BAC Information

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BAC

Clone NameB6Ng01-010P22
Chromosome10 (Build37)
Map Location 56,673,357 - 56,878,889
singlet/doubletdoublet
Overlap genenone
Upstream geneD630037F22Rik, 1700060H10Rik, EG629732, Gja1, EG668347, LOC100042622, LOC668355, LOC100042628, EG629739
Downstream geneLOC629742, LOC668363, Hsf2, Serinc1, LOC211619, LOC668374, Pkib, Ppia-ps10_506.1, Fabp7, Smpdl3a, EG664783, 4933403O03Rik, EG245263, Gcc2, Lims1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010P22.bB6Ng01-010P22.g
ACCDH846502DH846503
length1,0471,104
definitionDH846502|Mus musculus domesticus DNA, BAC clone: B6Ng01-010P22, 5' end.DH846503|Mus musculus domesticus DNA, BAC clone: B6Ng01-010P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,673,357 - 56,674,410)(56,877,767 - 56,878,889)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttgcatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttgttgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagccttgactctttctaat
tgatggcatgtatatcccatgcctgtttgtctgatatttttgtgtgagct
gtttgttttgtatgtatgagtgtgcacatataagtatgagagcacgcatg
cctgtgcacccatataatgaggccaaagaaggatgctgagtgtctttttg
catcatcctccatcatatttctttgagataatatcttcacaaaacttgaa
gtttccttttcattggttaggctagctagtcagtgagatctgttacctcc
ttccgttctgggcttacaagaacacagtcatatcttccctcccccccccc
attgttctttttttttattagatattttctttataaacttttcaaatgct
atcccaaaagttccctataccctccccccgccctgctcctctacccactc
actcccgcttcttggccctggcattcccctgtactggggcatataaagtt
tgcaataccaaagggcctctcttcccactgatggctgactaggccatctt
ctgctacataatgcagctagagatacgagctctgggggtactggttagtt
catattgttgttccaccaataggggtgcagaccccttcagctccttgggt
actttctctagtttctacattgggggccctgtgttccatcttatagatga
ctgtgagcatccactctgtatttgccagcactggcatagcctcatatgaa
acagcttataacaggtcctttcagcaaatctttctggcatatgcaatagt
atctgcgtctaaatgccgaaagctggaagacccgaaattccctcaac
gaattcagagccccatttctctgacaacattttctaacaatagacaggca
actgaatgattgagtacattttttgtatcttatctatctctcattatggg
aaattggtctgtgctccacagtagatacaggtgtagtgtagatgttaggt
gctccaatgattgctttctccacaccatttcagaacagtaaacctgggaa
aaatgactctgtcacaagctctggggtctatgtgagacttgttttggggg
caattatttccaaatacaagaaattacaaactgcatgacctccctggagg
gaaaacttgaaacactcctgcctaaaacagaaaatttggacatctaagtt
atgtaaaatgacaaacacattgaaaacatggaagaaacttctcaggagat
taaaacaaataccacagggtacagcgtagaagagagtgctgatttaacat
ggtatcgttgtgcaaacattgggtgttaccagtcaaaagtctaacatcct
ttacagcttgcattcagagaaaatgatgctgaatggaattttaacctgat
tgatagaggagtagatagcaatttcatattatacaatagcattcaaatag
taatggcaataagatgtaggattaatgatacactgcaacttatggattgt
agggagaaatcagaattccctttggatggaagaagacttctagatagaaa
taaaatcctggtctcctgcagcaaggtctagagatgtagaaggtcagctc
ctggaagatacatttgcgtcctgatgaattgtaatcaccacaggtggatc
aacctatctcttttggcatgttgaaaggaacacaaagactgcttggaagg
aggcctgttggagccacagtctccattctaaataaatgcaaaatctctgc
ttgttgctccttgatgaatggggtacttgcagagatgacatctgcatgct
tgagttgattccactttgaggagtctcagttcttaatagtttacctcagc
tacatggcagatcagagttgtttagttaatgttaagctgctaaatcttca
ttacatgttttaataaatacagccggacttatgcactgtaaataatctca
ataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_56673357_56674410
seq2: B6Ng01-010P22.b_46_1092

