BAC Information

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BAC

Clone NameB6Ng01-011I08
Chromosome10 (Build37)
Map Location 111,656,710 - 111,798,789
singlet/doubletdoublet
Overlap geneKcnc2
Upstream geneOsbpl8, Bbs10, Nap1l1, EG382421, Phlda1, Krr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2
Downstream geneLOC100042639, 4921506J03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011I08.bB6Ng01-011I08.g
ACCDH846881DH846882
length7621,027
definitionDH846881|Mus musculus domesticus DNA, BAC clone: B6Ng01-011I08, 5' end.DH846882|Mus musculus domesticus DNA, BAC clone: B6Ng01-011I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,656,710 - 111,657,471)(111,797,753 - 111,798,789)
sequence
gaattcttcatatttttctagattttctgaactacttaaaattattctaa
cttgattgtgacatttcacatctcagtacctgctttgttactgccatcca
aaatggttatctccacttgttagatctaaacccagacattctgtgcttct
ggtacctaaaatgatccttctaaaggatcatagaaacttctaaagctgat
gcacttgtacctttgagatctgcagggcacaccaagtatgctgttaatat
aatatttactaatgcacaccacgataccactttgcttatgttctttccac
tagacagggaaatcccacgagcatagccacagtgcacatttcttactctg
tgaacccggtttccagccctgtgtgttacatgggccaggcattatgcaat
gctatcaggctgcatgtgagaatcaaggggcagcagttgttggggtcttt
gcattgcaaccacatctgcactaaaggacctttagccaaagccatataag
gagtctaaatatggttttaagcacaagctccacaatgcaagcaggaaatt
tacaatatagaatgaactgtttcagttagacaagagtaatttctgtttct
agtgatcacagtattgtgactatagtaaaagtgatatcttatgtatctag
aattgctgaaagtagattttaaatgtatttttaacaaggcatgattaagt
aacctggcagaactgtacatgcctgtagtcccagcacagagagggtggag
ggagggggattt
gaattcatctgttttattccagtccctgaccttgactagcacaagataga
cccaaaaaagctctatgtaagataaatgcatggatgatgggattcgttaa
atagcaaaaacattgaatgatccctttgtgccagcaggcaatgagaaggc
tttgaagatgaagcacacctaagttatggtttaatgagtatgcagaaatc
accacagcatagaaggtcatgaaaataacaaaaaggagctcactcattct
catcagtgtgtatgttaaaatttgggagtgcatagattattgtattggcc
ttaagtatcgtttggttttttttgttttgttttgttttgttggttttttt
tttttttttgaagaaagccacaccatcatttacttttggctcttatgtct
tatagtctctcaggataactgatcacatgattttccaagcatcttcacat
gttataagttcatagcaagttaaagacaatagttcatgtaatacaggcat
gcataaagttcatgtcagaaagaattgcagcagaaatgtttgcatgtctt
tccaactaagactagtacctgactaaacattcattatctgttactagctt
ttaaactatacaaatagcagcaatgtcataaaggatttctcttaataatg
aaaattatttgtatgctgaataaacgaggtcagaatcaagtaaaaatgaa
gcagcaattgaagaaagcaaagctctgattcaatccaccctttaacacag
ataatctgacaatcgtgaatgactctccagcatctgccagtcagaaacaa
atccatcccatctgttagggctcctcatgactgctgtttgggatgcacca
atgcacccatgtgcaaacgcctttcaggatattactagaataaggcttat
gttgagaaaggcctaaggctagaggcactgaggtacttaaaatatatcac
caaagcaacaaatgtatatacaacaacgtcacttcagatggggaaagctg
gctatgatgcgcaaataagacacagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_111656710_111657471
seq2: B6Ng01-011I08.b_46_807

seq1  GAATTCTTCATATTTTTCTAGATTTTCTGAACTACTTAAAATTATTCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATATTTTTCTAGATTTTCTGAACTACTTAAAATTATTCTAA  50

seq1  CTTGATTGTGACATTTCACATCTCAGTACCTGCTTTGTTACTGCCATCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTGTGACATTTCACATCTCAGTACCTGCTTTGTTACTGCCATCCA  100

