BAC Information

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BAC

Clone NameB6Ng01-013N07
Chromosome10 (Build37)
Map Location 66,298,221 - 66,419,253
singlet/doubletdoublet
Overlap genenone
Upstream gene1700023F02Rik, 4930407I19Rik
Downstream geneReep3, Jmjd1c, Nrbf2, Egr2, Gm237, LOC100040081, LOC100039618, Zfp365
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013N07.bB6Ng01-013N07.g
ACCDH848545DH848546
length2001,016
definitionDH848545|Mus musculus domesticus DNA, BAC clone: B6Ng01-013N07, 5' end.DH848546|Mus musculus domesticus DNA, BAC clone: B6Ng01-013N07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,298,221 - 66,298,420)(66,418,230 - 66,419,253)
sequence
acattctttgacttcccactgacccaaaacaatgtgcaaaaggtttgtat
ggcaaaggccgccatctgcccctcttgcctttccctgtagtctcactctg
gtgtgtactgttcctgaaagagacctgggtcttcctgtcacattcttgag
atcatgaaccgtatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

gaattcatccgtgcatggtgagatcctgtcttagcaaattaaaaaaagaa
agaaagagagagagagagaaagaaagaaagaaagaaagaaagaaagaaag
aaagaaagaaagaaagaaagaaagaaagaaagaaagagagaaagaaagag
tctgcctgtttgttctgctaagtcactcaagtgtttataaatccacaatt
ttagatttctgacatgaagacgagtaagttgtattacaatatattttttt
ccctgtgtaaaagagagagaataatagctgaagacaacctggaacactta
atttatttggaaagatttttttttcagggctgaagctgtctctccattgg
cagagtgctttgcttagcatgctttaagtcgtcggtcctatttctattgc
agcataaagcaggatggatgcccttgctgctgatcccagcacttcagagg
gggacctgggaaggtcaggggctcaaggtcattcatcgcctgaaaccctt
ttcttgaagcctcaccacgagtgcacaatcacctcagaagctattgtgca
cacgagttagctaggaaagaagagctggggagcagatttgcctaaggaga
tgaacttgcacagccaatcctttttttgggagcgtgcttcctgcatcctt
ggctcccaaggcactgaggaaaatcagaggggagactgcaatgcatcccc
cacgggaatgaatgtgtgagtgagtggaaaacggaagacagctgtaatga
caataaagatgaccgaagggctattgccacaaaaatcaccctggaccttc
ttgataaattgtcgacagccactaacctcatcacctgagtgagacagatt
agccaaaggagactgaaactgtcaccctggtcctcctgtcaccttgacac
tcatttcagcccagacttccacgtagagatcaagttgttagttgacattt
ccccccttgagatagggttctctaatgtagcctgaagctgctgtgggtgt
gtgtgtggtgtagtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_66298221_66298420
seq2: B6Ng01-013N07.b_52_251

seq1  ACATTCTTTGACTTCCCACTGACCCAAAACAATGTGCAAAAGGTTTGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTTTGACTTCCCACTGACCCAAAACAATGTGCAAAAGGTTTGTAT  50

seq1  GGCAAAGGCCGCCATCTGCCCCTCTTGCCTTTCCCTGTAGTCTCACTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGGCCGCCATCTGCCCCTCTTGCCTTTCCCTGTAGTCTCACTCTG  100

seq1  GTGTGTACTGTTCCTGAAAGAGACCTGGGTCTTCCTGTCACATTCTTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTACTGTTCCTGAAAGAGACCTGGGTCTTCCTGTCACATTCTTGAG  150

seq1  ATCATGAACCGTATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAACCGTATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  200

seq1: chr10_66418230_66419253
seq2: B6Ng01-013N07.g_67_1082 (reverse)

seq1  ACACTAAACACACACACACACACCACAGCAGCTTCAGGCTACA-TAGAGA  49
      |||||| || ||||||||||| ||||||||||||||||||||| ||||| 
seq2  ACACTACAC-CACACACACAC-CCACAGCAGCTTCAGGCTACATTAGAG-  47

seq1  AACCCTATCTCAGGGGGGGAAATGTCAACCAACAACCTGAGTCTCTACGT  99
      |||||||||||| |||||||||||||||| |||||| ||| |||||||||
seq2  AACCCTATCTCAAGGGGGGAAATGTCAACTAACAACTTGA-TCTCTACGT  96

