BAC Information

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BAC

Clone NameB6Ng01-011L24
Chromosome10 (Build37)
Map Location 74,585,391 - 74,586,505
singlet/doubletsinglet
Overlap geneBcr
Upstream genePcdh15, EG630453, EG623346, Gnaz, LOC100040057, Rab36
Downstream geneSpecc1l, LOC100040670, Adora2a, EG544707, Upb1, 1110038D17Rik, Snrpd3, AI646023, Ggt1, Ggtla1, Susd2, Cabin1, Ddt, Gstt3, Gstt1, Gstt4, Gstt2, Mif, Derl3, Smarcb1, Mmp11, Ndg2, Gm867, Vpreb3, EG333669, Suhw2, Slc5a4b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011L24.bB6Ng01-011L24.g
ACCDH847044DH847045
length1,109233
definitionDH847044|Mus musculus domesticus DNA, BAC clone: B6Ng01-011L24, 5' end.DH847045|Mus musculus domesticus DNA, BAC clone: B6Ng01-011L24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagttcaaggatgtttttgtatggtccccatacaactacctat
ggggatatgatgggcaaaaagaccagaatcctctgaactaattgttggcg
aacccaggaaaagctcatcaggaccctggcctgttgccccgggctatgat
ctgtagtaccctcttgccaagcccttccagtagacactctgaagcaaaag
gcaacttaccctttgcatcaacaactttatgcagacatctaggacacgtg
gtgggttagcatgacaaccccagacagtgctagataccagaccagacatc
caagctggaaagcctttgatggtgtcagcgtatgggttgcacacaccttt
acccccagcatttgcaaggcagaggcaagtgggccagcctgttctacaaa
gaagttccagggcagtcagggctacaaaacagaccttattacaaaattta
agcaggggctgggcctggctgcacttcaaagctgctcgggtgatgctgag
agtgaggaacacctgtgagaggcagaggattctgtgacatcagctctgca
tggatgcctacagcttgcaatagtgcctagcctgagacctagcatgccag
cccaggtacaagaactagcaactcggaaccaaatctcaccacagttaatt
gccacttcaggatctatgatcctagactatagtctggagccttcccccag
aaccctgcgtaccaagagctgactctaccttgggagaggggctgtcaatc
aggaacatgaggctggccatctacaggagccttcctttattttggagcag
tacctggcacggtacaggtggcaggcattaccaggagctcaatttcctaa
caagagcctcagctcttgcaagaagcagggtgaaaaataccgtttgctag
gtacttcccccagctcttcatggtgttgtaatctttacacattctatgga
tgcacgccgacacttttggtgacatggacttccagtctgccattttagca
gatagaaacagattctgaagcttgactacattcaagtccacctatgacca
ttacatctagacctttaagatggagatagatgcttcacccatgagtggta
cattctgac
ctgccattcaattttgccagtgaagactcgggagccagatgctgggatga
aagcctgctagctcagagaggcagagaaagcacccagctgaccttcctac
tccactggcatcccagaaaaagaaaagctcctcttctcctcctcctcctc
ctcccccaccacctcctccatctccacctcccccaattcgttgttttttc
ttttttttgttttttcgtatttttgtaatcgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_74585391_74586505
seq2: B6Ng01-011L24.b_48_1156 (reverse)

seq1  GTCAG-ATGTCACCACTCATGGGTGAAGCATCTATCTCCATCTTAAAGTT  49
      ||||| |||| ||||||||||||||||||||||||||||||||||||| |
seq2  GTCAGAATGT-ACCACTCATGGGTGAAGCATCTATCTCCATCTTAAAGGT  49

seq1  CTTAGATTGTAATGGTCATAGGTGGACTTGAATGTAGTCAAGCTTCAGAA  99
      | |||| |||||||||||||||||||||||||||||||||||||||||||
seq2  C-TAGA-TGTAATGGTCATAGGTGGACTTGAATGTAGTCAAGCTTCAGAA  97

seq1  TTCTGTTTCCTATCTGCTAAAAATGGCAGACTGGAAGTCCATGTCCACCA  149
       ||||||| ||||||||| ||||||||||||||||||||||||||  | |
seq2  -TCTGTTT-CTATCTGCT-AAAATGGCAGACTGGAAGTCCATGTCACCAA  144

seq1  AAGTGTCGGCGTGCATCCATAGAATGTGTAAAAGATTACAACACCATGAA  199
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAGTGTCGGCGTGCATCCATAGAATGTGT-AAAGATTACAACACCATGAA  193