seq1  AAATGGTTATCTCCACTTGTTAGATCTAAACCCAGACATTCTGTGCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTTATCTCCACTTGTTAGATCTAAACCCAGACATTCTGTGCTTCT  150

seq1  GGTACCTAAAATGATCCTTCTAAAGGATCATAGAAACTTCTAAAGCTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCTAAAATGATCCTTCTAAAGGATCATAGAAACTTCTAAAGCTGAT  200

seq1  GCACTTGTACCTTTGAGATCTGCAGGGCACACCAAGTATGCTGTTAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTGTACCTTTGAGATCTGCAGGGCACACCAAGTATGCTGTTAATAT  250

seq1  AATATTTACTAATGCACACCACGATACCACTTTGCTTATGTTCTTTCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTACTAATGCACACCACGATACCACTTTGCTTATGTTCTTTCCAC  300

seq1  TAGACAGGGAAATCCCACGAGCATAGCCACAGTGCACATTTCTTACTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGGGAAATCCCACGAGCATAGCCACAGTGCACATTTCTTACTCTG  350

seq1  TGAACCCGGTTTCCAGCCCTGTGTGTTACATGGGCCAGGCATTATGCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCGGTTTCCAGCCCTGTGTGTTACATGGGCCAGGCATTATGCAAT  400

seq1  GCTATCAGGCTGCATGTGAGAATCAAGGGGCAGCAGTTGTTGGGGTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCAGGCTGCATGTGAGAATCAAGGGGCAGCAGTTGTTGGGGTCTTT  450

seq1  GCATTGCAACCACATCTGCACTAAAGGACCTTTAGCCAAAGCCATATAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGCAACCACATCTGCACTAAAGGACCTTTAGCCAAAGCCATATAAG  500

seq1  GAGTCTAAATATGGTTTTAAGCACAAGCTCCACAATGCAAGCAGGAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTAAATATGGTTTTAAGCACAAGCTCCACAATGCAAGCAGGAAATT  550

seq1  TACAATATAGAATGAACTGTTTCAGTTAGACAAGAGTAATTTCTGTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATATAGAATGAACTGTTTCAGTTAGACAAGAGTAATTTCTGTTTCT  600

seq1  AGTGATCACAGTATTGTGACTATAGTAAAAGTGATATCTTATGTATCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATCACAGTATTGTGACTATAGTAAAAGTGATATCTTATGTATCTAG  650

seq1  AATTGCTGAAAGTAGATTTTAAATGTATTTTTAACAAGGCATGATTAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTGAAAGTAGATTTTAAATGTATTTTTAACAAGGCATGATTAAGT  700

seq1  AACCTGGCAGAACTGTACATGCCTGTAGTCCCAGCACAGAGAGGGTGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGCAGAACTGTACATGCCTGTAGTCCCAGCACAGAGAGGGTGGAG  750

seq1  GGAGGGGGATTT  762
      ||||||||||||
seq2  GGAGGGGGATTT  762

seq1: chr10_111797753_111798789
seq2: B6Ng01-011I08.g_64_1090 (reverse)

seq1  CACTGTGTCTTTATTTGCGGCATCATAGCCAGCTTTCCCCATCTGAATGT  50
      ||||||||| |||||||| |||||||||||||||||||||||||||| ||
seq2  CACTGTGTC-TTATTTGC-GCATCATAGCCAGCTTTCCCCATCTGAA-GT  47

seq1  GAACGTTTGTTGTAATATACATTTGTTTGCTTTGGTGGATAGTATTTTAA  100
      | ||| ||||||| ||||||||||| |||||||||| |||| ||||||||
seq2  G-ACG-TTGTTGT-ATATACATTTG-TTGCTTTGGT-GATA-TATTTTAA  91

seq1  GTACCTCAGTTGCCTCTAAGCCTTAGGCCTTTTCTCAACATATG-CTTAT  149
      ||||||||| ||||||| ||||||||||| |||||||||||| | |||||
seq2  GTACCTCAG-TGCCTCT-AGCCTTAGGCC-TTTCTCAACATAAGCCTTAT  138

