BAC Information

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BAC

Clone NameB6Ng01-014H22
Chromosome10 (Build37)
Map Location 127,581,182 - 127,670,172
singlet/doubletdoublet
Overlap geneRbms2, LOC100043624, Gls2, Spryd4, Mip
Upstream geneLOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085
Downstream geneTimeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014H22.bB6Ng01-014H22.g
ACCDH849018DH849019
length1,063975
definitionDH849018|Mus musculus domesticus DNA, BAC clone: B6Ng01-014H22, 5' end.DH849019|Mus musculus domesticus DNA, BAC clone: B6Ng01-014H22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,581,182 - 127,582,248)(127,669,194 - 127,670,172)
sequence
gaattcctgatccttctgtctccttcccaagtgctgggatcacaggtgtg
tgcacaacacccactccagagctgttttcaagcctgtcaatcattacact
gctttagtcagtccttttcagcaaccttaatcccactttcaacttccgtt
tctttcccttttttttccacctaaaatttattttttactttacatctatg
ggtggttttgtttgtttgtttgttttttgtttttgcctgtatgtatgtct
gtgtatggtgtgcatataagcatccagaaagaccaaaagagggcacttcc
ctggaactagagttaagatgcctttaaggtaccggggtgggtactggaaa
ttgaccccaggacctttggaagaacagccagtgtactctctccaatccac
tcacctcctgcccttctctcctcttcctcctcctctccctccttttcctt
ttcctcttcctcctcctcctcttctctttctccttttctcttttgagaca
agcaaggtcttactctgtagcccaggctggcctaaaacaaactctcacta
tctttgcctcccaagtgctggaatgacttgagacatcacacccagcttca
tttcccctttaacctttagagaaaagaatggctatgttggggctagagcg
atggttaaaagcactggctgctctctgagagatcttgagttcaattccta
gcacctcatggtgatgtacaacccactgtaactctacccttatcagcctc
ttcagagtattcaaggtgcctcagtatggttgaaaggatttcagaaaggc
ttctagctttctagagactgacatgggggagagtgagcatacaacatttt
catctctagggaaatcaagcagaaggtacagttctcttcctttcttgctg
tagcttcctccctttcctcagctccttcccagctcactccctgttcccac
gggagcagttgcaggtcatggaaagcactcttcagaacctaagttgccca
tttggcttcagagaattgtttgcaaacagaaccattcgtgcctaggaaag
ggggcaaggtgga
gaattccagcccagccaggactgagaccctgtccttttatttatgattca
tctttctgtgtgttcctgttcatgggattcagttctctccttccaccatg
agggcccctaagacttcattcaaatcctcaggctggtaacaagcaaccca
acctgctgaggctttgtctgtggggtaactagcttggagggctggataaa
ctgaattactggaatttagggcaactgcacttaagtgacaagaactctcc
agcagagggagttcaagtaccttgaggtacgagcggacgcgaagcaaaca
catcctttccctgaggttggaagtcaaactggatgagaaaaatgtcaggg
acgcaagacacccacctgggtaagcaaaaccgtacgcgaccaaaatgggg
tttcaaagtaaatgtaaaaccacgggcttcagtttttttgatttttgttt
tccaaaacaaggttctagtgacagcatcaaagacaaagaaatgacactcc
aggaaagaagcttaactaatggctcttgtcctagctgacacccctagagg
ttgtgtccttcttaggcaagaggatcgaaccaggcctatgaagaccccaa
agcctgagaatcctggctcctgacgacctccaggccactgtgtcttcggg
tctggactgcagaagggttctgttctactctcggaactcgaagatcctgg
cctcaccgtcccttccctagcccgagctcggggtgtgcagagacccgcga
aaacccggcaggtctccggcgcgctcgcccgggagcaggatcagaacgcg
cgtgcgcgccgggagccccgccccgcccttcaaccgcgcggcgggaaagt
agccgctcactgcttcgctgctcgcgccccgccgtcccacaacctcaggg
acgcccgttgtcggtcttgggtccttcggacacactcaacgctctccgcg
agtcctctgaagcctcgcgagcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_127581182_127582248
seq2: B6Ng01-014H22.b_49_1111

seq1  GAATTCCTGATCCTTCTGTCTCCTTCCCAAGTGCTGGGATCACAGGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCCTTCTGTCTCCTTCCCAAGTGCTGGGATCACAGGTGTG  50

seq1  TGCACAACACCCACTCCAGAGCTGTTTTCAAGCCTGTCAATCATTACACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAACACCCACTCCAGAGCTGTTTTCAAGCCTGTCAATCATTACACT  100

seq1  GCTTTAGTCAGTCCTTTTCAGCAACCTTAATCCCACTTTCAACTTCCGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGTCAGTCCTTTTCAGCAACCTTAATCCCACTTTCAACTTCCGTT  150

seq1  TCTTTCCCTTTTTTTTCCACCTAAAATTTATTTTTTACTTTACATCTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCCTTTTTTTTCCACCTAAAATTTATTTTTTACTTTACATCTATG  200

seq1  GGTGGTTTTGTTTGTTTGTTTGTTTTTTGTTTTTGCCTGTATGTATGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTTTTGTTTGTTTGTTTGTTTTTTGTTTTTGCCTGTATGTATGTCT  250

seq1  GTGTATGGTGTGCATATAAGCATCCAGAAAGACCAAAAGAGGGCACTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGGTGTGCATATAAGCATCCAGAAAGACCAAAAGAGGGCACTTCC  300

seq1  CTGGAACTAGAGTTAAGATGCCTTTAAGGTACCGGGGTGGGTACTGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTAGAGTTAAGATGCCTTTAAGGTACCGGGGTGGGTACTGGAAA  350