seq1  GAGCTGGGGGAAGTACCTAGCAAACGGTATTTTTCACCCTGCTTCTTGCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGGGGAAGTACCTAGCAAACGGTATTTTTCACCCTGCTTCTTGCA  243

seq1  AGAGCTGAGGCTCTTGTTAGGAAATTGAGCTCCTGGTAATGCCTGCCACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGAGGCTCTTGTTAGGAAATTGAGCTCCTGGTAATGCCTGCCACC  293

seq1  TGTACCGTGCCAGGTACTGCTCCAAAATAAAGGAAGGCTCCTGTAGATGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCGTGCCAGGTACTGCTCCAAAATAAAGGAAGGCTCCTGTAGATGG  343

seq1  CCAGCCTCATGTTCCTGATTGACAGCCCCTCTCCCAAGGTAGAGTCAGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTCATGTTCCTGATTGACAGCCCCTCTCCCAAGGTAGAGTCAGCT  393

seq1  CTTGGTACGCAGGGTTCTGGGGGAAGGCTCCAGACTATAGTCTAGGATCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTACGCAGGGTTCTGGGGGAAGGCTCCAGACTATAGTCTAGGATCA  443

seq1  TAGATCCTGAAGTGGCAATTAACTGTGGTGAGATTTGGTTCCGAGTTGCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCCTGAAGTGGCAATTAACTGTGGTGAGATTTGGTTCCGAGTTGCT  493

seq1  AGTTCTTGTACCTGGGCTGGCATGCTAGGTCTCAGGCTAGGCACTATTGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTGTACCTGGGCTGGCATGCTAGGTCTCAGGCTAGGCACTATTGC  543

seq1  AAGCTGTAGGCATCCATGCAGAGCTGATGTCACAGAATCCTCTGCCTCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTAGGCATCCATGCAGAGCTGATGTCACAGAATCCTCTGCCTCTC  593

seq1  ACAGGTGTTCCTCACTCTCAGCATCACCCGAGCAGCTTTGAAGTGCAGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTGTTCCTCACTCTCAGCATCACCCGAGCAGCTTTGAAGTGCAGCC  643

seq1  AGGCCCAGCCCCTGCTTAAATTTTGTAATAAGGTCTGTTTTGTAGCCCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCAGCCCCTGCTTAAATTTTGTAATAAGGTCTGTTTTGTAGCCCTG  693

seq1  ACTGCCCTGGAACTTCTTTGTAGAACAGGCTGGCCCACTTGCCTCTGCCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCTGGAACTTCTTTGTAGAACAGGCTGGCCCACTTGCCTCTGCCT  743

seq1  TGCAAATGCTGGGGGTAAAGGTGTGTGCAACCCATACGCTGACACCATCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATGCTGGGGGTAAAGGTGTGTGCAACCCATACGCTGACACCATCA  793

seq1  AAGGCTTTCCAGCTTGGATGTCTGGTCTGGTATCTAGCACTGTCTGGGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTTCCAGCTTGGATGTCTGGTCTGGTATCTAGCACTGTCTGGGGT  843

seq1  TGTCATGCTAACCCACCACGTGTCCTAGATGTCTGCATAAAGTTGTTGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGCTAACCCACCACGTGTCCTAGATGTCTGCATAAAGTTGTTGAT  893

seq1  GCAAAGGGTAAGTTGCCTTTTGCTTCAGAGTGTCTACTGGAAGGGCTTGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGGTAAGTTGCCTTTTGCTTCAGAGTGTCTACTGGAAGGGCTTGG  943

seq1  CAAGAGGGTACTACAGATCATAGCCCGGGGCAACAGGCCAGGGTCCTGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGGTACTACAGATCATAGCCCGGGGCAACAGGCCAGGGTCCTGAT  993

seq1  GAGCTTTTCCTGGGTTCGCCAACAATTAGTTCAGAGGATTCTGGTCTTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTTTCCTGGGTTCGCCAACAATTAGTTCAGAGGATTCTGGTCTTTT  1043

seq1  TGCCCATCATATCCCCATAGGTAGTTGTATGGGGACCATACAAAAACATC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATCATATCCCCATAGGTAGTTGTATGGGGACCATACAAAAACATC  1093

seq1  CTTGAACTTTGAATTC  1115
      ||||||||||||||||
seq2  CTTGAACTTTGAATTC  1109