BAC Information

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BAC

Clone NameB6Ng01-013I02
Chromosome10 (Build37)
Map Location 70,092,890 - 70,222,069
singlet/doubletdoublet
Overlap genenone
Upstream geneAnk3, LOC100039734, 5730416O20Rik, Ccdc6, 2310015B20Rik, Slc16a9, LOC632955, 1200015N20Rik, LOC665398, Phyhipl, EG665429
Downstream geneBicc1, LOC622551, C730027H18Rik, Tfam, Ube2d1, LOC665472, Zcd1, Ipmk, LOC100039860, LOC216081, EG216082, LOC622812
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013I02.bB6Ng01-013I02.g
ACCDH848303DH848304
length1,078959
definitionDH848303|Mus musculus domesticus DNA, BAC clone: B6Ng01-013I02, 5' end.DH848304|Mus musculus domesticus DNA, BAC clone: B6Ng01-013I02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,220,987 - 70,222,069)(70,092,890 - 70,093,854)
sequence
gaattctgggaagctcctcctggcagtgccctgcagcaccgtgctacctg
aaagacgaccgtgctacctgatagttctgaagcatttttcagcacatttc
tcaggacagtctggggcttctggatgctggggaacagccaaccctgattt
tatagatgagagggcagaggcttggaagtcttcagaaatcatcagattat
atatgttccaaggctgatgtgaatattggtttatatgaggtctcttctta
gtaagaattttaagaggaaaactatacattaagagaacaacaaggggctg
gagagatggctcagtggttaaaagctctgactgctcttccagaggtcctg
agttcaattcccagcaaccacatggtgactcacaaccatctgtaatgggg
tccgatgtactcttctggtgtgtctgaagacagctacagtgtactcatat
aaataaaaataattttttaaaaaaaaagacaacaacagggtcctactatg
tgtggctcctttgtgacagcctaggcacatgtttatacaactgactcagg
gataggcttaaagatcgatccagccatctggtttacctttcatcagaaaa
caatgcagcttggtgtatttgctaaaggtgggttagagaagcaggacatg
gatgtgagggaggcttccctgactcaagagatctgagttttcatgttgac
agaaagagagtctggcttctggcctgagtcagagaaggaagaacttacag
gtctccacaagatacacagaaccagctattggactcaagcaaatgagtgc
tgaatgattattcttacataaagaatttgctgcttctttcagagctttat
attttctttgtgcaagttgattgctgttcataaaaaatgaattgttcgat
ttgtccttattttagcaatttccttttatggctttggttccccccccccc
ttcatttgcttttgttttggtttcatggtggagagtctcaggtgtaaatc
acaagaatgccggtttgtctccctaggctctgctctgctatatcattaat
atttccaaacatactcacaacttctttt
gaattcactttgactgtgagaagacttaagagaaagctatctagagaaag
ccacactagagagattagactgacggtgtctaaacccacggaagcatttc
aagcaacaagacacaacccaggtgttttgttccttcccggataggcagta
gtcaaaagtgtacagtattgcctgcaatacgttcatgctaacaaaatgaa
ctctgaacttaggaatgaatgaaataccaagaagagaaacatccctaaga
tacagtgagccacgttcagaagggaaaattccaatgtgctaatttcttta
gcaagcgaatggcaggtaattaagaagggaaaattatttctgttgctgaa
agaatctggtatgctttcaactcaatacaagggtaattttgtttaaataa
tgattaagaaatccacaggaaattagtgtggtccataagcaattcttttc
tgaaatgcttcatatcctgtcacagggcatgtctgagcaccaagaggcca
ctactctataggatgttctatgttatgttgatgcttggttgagatgttag
gttggtcagatctatggttctttcttcttaaagatgttcagacagcatgt
gcaaaaatggctggagttgacacaaaacaacagttattggtcaaaaattt
tatgatcacacaaaaattagttgtgaattgtgtcagaaaaatgtgtttta
acaagaggagggttttaatgcaatcagaatgaaaaaaaaaaaaccctcct
gtgttatttttttttaaaaaatcaatgaaaaataaaccaataggtttgct
ctaacaaagaaaagatgccagtttcaaatttactcagactatccatagga
aggagacaagtatggatagattttgttttttaaagtagccacctacattt
tacttccatgtggccttttaaggagatttagaaaacgcccatgaggtttt
ttttttcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_70220987_70222069
seq2: B6Ng01-013I02.b_44_1121 (reverse)

seq1  AAAAGAAGTGTGGAGT-TGTTTGGAAATTATTAATGATTATAAGCAGAGC  49
      |||||||||   |||| |||||||||| ||||||||| ||| ||||||||
seq2  AAAAGAAGTTGTGAGTATGTTTGGAAA-TATTAATGA-TAT-AGCAGAGC  47

