgc
cacttctgagtttaggccccaggaaggaaacaggagggtcagagaccaca
gagtgagaaatgaaaatgcctttctgcagcctctcctgaacacggttggt
cggctgctgcttccttcgcctctactttaactacttaggaaggacgctgg
agttctgcatcttcaggtggttctccgccagcaccagaggccagtcagct
gctgttgactcacacttcctcacttcctgggcttttcagggtccagcctg
ggtctgaaacccttccctaaaatgacttgttttgttctagggtaggagct
cagtgcatgcatgcatggatttgcatttcttcagaaaagagtagctgatg
tgcgtcctcagcctttctgcaggaggatttactaggggccatcatgggct
ctgtgaattccagaggtcacaaggcagaggcccaggtggtaatgatgggc
ctcgactctgctggcaagaccacaattctgtacaaactgaaaggaaacca
gctggtggacaccctacccactgttggttttaatgtagagcctcttgagg
ctcctggatatgtgtcactgactctctgggacattgggggacacacccag
ctcagagctacctggaggactacctggaatgcatcgacctccttgtgtac
gtgctggacagcacagatgaagcccgcttgcctgaggcagtgctgagctc
aagaagtcctgcaagaacccaacagaccggcatcctcttcttagaactga
caacaagcaggaggcttcttgttgctctgccgttgtatgaatatgaaaac
agctgggcctgtatggtttccaaagcattgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-010H19.b_43_513 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          ||||||||||||||||||||||||||| || |
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATTTTTTGCA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| ||||||||||||||||| |||||||  ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCTTTCTTACTAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||  |||||||||||||||||||||| ||||||||||| ||||| ||| 
seq2  TGGAACATCTTCTGGATATATGCCCAGGAGAGGTATTGCGGGATCTTCCA  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||| ||| ||||| |||||| | ||||||||||
seq2  GTAGTACTATGTCCAATTTTGTGAGGAACCACCAGACTGCTTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      |||||||||||| |||||||||||||||||||||||||||||| ||||||
seq2  GGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCTTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      ||||||||| |||||  |||||||||||||||||||||||||||||||||
seq2  TTCTGACTGATGTGACATGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  CTGATGATTAAGGATGCTGAACATTTTTTCAGGTGCTTCTCAGCCATTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471

seq1: chr14_61928937_61930023
seq2: B6Ng01-010H19.g_63_1143

seq1  GAATTCTTTAAAACACACACACACACACACACACACACACACACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAACACACACACACACACACACACACACACACACACACAC  50

seq1  ACAAACATGCACACGCACACAGTATTCTAGAGGCTTTTTATATGGTGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACATGCACACGCACACAGTATTCTAGAGGCTTTTTATATGGTGTGG  100

seq1  AAAAGTTCTTGGCTCTGACTCAAATTTGCCTGAATCAGCAGTGGTTGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTCTTGGCTCTGACTCAAATTTGCCTGAATCAGCAGTGGTTGTCA  150

seq1  GTAGGTACTGGAGAGACCAATGTGCAGGTCCTGGGAGGAGTTCTAAGAAG  200
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTAGGTACTGGAGAGACCAATGTGCAGGTCCTGGGAGGAGTTCTAAAAAG  200

seq1  TTAGCATACCCTGACCTGGCTTCTCCACTCTCTGGAATGCAGTGTGCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATACCCTGACCTGGCTTCTCCACTCTCTGGAATGCAGTGTGCTGC  250

seq1  CACTTCTGAGTTTAGGCCCCAGGAAGGAAACAGGAGGGTCAGAGACCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGAGTTTAGGCCCCAGGAAGGAAACAGGAGGGTCAGAGACCACA  300

seq1  GAGTGAGAAATGAAAATGCCTTTCTGCAGCCTCTCCTGAACACGGTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGAAATGAAAATGCCTTTCTGCAGCCTCTCCTGAACACGGTTGGT  350