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGCATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGCATATTAGTCCC  100

seq1  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT  150

seq1  CTTTGTCTTGTTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCTTGTTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200

seq1  TTAGGTCCCATTTGTCAATTCTCGATCTTACAGCCTTGACTCTTTCTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCCCATTTGTCAATTCTCGATCTTACAGCCTTGACTCTTTCTAAT  250

seq1  TGATGGCATGTATATCCCATGCCTGTTTGTCTGATATTTTTGTGTGAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCATGTATATCCCATGCCTGTTTGTCTGATATTTTTGTGTGAGCT  300

seq1  GTTTGTTTTGTATGTATGAGTGTGCACATATAAGTATGAGAGCACGCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTGTATGTATGAGTGTGCACATATAAGTATGAGAGCACGCATG  350

seq1  CCTGTGCACCCATATAATGAGGCCAAAGAAGGATGCTGAGTGTCTTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCACCCATATAATGAGGCCAAAGAAGGATGCTGAGTGTCTTTTTG  400

seq1  CATCATCCTCCATCATATTTCTTTGAGATAATATCTTCACAAAACTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCCTCCATCATATTTCTTTGAGATAATATCTTCACAAAACTTGAA  450

seq1  GTTTCCTTTTCATTGGTTAGGCTAGCTAGTCAGTGAGATCTGTTACCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTTTTCATTGGTTAGGCTAGCTAGTCAGTGAGATCTGTTACCTCC  500

seq1  TTCCGTTCTGGGCTTACAAGAACACAGTCATATCTTCCCTCCCCCCCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGTTCTGGGCTTACAAGAACACAGTCATATCTTCCCTCCCCCCCCCC  550

seq1  ATTGTTCTTTTTTTTTATTAGATATTTTCTTTATAAACTTTTCAAATGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCTTTTTTTTTATTAGATATTTTCTTTATAAACTTTTCAAATGCT  600

seq1  ATCCCAAAAGTTCCCTATACCCTCCCCCCGCCCTGCTCCTCTACCCACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAAAGTTCCCTATACCCTCCCCCCGCCCTGCTCCTCTACCCACTC  650

seq1  ACTCCCGCTTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCGCTTCTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTT  700

seq1  TGCAATACCAAAGGGCCTCTCTTCCCACTGATGGCTGACTAGGCCATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATACCAAAGGGCCTCTCTTCCCACTGATGGCTGACTAGGCCATCTT  750

seq1  CTGCTACATAATGCAGCTAGAGATACGAGCTCTGGGGGTACTGGTTAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTACATAATGCAGCTAGAGATACGAGCTCTGGGGGTACTGGTTAGTT  800

seq1  CATATTGTTGTTCCACCAATAGGGTTGCAGACCCCTTCAGCTCCTTGGGT  850
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CATATTGTTGTTCCACCAATAGGGGTGCAGACCCCTTCAGCTCCTTGGGT  850

seq1  ACTTTCTCTAGTTTCTACATTGGGGGCCCTGTGTTCCATCTTATAGATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTCTAGTTTCTACATTGGGGGCCCTGTGTTCCATCTTATAGATGA  900

seq1  CTGTGAGCATCCACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATATG  950
      |||||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  CTGTGAGCATCCAC-TCTGTATTTGCCA-GCACTGGCATAGCCTCATATG  948

seq1  AAACAGC-TATAACAGGGTCCTTTCAGCAAAATCTTTCTGGCATATGCAA  999
      ||||||| ||||||| |||||||||||| |||||||||||||||||||||
seq2  AAACAGCTTATAACA-GGTCCTTTCAGC-AAATCTTTCTGGCATATGCAA  996

seq1  TAGTATCTGCGTTTATAATAGCCAGAAGCTGGAAAGAACCCAGATATCCC  1049
      |||||||||||| || ||| |||  ||||||| |||| || | || ||||
seq2  TAGTATCTGCGTCTA-AAT-GCCGAAAGCTGG-AAGACCCGAAAT-TCCC  1042

seq1  TCAAC  1054
      |||||
seq2  TCAAC  1047

seq1: chr10_56877767_56878889
seq2: B6Ng01-010P22.g_66_1169 (reverse)

seq1  TTATTGAGTATTATTATCAGTGCATAAAGTCCACGCCTTGTATTTATTAA  50
      |||||||| ||||||  |||||||| |||||  || | ||||||||||||
seq2  TTATTGAG-ATTATTTACAGTGCAT-AAGTC--CGGC-TGTATTTATTAA  45

seq1  AACATGTAATGAAGGATTTTAAGCAGCTTACAATTAACTAAACAAACTTC  100
      ||||||||||||| |||||  |||||||||  |||||||||||||   ||
seq2  AACATGTAATGAA-GATTT--AGCAGCTTAACATTAACTAAACAA--CTC  90

seq1  TGATTCTGCCCATTGTAGCTGAGGTAAACTATTAAGAACCTGAGACTCCT  150
      ||| ||||||   ||||||||||||||||||||||||| |||||||||| 
seq2  TGA-TCTGCC--ATGTAGCTGAGGTAAACTATTAAGAA-CTGAGACTCC-  135

