BAC Information

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BAC

Clone NameB6Ng01-011N18
Chromosome10 (Build37)
Map Location 23,972,195 - 24,163,380
singlet/doubletdoublet
Overlap geneMoxd1
Upstream geneEya4, Rps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7
Downstream geneLOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800, Epb4.1l2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011N18.bB6Ng01-011N18.g
ACCDH847125DH847126
length374912
definitionDH847125|Mus musculus domesticus DNA, BAC clone: B6Ng01-011N18, 5' end.DH847126|Mus musculus domesticus DNA, BAC clone: B6Ng01-011N18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,972,195 - 23,972,574)(24,162,473 - 24,163,380)
sequence
tttaagtgtaagttaatggcaagggaagaggtgttatgagacataacata
cccatgtatgattattggaaaggaacgtgagagttatctgggcctaccac
catgacgatcccggagaatctggtcccaagtaccatgacttaacccccgg
gcacaaggagtctacggttactgaatcctgagaaagccaatgtggtgtct
acagtcttaccgtactttgatctggtaaatcaaaacgtaagttccctctt
cctttctttctttctttctttctttctttctttctttctttctttctttc
ttccttccttccttccttccttccttccttccttccttccttcctctcac
cctttctttctttttcttactctc
gaattcatgagattcttaggcaaatggatggaactagaaaatatcatccg
gagtgaggtaacccaataacaaaagaacacacatggtatgcactcactga
gaagtggatattagttccaataattatagaaaattagcatcccagctgca
gtgcatgctggttggggtcccactccctccctcagcaagccaaggagttc
cccctagacttttagggaccacagctcaggacaaactgggatccatggct
ttgatgagcagaataatttcaggagtggccacatctatggtttactaaag
gaatcctaacataggcttaagcacagagttaagagaggaaaagatcagaa
gagacttaaatataccctagggctcaggtgcaggcttctcaggagtcaag
ttactgtgtttggacaatagtcatatgtaaaattttggtagaatgttact
gagtggttctggagaggcatcgaagacagtttacaaatacgaagacaaaa
gtctcgcccatgggatactggaaaggaggatgttcttaattaacaaaagc
taacagcttgtctgagattctcaagaaatgtctaggggaaggaatgaggt
ctgagccatggtcatatacagccagctcttatacccatataacataagtc
gtctgtctatgaacagaatatcaactttatttctgtatcctttaaagcta
atgctgatgtgtccgcattgttgattgttagctgttgatggctctgatga
gggttctgtgaggagagccttcttctcctctcatgctcctcacatttctc
ttattctgggagttcagaaaagaatttaaaatttgaatagctataagctg
ccaatgtgttggtctgcaggcaaagtacctttttaattggaaaagtcagt
cgtttagatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_23972195_23972574
seq2: B6Ng01-011N18.b_48_427

seq1  GAATTCTTTAAGTGTAAGTTAATGGCAAGGAAAGTGCTGTTATGAGACAT  50
      |||||||||||||||||||||||||||||| ||| | |||||||||||||
seq2  GAATTCTTTAAGTGTAAGTTAATGGCAAGGGAAGAGGTGTTATGAGACAT  50

seq1  AACATACCCATGTATGATTACTAGGATAGCACCGTGAGAGTTATCTGGGC  100
      |||||||||||||||||||| | ||| || | ||||||||||||||||||
seq2  AACATACCCATGTATGATTA-TTGGAAAGGAACGTGAGAGTTATCTGGGC  99

seq1  CTACCACCATGACGATCCCGGAGAATCTGGTCCCAAGTACCATGACTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACCATGACGATCCCGGAGAATCTGGTCCCAAGTACCATGACTTAA  149

seq1  -ATAGGGGCACAAGGAGTCTACGGTTACTGAATCCTGAGAAAGCCAATGT  199
           |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCGGGCACAAGGAGTCTACGGTTACTGAATCCTGAGAAAGCCAATGT  199

seq1  GGTGTCTACAGTCTTACCGTACTTTGATCTGGTAAATCAAAACGTAAGTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTACAGTCTTACCGTACTTTGATCTGGTAAATCAAAACGTAAGTT  249

seq1  CCCTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  299

seq1  TTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC  349

seq1  CTCTCTCCCTTTCTTTCTTTTTCTTTCTCTC  380
      ||||| ||||||||||||||||||| |||||
seq2  CTCTCACCCTTTCTTTCTTTTTCTTACTCTC  380

seq1: chr10_24162473_24163380
seq2: B6Ng01-011N18.g_70_981 (reverse)

