BAC Information

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BAC

Clone NameB6Ng01-013H02
Chromosome10 (Build37)
Map Location 55,701,216 - 55,701,868
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382460, LOC100041927
Downstream geneD630037F22Rik, 1700060H10Rik, EG629732, Gja1, EG668347, LOC100042622, LOC668355, LOC100042628, EG629739
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013H02.bB6Ng01-013H02.g
ACCDH848255DH848256
length6541,051
definitionDH848255|Mus musculus domesticus DNA, BAC clone: B6Ng01-013H02, 5' end.DH848256|Mus musculus domesticus DNA, BAC clone: B6Ng01-013H02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatcaaatactgtaaatccaatccaaaaaaataaaaatggtaa
gagaattcatagggtttagaagaggtgacactgctatgttatttttgttt
gtttgggattttttgttgttgttctttcttttttaaatggctgtgattgt
atatgagaaactcccttttagataaccatatttatttcaatagagtaata
ccactattaggtttgatcagagaagcttcttttgacagtggttagcattc
cctacagagactcataattggttaaacactgaggataagactgtgataag
ccaaaagtgggacatacatattatctgccccaaggctcaagaagcactgt
gaaagagggggggggaacgtaaggggctgaggaagtggcatgacatgcct
cttgtacttttggcttgaccctagatagtacgttgtcattgtcagctagt
cctaagagccaccttgttcagtacaaatattttcccccacagtgaggtga
cttctaggaacgtacccatggtcctgtaaacaaatctcagtcacattccc
acacattcttgttatagctctagtgaaattcactgaattttcaatctctc
cccctcccttctcctttctctctctctctctctctctctctctctctctc
tctc
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgttaaacatatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaacacccatggaaggagtacagagccaaagtttggagctgagatgaaa
ggatggaccatgtagagactgccatatccagggatccaccccataatcag
catccaaacgcttacaccattgcatacactagcagatttattggaaagga
cccagaatgtagctgtctcttggtgagactatgccgtggcctaagcaaac
acagaagtgtatgctcacagtcagctaatgggatggatcatagggctcca
ttggtaggagctagaaaagtacccaatgtacataggaatctgcaaccctt
aggtggaacaatttatgaacctaaccaagtccccggaagcttggcttcta
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_55701216_55701868
seq2: B6Ng01-013H02.b_46_699

seq1  GAATTCACATCAAATACTGTAAATCCAATCCAAAAAAATAAAAATGGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATCAAATACTGTAAATCCAATCCAAAAAAATAAAAATGGTAA  50

seq1  GAGAATTCATAGGGTTTAGAAGAGGTGACACTGCTATGTTATTTTTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTCATAGGGTTTAGAAGAGGTGACACTGCTATGTTATTTTTGTTT  100

seq1  GTTTGGGATTTTTTGTTGTTGTTCTTTCTTTTTTAAATGGCTGTGATTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGATTTTTTGTTGTTGTTCTTTCTTTTTTAAATGGCTGTGATTGT  150

seq1  ATATGAGAAACTCCCTTTTAGATAACCATATTTATTTCAATAGAGTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGAAACTCCCTTTTAGATAACCATATTTATTTCAATAGAGTAATA  200

seq1  CCACTATTAGGTTTGATCAGAGAAGCTTCTTTTGACAGTGGTTAGCATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATTAGGTTTGATCAGAGAAGCTTCTTTTGACAGTGGTTAGCATTC  250

seq1  CCTACAGAGACTCATAATTGGTTAAACACTGAGGATAAGACTGTGATAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGAGACTCATAATTGGTTAAACACTGAGGATAAGACTGTGATAAG  300

seq1  CCAAAAGTGGGACATACATATTATCTGCCCCAAGGCTCAAGAAGCACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGTGGGACATACATATTATCTGCCCCAAGGCTCAAGAAGCACTGT  350

seq1  GAAAGAGGGGGGGGGAACGTAAGGGGCTGAGGAAGTGGCATGACATGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGGGGGGGGGAACGTAAGGGGCTGAGGAAGTGGCATGACATGCCT  400

seq1  CTTGTACTTTTGGCTTGACCCTAGATAGTACGTTGTCATTGTCAGCTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTACTTTTGGCTTGACCCTAGATAGTACGTTGTCATTGTCAGCTAGT  450

seq1  CCTAAGAGCCACCTTGTTCAGTACAAATATTTTCCCCCACAGTGAGGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGAGCCACCTTGTTCAGTACAAATATTTTCCCCCACAGTGAGGTGA  500

seq1  CTTCTAGGAACGTACCCATGGTCCTGTAAACAAATCTCAGTCACATTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGGAACGTACCCATGGTCCTGTAAACAAATCTCAGTCACATTCCC  550

seq1  ACACATTCTTGTTATAGCTCTAGTGAAATTCACTGAA-TTTCAATCTCTC  599
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACACATTCTTGTTATAGCTCTAGTGAAATTCACTGAATTTTCAATCTCTC  600

seq1  CCTCTCCCTTCTCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  649
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCTTCTCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  650

seq1  TCTC  653
      ||||
seq2  TCTC  654