seq1  TCAAAGT-GAATCAACTTCAAGCATGCAGATGTCCATCTCCTTGCAAGTA  199
      ||||||| |||||||| |||||||||||||||| ||||||  ||||||||
seq2  TCAAAGTGGAATCAAC-TCAAGCATGCAGATGT-CATCTC--TGCAAGTA  181

seq1  CCCCATTCATCAAGGAGCAACAAGCAGAGATTTTTGCATTTATTTTAGAA  249
      |||||||||||||||||||||||||||||| ||||||||||| |||||||
seq2  CCCCATTCATCAAGGAGCAACAAGCAGAGA-TTTTGCATTTA-TTTAGAA  229

seq1  TGGAGACTGTGGCTCCAACAGGCCTCCTTCCAAGCAGTCTTTGTGTTCC-  298
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGGAGACTGTGGCTCCAACAGGCCTCCTTCCAAGCAGTCTTTGTGTTCCT  279

seq1  TTCAACATGCCAAAAGAGATAGGTTGATCCACCTGTGGTGATTACAATTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATGCCAAAAGAGATAGGTTGATCCACCTGTGGTGATTACAATTC  329

seq1  ATCAGGACGCAAATGTATCTTCCAGGAGCTGACCTTCTACATCTCTAGAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGACGCAAATGTATCTTCCAGGAGCTGACCTTCTACATCTCTAGAC  379

seq1  CTTGCTGCAGGAGACCAGGATTTTATTTCTATCTAGAAGTCTTCTTCCAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGCAGGAGACCAGGATTTTATTTCTATCTAGAAGTCTTCTTCCAT  429

seq1  CCAAAGGGAATTCTGATTTCTCCCTACAATCCATAAGTTGCAGTGTATCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGGAATTCTGATTTCTCCCTACAATCCATAAGTTGCAGTGTATCA  479

seq1  TTAATCCTACATCTTATTGCCATTACTATTTGAATGCTATTGTATAATAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCTACATCTTATTGCCATTACTATTTGAATGCTATTGTATAATAT  529

seq1  GAAATTGCTATCTACTCCTCTATCAATCAGGTTAAAATTCCATTCAGCAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGCTATCTACTCCTCTATCAATCAGGTTAAAATTCCATTCAGCAT  579

seq1  CATTTTCTCTGAATGCAAGCTGTAAAGGATGTTAGACTTTTGACTGGTAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTCTGAATGCAAGCTGTAAAGGATGTTAGACTTTTGACTGGTAA  629

seq1  CACCCAATGTTTGCACAACGATACCATGTTAAATCAGCACTCTCTTCTAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAATGTTTGCACAACGATACCATGTTAAATCAGCACTCTCTTCTAC  679

seq1  GCTGTACCCTGTGGTATTTGTTTTAATCTCCTGAGAAGTTTCTTCCATGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTACCCTGTGGTATTTGTTTTAATCTCCTGAGAAGTTTCTTCCATGT  729

seq1  TTTCAATGTGTTTGTCATTTTACATAACTTAGATGTCCAAATTTTCTGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATGTGTTTGTCATTTTACATAACTTAGATGTCCAAATTTTCTGTT  779

seq1  TTAGGCAGGAGTGTTTCAAGTTTTCCCTCCAGGGAGGTCATGCAGTTTGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCAGGAGTGTTTCAAGTTTTCCCTCCAGGGAGGTCATGCAGTTTGT  829

seq1  AATTTCTTGTATTTGGAAATAATTGCCCCCAAAACAAGTCTCACATAGAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTGTATTTGGAAATAATTGCCCCCAAAACAAGTCTCACATAGAC  879

seq1  CCCAGAGCTTGTGACAGAGTCATTTTTCCCAGGTTTACTGTTCTGAAATG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGCTTGTGACAGAGTCATTTTTCCCAGGTTTACTGTTCTGAAATG  929

seq1  GTGTGGAGAAAGCAATCATTGGAGCACCTAACATCTACACTACACCTGTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGAGAAAGCAATCATTGGAGCACCTAACATCTACACTACACCTGTA  979

seq1  TCTACTGTGGAGCACAGACCAATTTCCCATAATGAGAGATAGATAAGATA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGTGGAGCACAGACCAATTTCCCATAATGAGAGATAGATAAGATA  1029

seq1  CAAAAAATGTACTCAATCATTCAGTTGCCTGTCTATTGTTAGAAAATGTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAATGTACTCAATCATTCAGTTGCCTGTCTATTGTTAGAAAATGTT  1079

seq1  GTCAGAGAAATGGGGCTCTGAATTC  1123
      |||||||||||||||||||||||||
seq2  GTCAGAGAAATGGGGCTCTGAATTC  1104