seq1  AGGATCTAAACGACTGACTTCTCCAA-TAAAAAGGTACTCTGCCTGCAGA  49
      |||||||||||||||||||| ||||| |||||||||||| ||||||||||
seq2  AGGATCTAAACGACTGACTTTTCCAATTAAAAAGGTACTTTGCCTGCAGA  50

seq1  CCAACACATTGGCAGCTTATAGCTATTCAAATTTT-AATTCTTTTCTGAA  98
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCAACACATTGGCAGCTTATAGCTATTCAAATTTTAAATTCTTTTCTGAA  100

seq1  CT-CCAGAATAAGGGAAATGTGAGGAGCATGAGAGGGGAAGGAGGCTCTC  147
      || |||||||||| |||||||||||||||||||||| |||| ||||||||
seq2  CTCCCAGAATAAGAGAAATGTGAGGAGCATGAGAGGAGAAGAAGGCTCTC  150

seq1  CTCACAG-AGCCTCATCAGAGCCATCAACAGCTAACAATCAACAATGCGG  196
      ||||||| | ||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGAACCCTCATCAGAGCCATCAACAGCTAACAATCAACAATGCGG  200

seq1  ACACATCAGCATTAGCTTTAAAGGATACAGAAATAAAGTTGATATTCTGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCAGCATTAGCTTTAAAGGATACAGAAATAAAGTTGATATTCTGT  250

seq1  TCATAGACAGACGACTTATGTTATATGGGTATAAGAGCTGGCTGTATATG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGACAGACGACTTATGTTATATGGGTATAAGAGCTGGCTGTATATG  300

seq1  ACCATGGCTCAGACCTCATTCCTTCCCCTAGACATTTCTTGAGAATCTCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGCTCAGACCTCATTCCTTCCCCTAGACATTTCTTGAGAATCTCA  350

seq1  GACAAGCTGTTAGCTTTTGTTAATTAAGAACATCCTCCTTTCCAGTATCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGCTGTTAGCTTTTGTTAATTAAGAACATCCTCCTTTCCAGTATCC  400

seq1  CATGGGCGAGACTTTTGTCTTCGTATTTGTAAACTGTCTTCGATGCCTCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGCGAGACTTTTGTCTTCGTATTTGTAAACTGTCTTCGATGCCTCT  450

seq1  CCAGAACCACTCAGTAACATTCTACCAAAATTTTACATATGACTATTGTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACCACTCAGTAACATTCTACCAAAATTTTACATATGACTATTGTC  500

seq1  CAAACACAGTAACTTGACTCCTGAGAAGCCTGCACCTGAGCCCTAGGGTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACAGTAACTTGACTCCTGAGAAGCCTGCACCTGAGCCCTAGGGTA  550

seq1  TATTTAAGTCTCTTCTGATCTTTTCCTCTCTTAACTCTGTGCTTAAGCCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAGTCTCTTCTGATCTTTTCCTCTCTTAACTCTGTGCTTAAGCCT  600

seq1  ATGTTAGGATTCCTTTAGTAAACCATAGATGTGGCCACTCCTGAAATTAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAGGATTCCTTTAGTAAACCATAGATGTGGCCACTCCTGAAATTAT  650

seq1  TCTGCTCATCAAAGCCATGGATCCCAGTTTGTCCTGAGCTGTGGTCCCTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCATCAAAGCCATGGATCCCAGTTTGTCCTGAGCTGTGGTCCCTA  700

seq1  AAAGTCTAGGGGGAACTCCTTGGCTTGCTGAGGGAGGGAGTGGGACCCCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTAGGGGGAACTCCTTGGCTTGCTGAGGGAGGGAGTGGGACCCCA  750

seq1  ACCAGCATGCACTGCAGCTGGGATGCTAATTTTCTATAATTATTGGAACT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCATGCACTGCAGCTGGGATGCTAATTTTCTATAATTATTGGAACT  800

seq1  AATATCCACTTCTCAGTGAGTGCATACCATGTGTGTTCTTTTGTTATTGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCACTTCTCAGTGAGTGCATACCATGTGTGTTCTTTTGTTATTGG  850

seq1  GTTACCTCACTCCGGATGATATTTTCTAGTTCCATCCATTTGCCTAAGAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCTCACTCCGGATGATATTTTCTAGTTCCATCCATTTGCCTAAGAA  900

seq1  TCTCATGAATTC  908
      ||||||||||||
seq2  TCTCATGAATTC  912