seq1  TCTAGTAATATCCTGAAAGGCGTTTGCACATGGGTGCATTGGTGCAT-CC  198
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCTAGTAATATCCTGAAAGGCGTTTGCACATGGGTGCATTGGTGCATCCC  188

seq1  AAACAGCAGTCATTGAGGAGCCCTAACAGATGGGATGGATTTGTTTCTGA  248
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAACAGCAGTCA-TGAGGAGCCCTAACAGATGGGATGGATTTGTTTCTGA  237

seq1  CTGGCAGATGCTGGAGAGTCATTCACGATTGTCAGATTATCTGTGTTAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGATGCTGGAGAGTCATTCACGATTGTCAGATTATCTGTGTTAAA  287

seq1  GGGTGGATTGAATCAGAGCTTTGCTTTCTTCAATTGCTGCTTCA-TTTTA  347
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGGTGGATTGAATCAGAGCTTTGCTTTCTTCAATTGCTGCTTCATTTTTA  337

seq1  CTTGATTCTGACCTCGTTTATTCAGCATACAAATAATTTTCATTATTAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTCTGACCTCGTTTATTCAGCATACAAATAATTTTCATTATTAAG  387

seq1  AGAAATCCTTTATGACATTGCTGCTATTTGTATAGTTTAAAAGCTAGTAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCCTTTATGACATTGCTGCTATTTGTATAGTTTAAAAGCTAGTAA  437

seq1  CAGATAATGAATGTTTAGTCAGGTACTAGTCTTAGTTGGAAAGACATGCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAATGAATGTTTAGTCAGGTACTAGTCTTAGTTGGAAAGACATGCA  487

seq1  AACATTTCTGCTGCAATTCTTTCTGACATGAACTTTATGCATGCCTGTAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTCTGCTGCAATTCTTTCTGACATGAACTTTATGCATGCCTGTAT  537

seq1  TACATGAACTATTGTCTTTAACTTGCTATGAACTTATAACATGTGAAGAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAACTATTGTCTTTAACTTGCTATGAACTTATAACATGTGAAGAT  587

seq1  GCTTGGAAAATCATGTGATCAGTTATCCTGAGAGACTATAAGACATAAGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAAAATCATGTGATCAGTTATCCTGAGAGACTATAAGACATAAGA  637

seq1  GCCAAAAGTAAATGATGGTGTGGCTTTCTTCAAAAAAAAAAAAAAAACCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAAGTAAATGATGGTGTGGCTTTCTTCAAAAAAAAAAAAAAAACCA  687

seq1  ACAAAACAAAACAAAACAAAAAAAACCAAACGATACTTAAGGCCAATACA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAAAACAAAAAAAACCAAACGATACTTAAGGCCAATACA  737

seq1  ATAATCTATGCACTCCCAAATTTTAACATACACACTGATGAGAATGAGTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTATGCACTCCCAAATTTTAACATACACACTGATGAGAATGAGTG  787

seq1  AGCTCCTTTTTGTTATTTTCATGACCTTCTATGCTGTGGTGATTTCTGCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTTTTTGTTATTTTCATGACCTTCTATGCTGTGGTGATTTCTGCA  837

seq1  TACTCATTAAACCATAACTTAGGTGTGCTTCATCTTCAAAGCCTTCTCAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATTAAACCATAACTTAGGTGTGCTTCATCTTCAAAGCCTTCTCAT  887

seq1  TGCCTGCTGGCACAAAGGGATCATTCAATGTTTTTGCTATTTAACGAATC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCTGGCACAAAGGGATCATTCAATGTTTTTGCTATTTAACGAATC  937

seq1  CCATCATCCATGCATTTATCTTACATAGAGCTTTTTTGGGTCTATCTTGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATCCATGCATTTATCTTACATAGAGCTTTTTTGGGTCTATCTTGT  987

seq1  GCTAGTCAAGGTCAGGGACTGGAATAAAACAGATGAATTC  1037
      ||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTCAAGGTCAGGGACTGGAATAAAACAGATGAATTC  1027