BAC Information

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BAC

Clone NameB6Ng01-014F06
Chromosome10 (Build37)1 (Build37)
Map Location 104,053,933 - 104,054,344114,704,619 - 114,705,700
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014F06.bB6Ng01-014F06.g
ACCDH848906DH848907
length9141,061
definitionDH848906|Mus musculus domesticus DNA, BAC clone: B6Ng01-014F06, 5' end.DH848907|Mus musculus domesticus DNA, BAC clone: B6Ng01-014F06, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,933 - 104,054,344)(114,704,619 - 114,705,700)
sequence
gaattctttgtttagctctgagccccatttttagtggggttatttgattt
tctggagtccaccttcttgagttctttatatatattgtatattagtcctc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggcctt
tttgtcttattgacggtgtcttttgccttgcagaagctttgcagtctcgt
tatgtcccatttgtcaattctcattcttacagcacaagcctttgcttctc
tattcaggaatttttcctctgtgccaatatcttcgatgcgtttcccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagatagaaatggatcaattagc
attcttctacatgataactgccagttgtgccagcatcatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccgaatggcagagaaacacctgaaaaaatgttcaacatccttaatcat
cagggaaatgcaaatcaaaacaacactgagattccactttcactgcagtc
agaatggctaagatcaaaaactcaggtgacagcagatgttggcgaggatg
tggagaaaggggaacactcctccattgttggtgggattgcaagcttgtac
aaccactctggaatcagtctggcggttcctcagaaaattgggacatagta
ctaccggaggatcccgaaatacctctcctgggcatatatcctgaagatgt
cccaccattaaaaaagaacacatgctcccctatgttcatacagccttgtt
tattatagccagaaggctggaatgaacccagatgcccctcaaagaggaat
ggatgcagaaaata
gaattcaaaatgattaattatcagattattaatagatggtgttactgaga
ggtaaatagtaaagagtcaattaaacaaatgtgcactgttgtgtttacta
caaaatcaaatagcatttctaactgtgctgctgctgcaccttttctgggt
aataaatgaatatctatttgcctaaataacgcattagtggctgaaaataa
atattcttctcatgtctagcttagtgatccagtgagttgattggagttcc
tcacaaaatgaggggtgaagcatttcttatatggacagttttgaaagaag
tacaaacccatcagtggaaagtcagccactgaagaactatcggctgttct
tctacatgtgagcaattctcctttccccagaagcctcacttatttataat
tggaaatagtcttataaatgtttctttagtttgataaaatttgtctgcct
aggtagaattatgtgtttaatatacttcctgagtcataagagccttcctt
tttcttacagaagagaccactttaattttgaggaaatagcttcacaacca
ctgtggtttggttatcaggtagctattgtcacttagaaagcagagacttt
gcattgggtctataaaaagcaatgacaggcatcatagcaggacacttttc
aacacaactgccatctaagttgagatatcatggtatgtcacttgaaaaaa
atgcaagttccttaaaacatgaacctcacacatcatctactaaacagtag
ttgtaataaatatttgtggggatgaataaagattaaataatacagtgcaa
aaaagcaattggcaaatgcccatcatatactgttaaatcaatctgtgttt
catattcccttccttctgcaagttcagaacacaacattttttggagaatg
aagaatactcaaagatagtggaaatggtaaaagttctttttctgtctctg
atagcatatatgaaattacaatttctcaatccttgtgcaaatagccacat
tgctccatgtcaccacaatagctattaattttaaaaattagaacatggta
tacttcagcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053933_104054344
seq2: B6Ng01-014F06.b_547_958 (reverse)

seq1  ATTTTCTGTATCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAG-C  49
      |||||||| ||| |||||||| ||||||||||||||||||| |||||| |
seq2  ATTTTCTGCATCCATTCCTCT-TTGAGGGGCATCTGGGTTCATTCCAGCC  49

seq1  TCCTGGCTATTATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCC  99
      | |||||||| ||||| ||||||| |||||| |||| ||||||||||| |
seq2  TTCTGGCTATAATAAACAAGGCTG-TATGAACATAGGGGAGCATGTGTTC  98

seq1  TTCTTACCGGTTGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGC  149
      || ||    | |||| ||||||| |||||||||||||| ||||||||| |
seq2  TTTTTTAATGGTGGGACATCTTCAGGATATATGCCCAGGAGAGGTATTTC  148

seq1  TGGATCCTCCGGTAGTACTATGT-CCAATTTTCTGACGAACCGCCAGACG  198
       |||||||||||||||||||||| |||||||||||| |||||||||||| 
seq2  GGGATCCTCCGGTAGTACTATGTCCCAATTTTCTGAGGAACCGCCAGACT  198

seq1  GATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAG  248
      || ||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GA-TTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAG  247

seq1  TGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTT  298
      |||||| |||||||||||||||||||| ||||||||||||||||| ||||
seq2  TGTTCCCCTTTCTCCACATCCTCGCCAACATCTGCTGTCACCTGAGTTTT  297

seq1  TGATCTTAGCCATTCTGACTGGTGTG-AGGTGGAATCTCAGGGTTGTTTT  347
      |||||||||||||||||||||  ||| | |||||||||||| ||||||||
seq2  TGATCTTAGCCATTCTGACTGCAGTGAAAGTGGAATCTCAGTGTTGTTTT  347

seq1  GATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCT  397
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGTT  397

seq1  TCTCTGCCATTCGGT  412
      |||||||||||||||
seq2  TCTCTGCCATTCGGT  412

seq1: chr1_114704619_114705700
seq2: B6Ng01-014F06.g_67_1127 (reverse)