seq1  AGAGCCTAGGAAGAACAAAACCGGCATCTTTGTGATTTACCACCTGAGAC  99
      |||||||||| |||   ||||||||||  |||||||||| ||||||||||
seq2  AGAGCCTAGGGAGA--CAAACCGGCATTCTTGTGATTTA-CACCTGAGAC  94

seq1  TCCTCCACCTGGAAAACAAAACAAAAGCAAATGAA-GGGGGGGGGGAACC  148
      | |||||||  |||| ||||||||||||||||||| ||||||||||||||
seq2  T-CTCCACCATGAAACCAAAACAAAAGCAAATGAAGGGGGGGGGGGAACC  143

seq1  AAAGACATAAAAAGGAATTGCT-AAATAAAGACAAATCGAACAATTCATT  197
      |||| ||||||| | ||||||| |||||| ||||||||||||||||||||
seq2  AAAGCCATAAAAGGAAATTGCTAAAATAAGGACAAATCGAACAATTCATT  193

seq1  TTTTATGAACAGCAATCAACTTGCACAAAGAAAATATAAAGCTCTGATAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTTATGAACAGCAATCAACTTGCACAAAGAAAATATAAAGCTCTGA-AA  242

seq1  GAAGCAGCAAATTCTTTATGTAAGAATTATCATTTCAGCACTCATTTGCT  297
      ||||||||||||||||||||||||||| |||| |||||||||||||||||
seq2  GAAGCAGCAAATTCTTTATGTAAGAATAATCA-TTCAGCACTCATTTGCT  291

seq1  TGAGTCCAATAGCTGGTTCTGTGTATCTTGTGGAGACCTGTAAGTTCTTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCAATAGCTGGTTCTGTGTATCTTGTGGAGACCTGTAAGTTCTTC  341

seq1  CTTCTCTGACTCAGGCCAGAAGCCAGACTCTCTTTCTGTCAACATGAAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTGACTCAGGCCAGAAGCCAGACTCTCTTTCTGTCAACATGAAAA  391

seq1  CTCAGATCTCTTGAGTCAGGGAAGCCTCCCTCACATCCATGTCCTGCTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGATCTCTTGAGTCAGGGAAGCCTCCCTCACATCCATGTCCTGCTTC  441

seq1  TCTAACCCACCTTTAGCAAATACACCAAGCTGCATTGTTTTCTGATG-AA  496
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCTAACCCACCTTTAGCAAATACACCAAGCTGCATTGTTTTCTGATGAAA  491

seq1  GGTAAACCAGATGGCTGGATCGATCTTTAAGCCTATCCCTGAGTCAGTTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAACCAGATGGCTGGATCGATCTTTAAGCCTATCCCTGAGTCAGTTG  541

seq1  TATAAACATGTGCCTAGGCTGTCACAAAGGAGCCACACATAGTAGGACCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACATGTGCCTAGGCTGTCACAAAGGAGCCACACATAGTAGGACCC  591

seq1  TGTTGTTGTCTTTTTTTTTAAAAAATTATTTTTATTTATATGAGTACACT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTCTTTTTTTTTAAAAAATTATTTTTATTTATATGAGTACACT  641

seq1  GTAGCTGTCTTCAGACACACCAGAAGAGTACATCGGACCCCATTACAGAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTGTCTTCAGACACACCAGAAGAGTACATCGGACCCCATTACAGAT  691

seq1  GGTTGTGAGTCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGAGTCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGA  741

seq1  AGAGCAGTCAGAGCTTTTAACCACTGAGCCATCTCTCCAGCCCCTTGTTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGTCAGAGCTTTTAACCACTGAGCCATCTCTCCAGCCCCTTGTTG  791

seq1  TTCTCTTAATGTATAGTTTTCCTCTTAAAATTCTTACTAAGAAGAGACCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTAATGTATAGTTTTCCTCTTAAAATTCTTACTAAGAAGAGACCT  841

seq1  CATATAAACCAATATTCACATCAGCCTTGGAACATATATAATCTGATGAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAACCAATATTCACATCAGCCTTGGAACATATATAATCTGATGAT  891

seq1  TTCTGAAGACTTCCAAGCCTCTGCCCTCTCATCTATAAAATCAGGGTTGG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGACTTCCAAGCCTCTGCCCTCTCATCTATAAAATCAGGGTTGG  941

seq1  CTGTTCCCCAGCATCCAGAAGCCCCAGACTGTCCTGAGAAATGTGCTGAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCCCAGCATCCAGAAGCCCCAGACTGTCCTGAGAAATGTGCTGAA  991

seq1  AAATGCTTCAGAACTATCAGGTAGCACGGTCGTCTTTCAGGTAGCACGGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTTCAGAACTATCAGGTAGCACGGTCGTCTTTCAGGTAGCACGGT  1041

seq1  GCTGCAGGGCACTGCCAGGAGGAGCTTCCCAGAATTC  1083
      |||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGGGCACTGCCAGGAGGAGCTTCCCAGAATTC  1078