seq1  GGAAAGTCTGGGCTGAAATGAGTGTCAAGGTGACAGGAGGGACCAGGGTG  149
      || ||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GG-AAGTCTGGGCTGAAATGAGTGTCAAGGTGACAGGA-GGACCAGGGTG  144

seq1  ACAGTTTCAGTTCTCCTTTTGGCTAATCTGTCTCACTCAGGTGATGAGGT  199
      |||||||||| ||||| |||||||||||||||||||||||||||||||||
seq2  ACAGTTTCAG-TCTCC-TTTGGCTAATCTGTCTCACTCAGGTGATGAGGT  192

seq1  TAGTGGCTGTCGACAATTTATCAAGAAGGTCCAGGGTGATTTTTTGTGGC  249
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAGTGGCTGTCGACAATTTATCAAGAAGGTCCAGGGTGA-TTTTTGTGGC  241

seq1  AATAGCCCTTCGGTCATCTTTATTGTCATTACAGCTGTCTTCCGTTTTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCCCTTCGGTCATCTTTATTGTCATTACAGCTGTCTTCCGTTTTCC  291

seq1  ACTCACTCACACATTCATTCCCGTGGGGGATGCATTGCAGTCTCCCCTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTCACACATTCATTCCCGTGGGGGATGCATTGCAGTCTCCCCTCT  341

seq1  GATTTTCCTCAGTGCCTTGGGAGCCAAGGATGCAGGAAGCACGCTCCCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCCTCAGTGCCTTGGGAGCCAAGGATGCAGGAAGCACGCTCCCAA  391

seq1  AAAAAGGATTGGCTGTGCAAGTTCATCTCCTTAGGCAAATCTGCTCCCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGATTGGCTGTGCAAGTTCATCTCCTTAGGCAAATCTGCTCCCCA  441

seq1  GCTCTTCTTTCCTAGCTAACTCGTGTGCACAATAGCTTCTGAGGTGATTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCTTTCCTAGCTAACTCGTGTGCACAATAGCTTCTGAGGTGATTG  491

seq1  TGCACTCGTGGTGAGGCTTCAAGAAAAGGGTTTCAGGCGATGAATGACCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTCGTGGTGAGGCTTCAAGAAAAGGGTTTCAGGCGATGAATGACCT  541

seq1  TGAGCCCCTGACCTTCCCAGGTCCCCCTCTGAAGTGCTGGGATCAGCAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCCCTGACCTTCCCAGGTCCCCCTCTGAAGTGCTGGGATCAGCAGC  591

seq1  AAGGGCATCCATCCTGCTTTATGCTGCAATAGAAATAGGACCGACGACTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCATCCATCCTGCTTTATGCTGCAATAGAAATAGGACCGACGACTT  641

seq1  AAAGCATGCTAAGCAAAGCACTCTGCCAATGGAGAGACAGCTTCAGCCCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATGCTAAGCAAAGCACTCTGCCAATGGAGAGACAGCTTCAGCCCT  691

seq1  GAAAAAAAAATCTTTCCAAATAAATTAAGTGTTCCAGGTTGTCTTCAGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAATCTTTCCAAATAAATTAAGTGTTCCAGGTTGTCTTCAGCT  741

seq1  ATTATTCTCTCTCTTTTACACAGGGAAAAAAATATATTGTAATACAACTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTCTCTCTTTTACACAGGGAAAAAAATATATTGTAATACAACTT  791

seq1  ACTCGTCTTCATGTCAGAAATCTAAAATTGTGGATTTATAAACACTTGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGTCTTCATGTCAGAAATCTAAAATTGTGGATTTATAAACACTTGAG  841

seq1  TGACTTAGCAGAACAAACAGGCAGACTCTTTCTTTCTCTCTTTCTTTCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAGCAGAACAAACAGGCAGACTCTTTCTTTCTCTCTTTCTTTCTT  891

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  941

seq1  TTTCTTTCTCTCTCTCTCTCTTTCTTTCTTTTTTTAATTTGCTAAGACAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTCTCTCTCTCTCTTTCTTTCTTTTTTTAATTTGCTAAGACAG  991

seq1  GATCTCACCATGCACGGATGAATTC  1024
      |||||||||||||||||||||||||
seq2  GATCTCACCATGCACGGATGAATTC  1016