seq1  CGGCTGCTGCTTCCTTCGCCTCTACTTTAACTACTTAGGAAGGACGCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTGCTGCTTCCTTCGCCTCTACTTTAACTACTTAGGAAGGACGCTGG  400

seq1  AGTTCTGCATCTTCAGGTGGTTCTCCGCCAGCACCAGAGGCCAGTCAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGCATCTTCAGGTGGTTCTCCGCCAGCACCAGAGGCCAGTCAGCT  450

seq1  GCTGTTGACTCACACTTCCTCACTTCCTGGGCTTTTCAGGGTCCAGCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTGACTCACACTTCCTCACTTCCTGGGCTTTTCAGGGTCCAGCCTG  500

seq1  GGTCTGAAACCCTTCCCTAAAATGACTTGTTTTGTTCTAGGGTAGGAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGAAACCCTTCCCTAAAATGACTTGTTTTGTTCTAGGGTAGGAGCT  550

seq1  CAGTGCATGCATGCATGGATTTGCATTTCTTCAGAAAAGAGTAGCTGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCATGCATGCATGGATTTGCATTTCTTCAGAAAAGAGTAGCTGATG  600

seq1  TGCGTCCTCAGCCTTTCTGCAGGAGGATTTACTAGGGGCCATCATGGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTCCTCAGCCTTTCTGCAGGAGGATTTACTAGGGGCCATCATGGGCT  650

seq1  CTGTGAATTCCAGAGGTCACAAGGCAGAGGCCCAGGTGGTAATGATGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAATTCCAGAGGTCACAAGGCAGAGGCCCAGGTGGTAATGATGGGC  700

seq1  CTCGACTCTGCTGGCAAGACCACAATTCTGTACAAACTGAAAGGAAACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGACTCTGCTGGCAAGACCACAATTCTGTACAAACTGAAAGGAAACCA  750

seq1  GCTGGTGGACACCCTACCCACTGTTGGTTTTAATGTAGAGCCTCTTGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGGACACCCTACCCACTGTTGGTTTTAATGTAGAGCCTCTTGAGG  800

seq1  CTCCTGGACATGTGTCACTGACTCTCTGGGACATTGGGGGACAGACCCAG  850
      |||||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  CTCCTGGATATGTGTCACTGACTCTCTGGGACATTGGGGGACACACCCAG  850

seq1  CTCAGAGCTACCTGGAAGGACTACCTGGAAGGCATCGACCTCCTTGTGTA  900
      ||||||||||||||| |||||||||||||| |||||||||||||||||||
seq2  CTCAGAGCTACCTGG-AGGACTACCTGGAATGCATCGACCTCCTTGTGTA  899

seq1  CGTGCTGGACAGCACAGATGAAGCCCGCTTGCCTGAGGCAGTGGCTGAGC  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CGTGCTGGACAGCACAGATGAAGCCCGCTTGCCTGAGGCAGT-GCTGAGC  948

seq1  TCAAGGAAGTCCTGGAAGACCCCAACATGGCCGGCGTCCCCTTCTTGGTA  1000
      |||| ||||||||| |||| ||||||| | ||||| ||| |||||| | |
seq2  TCAA-GAAGTCCTGCAAGAACCCAACA-GACCGGCATCCTCTTCTTAGAA  996

seq1  CTGGCCAACAAGCAGGAGGC-TCCTGGTGCTCTGCCGTTGCTTGAA-ATC  1048
      || | ||||||||||||||| || || |||||||||||||  |||| || 
seq2  CT-GACAACAAGCAGGAGGCTTCTTGTTGCTCTGCCGTTGTATGAATATG  1045

seq1  AGAAACAGGCTGGGCCTGGAAGGGTTCCAAAAGCATTGC  1087
      | ||||| |||||||||| | || |||| ||||||||||
seq2  A-AAACA-GCTGGGCCTGTATGGTTTCC-AAAGCATTGC  1081