seq1: chr10_70092890_70093854
seq2: B6Ng01-013I02.g_70_1028

seq1  GAATTCACTTTGACTGTGAGAAGACTTAAGAGAAAGCTATCTAGAGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGACTGTGAGAAGACTTAAGAGAAAGCTATCTAGAGAAAG  50

seq1  CCACACTAGAGAGATTAGACTGACGGTGTCTAAACCCACGGAAGCATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTAGAGAGATTAGACTGACGGTGTCTAAACCCACGGAAGCATTTC  100

seq1  AAGCAACAAGACACAACCCAGGTGTTTTGTTCCTTCCCGGATAGGCAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACAAGACACAACCCAGGTGTTTTGTTCCTTCCCGGATAGGCAGTA  150

seq1  GTCAAAAGTGTACAGTATTGCCTGCAATACGTTCATGCTAACAAAATGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAGTGTACAGTATTGCCTGCAATACGTTCATGCTAACAAAATGAA  200

seq1  CTCTGAACTTAGGAATGAATGAAATACCAAGAAGAGAAACATCCCTAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAACTTAGGAATGAATGAAATACCAAGAAGAGAAACATCCCTAAGA  250

seq1  TACAGTGAGCCACGTTCAGAAGGGAAAATTCCAATGTGCTAATTTCTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGAGCCACGTTCAGAAGGGAAAATTCCAATGTGCTAATTTCTTTA  300

seq1  GCAAGCGAATGGCAGGTAATTAAGAAGGGAAAATTATTTCTGTTGCTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCGAATGGCAGGTAATTAAGAAGGGAAAATTATTTCTGTTGCTGAA  350

seq1  AGAATCTGGTATGCTTTCAACTCAATACAAGGGTAATTTTGTTTAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTGGTATGCTTTCAACTCAATACAAGGGTAATTTTGTTTAAATAA  400

seq1  TGATTAAGAAATCCACAGGAAATTAGTGTGGTCCATAAGCAATTCTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAGAAATCCACAGGAAATTAGTGTGGTCCATAAGCAATTCTTTTC  450

seq1  TGAAATGCTTCATATCCTGTCACAGGGCATGTCTGAGCACCAAGAGGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGCTTCATATCCTGTCACAGGGCATGTCTGAGCACCAAGAGGCCA  500

seq1  CTACTCTATAGGATGTTCTATGTTATGTTGATGCTTGGTTGAGATGTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTATAGGATGTTCTATGTTATGTTGATGCTTGGTTGAGATGTTAG  550

seq1  GTTGGTCAGATCTATGGTTCTTTCTTCTTAAAGATGTTCAGACAGCATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTCAGATCTATGGTTCTTTCTTCTTAAAGATGTTCAGACAGCATGT  600

seq1  GCAAAAATGGCTGGAGTTGACACAAAACAACAGTTATTGGTCAAAAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAATGGCTGGAGTTGACACAAAACAACAGTTATTGGTCAAAAATTT  650

seq1  TATGATCACACAAAAATTAGTTGTGAATTGTGTCAGAAAAATGTGTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATCACACAAAAATTAGTTGTGAATTGTGTCAGAAAAATGTGTTTTA  700

seq1  ACAAGAGGAGGGTTTTTAATGCAATCAGAATGAAAAAAAAAAAAACCTCC  750
      |||||||||||| ||||||||||||||||||||||||||||||| |||||
seq2  ACAAGAGGAGGG-TTTTAATGCAATCAGAATGAAAAAAAAAAAACCCTCC  749

seq1  TGTGTTA-TTTTTTTTAAAAAATCAATGAAAAATAAACCACTAGG-TTGC  798
      ||||||| |||||||||||||||||||||||||||||||| |||| ||||
seq2  TGTGTTATTTTTTTTTAAAAAATCAATGAAAAATAAACCAATAGGTTTGC  799

seq1  TCTAACAAAG-AAAGATGCCAGTTTCAAATTTACTCAGACTATACAATAG  847
      |||||||||| |||||||||||||||||||||||||||||||| | ||||
seq2  TCTAACAAAGAAAAGATGCCAGTTTCAAATTTACTCAGACTAT-CCATAG  848

seq1  GAAGTAGACAAAGTATGG-TAGATTTTGTTTTTTAAAGATAGCCACACCT  896
      |||| |||| |||||||| ||||||||||||||||||| ||||  |||||
seq2  GAAGGAGAC-AAGTATGGATAGATTTTGTTTTTTAAAG-TAGC--CACCT  894

seq1  ACATTTTACTTTCCATGTGGCCTTTTAAAGGAGATTTTTGAAAACTGCCC  946
      ||||||||| |||||||||||||||| ||||||| ||| |||||| ||||
seq2  ACATTTTAC-TTCCATGTGGCCTTTT-AAGGAGA-TTTAGAAAAC-GCCC  940

seq1  AAGAAGTTTTTTTTTTCCT  965
      | || ||||||||||||||
seq2  ATGAGGTTTTTTTTTTCCT  959