BAC Information

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BAC

Clone NameB6Ng01-013E07
Chromosome10 (Build37)
Map Location 104,053,541 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013E07.bB6Ng01-013E07.g
ACCDH848131DH848132
length971905
definitionDH848131|Mus musculus domesticus DNA, BAC clone: B6Ng01-013E07, 5' end.DH848132|Mus musculus domesticus DNA, BAC clone: B6Ng01-013E07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcacggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggt
gtatatccagaagatgccccaacggataagaaggacacatgctccactat
gttcatagcagccttatttaaaatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcgcacaatatgtcctcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaacttgctaaacgcatgaaattcaa
gaagaaggaagaccaaagtgtcgacactttaccccttcctagaaatggga
acaaaactcccatggacggagttacagagacaaaatttggagctgtgacg
aaaggatggaccatctagtgattgccatatgcagggatccatcccataat
cagcttcctttcccctatcaggcagggaaagggcagactcctttcccgcc
tgataaccaaccagcaagaaaagttaatgtcaggaagaatacctgtggag
agattggaaagaaagaggagaaaaagataaggttaaggagctagctctta
gtactctgaatcagatgagga

gaattcttggggttaattaagtacactctcatatcatctgcaaatagtga
tagtttgacttcttcctttacaatttgcatcactttgacctccttttgtt
gtctaattgacctggcaaggacttcaagtactatattgaataggtaagga
gagagaggggacccttgtctcatctctgatttcagtaggtttgcctgaag
tctctctccatttagtttaatgttgtctactgttttgctgtatattgctt
ttactatgtttagatacgggccttgaattcctgatctttctaagactttt
atcatgaaggggtgttggactttggaaatcctttcttggcatctaatgaa
atgatcatgtgtatttttttcctttgagtttgtttatatagtggattaca
ttgatgggtttccataaatgaaccatccctgcatccctgtgatgaagtct
acttgatcctgatgtttgatgattttgaattgtttttggattagtttttc
gagaattttattgggtagtttttgtatcgatattcctaaggaacattggc
ctgaatttctctttctttgttggttctttgtgtggtttaaatatgaaaat
aattgtggctctatggaacaaattgggtagtgttccttctgtttctattt
ttaggactactttaaggagtattggtattaggtcttctttgaaggtctga
tagactctgcaccaaatccatctcatcctgggcttttttaaggtggaaga
catttagtggctgcttctatttctttagggaattgaactggataagatcc
tgattttactttggtacttggtatctgtctagaaaattgtccatttcatc
cagatttgccagttttgttgaatattgggtttttatttttttaaagtaga
caata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053541_104054363
seq2: B6Ng01-013E07.b_47_657 (reverse)

seq1  GGGTATCCTAAGTTTCTGGGCTAATATCCACTTATCAGTGAGTACATATT  50
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGGTATCCTAAGTTTCTGGGCTAATATCCACTTATCAGTGAGGACATATT  50

seq1  GCGCGAGTTCCTTTGTGATTGGGTTACCGCACTCAGGATGATACTCTCCA  100
      | |||||||||||||||| || |||||| ||||||||||||| | |||||
seq2  GTGCGAGTTCCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCCA  100

seq1  GGTCCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTTAATAGCT  150
      |||||||||||||| |||||||||||||||||||||||||||||||||| 
seq2  GGTCCATCCATTTGGCTAGGAATTTCATAAATTCATTCTTTTTAATAGC-  149

seq1  CCATTTACATTTAATTTAATTAATGTAATTACAATTAATTAATTTATTAA  200
                                                        
seq2  --------------------------------------------------  149

seq1  TTAAATAATTTAATAATTTAATTGATAAATTAATTTAATTAATTAATTTA  250
                                                        
seq2  --------------------------------------------------  149

seq1  ATTAATTAAATTAAATAATAATTTAATAATAAATTAAATATTTTAAAATT  300
                                                        
seq2  --------------------------------------------------  149

seq1  AATAATAATTTTATAAGTAAATAATTTAATTAATGTAATTTAATTAATGT  350
                   | ||||                             ||
seq2  -------------TGAGTA-----------------------------GT  157

seq1  AATTACATTACATTTAATAGCTCCATTGTGTAAATGTACCACATTTTCTG  400
      |                   |||||||||||| |||||||||||||||||
seq2  A-------------------CTCCATTGTGTAGATGTACCACATTTTCTG  188

seq1  TATCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTA  450
      |||| ||||||||||||||||||||||||||||||||||||| |||||||
seq2  TATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTA  238

seq1  TTATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCG  500
      || ||||||||||||||||||| |||||||||||||||||||||||| | 
seq2  TTTTAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTATCC  288

seq1  GTTGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTC  550
      ||||||||||||||||||||||  ||||| ||||||||||||||||||||
seq2  GTTGGGGCATCTTCTGGATATACACCCAGGAGAGGTATTGCTGGATCCTC  338

seq1  CGGTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGA  600
      |||||||||||||||||||||||||| |||||||||||| ||||||||||
seq2  CGGTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGA  388

seq1  GTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTT  438

seq1  TCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGC  700
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACATCCACGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGC  488

seq1  CATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTT  538

seq1  CCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATT  800
      || |||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCGTGATGATTAAGGATGTTGAACATTTTTTCAGGTGTTTCTCTGCCATT  588

seq1  CGGTATTCCTCAGGTGAGAATTC  823
      |||||||||||||||||||||||
seq2  CGGTATTCCTCAGGTGAGAATTC  611


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