seq1  ATGCTGAAAGTATACCCATTTGTTTCTTAATTTTTAAAAATATAATAGCT  50
      |||||| |||||||||    ||||   ||||||||||||   ||||||| 
seq2  ATGCTG-AAGTATACC---ATGTT--CTAATTTTTAAAA--TTAATAGC-  41

seq1  TATTGTGGTGACCATGGAAGCAAATGTGGCTATTTTGGCACAAGGATTGA  100
      ||||||||||| ||||| ||| |||||||||||||  |||||||||||||
seq2  TATTGTGGTGA-CATGG-AGC-AATGTGGCTATTT--GCACAAGGATTGA  86

seq1  GGATATTTTTTATTTTCTATATTATTGCATATCAGAGACAG-AAAAGAAC  149
      |   | || | ||||  ||||    ||| |||||||||||| ||||||||
seq2  G--AAATTGTAATTTCATATA----TGC-TATCAGAGACAGAAAAAGAAC  129

seq1  TTTTACCATTTCCACTATCTTTGAGTATTC-TCAATCTCCAAAAAATGTT  198
      |||||||||||||||||||||||||||||| ||| |||||||||||||||
seq2  TTTTACCATTTCCACTATCTTTGAGTATTCTTCATTCTCCAAAAAATGTT  179

seq1  GTGTTCTGAACATTGCAGAAGGAAGGGAATATGAAACACAGATTGAATTA  248
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  GTGTTCTGAAC-TTGCAGAAGGAAGGGAATATGAAACACAGATTGATTTA  228

seq1  ACAGTATATGATTGGCATTTTGCCAATTGCTTTTGTGCACTGTATTATTT  298
      |||||||||||| |||| |||||||||||||||| |||||||||||||||
seq2  ACAGTATATGATGGGCA-TTTGCCAATTGCTTTTTTGCACTGTATTATTT  277

seq1  AATCTTTATTCATCCCCACAAATATTTATTACAACTACTGTTTAGTAGAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTATTCATCCCCACAAATATTTATTACAACTACTGTTTAGTAGAT  327

seq1  GATGTGTGAGGTTCATGTTTTAAGGAACTTGCATTTTTTTCAAGTGACAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGTGAGGTTCATGTTTTAAGGAACTTGCATTTTTTTCAAGTGACAT  377

seq1  ACCATGATATCTCAACTTAGATGGCAGTTGTGTTGAAAAGTGTCCTGCTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGATATCTCAACTTAGATGGCAGTTGTGTTGAAAAGTGTCCTGCTA  427

seq1  TGATGCCTGTCATTGCTTTTTATAGACCCAATGCAAAGTCTCTGCTTTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCTGTCATTGCTTTTTATAGACCCAATGCAAAGTCTCTGCTTTCT  477

seq1  AAGTGACAATAGCTACCTGATAACCAAACCACAGTGGTTGTGAAGCTATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACAATAGCTACCTGATAACCAAACCACAGTGGTTGTGAAGCTATT  527

seq1  TCCTCAAAATTAAAGTGGTCTCTTCTGTAAGAAAAAGGAAGGCTCTTATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAAATTAAAGTGGTCTCTTCTGTAAGAAAAAGGAAGGCTCTTATG  577

seq1  ACTCAGGAAGTATATTAAACACATAATTCTACCTAGGCAGACAAATTTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAAGTATATTAAACACATAATTCTACCTAGGCAGACAAATTTTA  627

seq1  TCAAACTAAAGAAACATTTATAAGACTATTTCCAATTATAAATAAGTGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTAAAGAAACATTTATAAGACTATTTCCAATTATAAATAAGTGAG  677

seq1  GCTTCTGGGGAAAGGAGAATTGCTCACATGTAGAAGAACAGCCGATAGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGGGGAAAGGAGAATTGCTCACATGTAGAAGAACAGCCGATAGTT  727

seq1  CTTCAGTGGCTGACTTTCCACTGATGGGTTTGTACTTCTTTCAAAACTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTGGCTGACTTTCCACTGATGGGTTTGTACTTCTTTCAAAACTGT  777

seq1  CCATATAAGAAATGCTTCACCCCTCATTTTGTGAGGAACTCCAATCAACT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATAAGAAATGCTTCACCCCTCATTTTGTGAGGAACTCCAATCAACT  827

seq1  CACTGGATCACTAAGCTAGACATGAGAAGAATATTTATTTTCAGCCACTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGATCACTAAGCTAGACATGAGAAGAATATTTATTTTCAGCCACTA  877

seq1  ATGCGTTATTTAGGCAAATAGATATTCATTTATTACCCAGAAAAGGTGCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGTTATTTAGGCAAATAGATATTCATTTATTACCCAGAAAAGGTGCA  927

seq1  GCAGCAGCACAGTTAGAAATGCTATTTGATTTTGTAGTAAACACAACAGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGCACAGTTAGAAATGCTATTTGATTTTGTAGTAAACACAACAGT  977

seq1  GCACATTTGTTTAATTGACTCTTTACTATTTACCTCTCAGTAACACCATC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTTGTTTAATTGACTCTTTACTATTTACCTCTCAGTAACACCATC  1027

seq1  TATTAATAATCTGATAATTAATCATTTTGAATTC  1082
      ||||||||||||||||||||||||||||||||||
seq2  TATTAATAATCTGATAATTAATCATTTTGAATTC  1061