seq1  TTGACCCCAGGACCTTTGGAAGAACAGCCAGTGTACTCTCTCCAATCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCCCAGGACCTTTGGAAGAACAGCCAGTGTACTCTCTCCAATCCAC  400

seq1  TCACCTCCTGCCCTTCTCTCCTCTTCCTCCTCCTCTCCCTCCTTTTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCCTGCCCTTCTCTCCTCTTCCTCCTCCTCTCCCTCCTTTTCCTT  450

seq1  TTCCTCTTCCTCCTCCTCCTCTTCTCTTTCTCCTTTTCTCTTTTGAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTTCCTCCTCCTCCTCTTCTCTTTCTCCTTTTCTCTTTTGAGACA  500

seq1  AGCAAGGTCTTACTCTGTAGCCCAGGCTGGCCTAAAACAAACTCTCACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGTCTTACTCTGTAGCCCAGGCTGGCCTAAAACAAACTCTCACTA  550

seq1  TCTTTGCCTCCCAAGTGCTGGAATGACTTGAGACATCACACCCAGCTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCCTCCCAAGTGCTGGAATGACTTGAGACATCACACCCAGCTTCA  600

seq1  TTTCCCCTTTAACCTTTAGAGAAAAGAATGGCTATGTTGGGGCTAGAGCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTTTAACCTTTAGAGAAAAGAATGGCTATGTTGGGGCTAGAGCG  650

seq1  ATGGTTAAAAGCACTGGCTGCTCTCTGAGAGATCTTGAGTTCAATTCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTAAAAGCACTGGCTGCTCTCTGAGAGATCTTGAGTTCAATTCCTA  700

seq1  GCACCTCATGGTGATGTACAACCCACTGTAACTCTACCCTTATCAGCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTCATGGTGATGTACAACCCACTGTAACTCTACCCTTATCAGCCTC  750

seq1  TTCAGAGTATTCAAGGTGCCTCAGTATGGTTGAAAGGATTTCAGAAAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGTATTCAAGGTGCCTCAGTATGGTTGAAAGGATTTCAGAAAGGC  800

seq1  TTCTAGCTTTCTAGAGACTGACATGGGGGAGAGTGAGCATACAACATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGCTTTCTAGAGACTGACATGGGGGAGAGTGAGCATACAACATTTT  850

seq1  CATCTCTAGGGAAATCAAAGCAGAAGGTACAGTTCTCTTCCTTTCTTGCT  900
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CATCTCTAGGGAAATC-AAGCAGAAGGTACAGTTCTCTTCCTTTCTTGCT  899

seq1  GTAGCTTCCTCCCTTTCCCTCAGCCCCTTCCCCAGCTCACTCCCTG-TCC  949
      |||||||||||||||| ||||||| |||| |||||||||||||||| |||
seq2  GTAGCTTCCTCCCTTT-CCTCAGCTCCTT-CCCAGCTCACTCCCTGTTCC  947

seq1  CACGGGAGCAGTGGCAGGTCATGGAAAGCACTCTTCAGAACCTAAGTTGC  999
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CACGGGAGCAGTTGCAGGTCATGGAAAGCACTCTTCAGAACCTAAGTTGC  997

seq1  ACAATTGGGCTTCAGAGAAT--GTTGCAAAACTAGAACCATCTGT-CCTA  1046
       | ||| |||||||||||||   |||||||   ||||||||  || ||||
seq2  -CCATTTGGCTTCAGAGAATTGTTTGCAAA--CAGAACCATTCGTGCCTA  1044

seq1  GGAAAGTGGGGCCAGGGTGGA  1067
      |||||  |||| || ||||||
seq2  GGAAA--GGGGGCAAGGTGGA  1063

seq1: chr10_127669194_127670172
seq2: B6Ng01-014H22.g_66_1040 (reverse)

seq1  CAGGCTCTGCGAGGCTTCAGAGGACTCGCGGAGAGCGGGTGAGTGTGTCC  50
      ||||||| |||||||||||||||||||||||||||| | |||||||||||
seq2  CAGGCTC-GCGAGGCTTCAGAGGACTCGCGGAGAGC-GTTGAGTGTGTCC  48

seq1  GGAGGACCCAGGACCGACAACGGGCGTCCCTGAGGTGGTGGGACGGCGGG  100
      | |||||||| ||||||||||||||||||||||||| |||||||||||||
seq2  GAAGGACCCAAGACCGACAACGGGCGTCCCTGAGGTTGTGGGACGGCGGG  98

seq1  GCGGCGAGCAGCGGAGCAGTGAGCGGCTACTTTCCCGCCGCGCGGTTGAA  150
      || |||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GC-GCGAGCAGCGAAGCAGTGAGCGGCTACTTTCCCGCCGCGCGGTTGAA  147

seq1  GGGCGGGGGCGGGGCTCCCGGCGCGCACGCGCGTTCTGATCCTGCTCCCG  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGC-GGGGCGGGGCTCCCGGCGCGCACGCGCGTTCTGATCCTGCTCCCG  196

seq1  GGCGAGCGCGCCGGAGACCTGCCGGGTTTTCGCGGGTCTCTGCACACCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGAGCGCGCCGGAGACCTGCCGGGTTTTCGCGGGTCTCTGCACACCCC  246

seq1  GAGCTCGGGCTAGGGAAGGGACGGTGAGGCCAGGATCTTCGAGTTCCGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCGGGCTAGGGAAGGGACGGTGAGGCCAGGATCTTCGAGTTCCGAG  296

seq1  AGTAGAACAGAACCCTTCTGCAGTCCAGACCCGAAGACACAGTGGCCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAACAGAACCCTTCTGCAGTCCAGACCCGAAGACACAGTGGCCTGG  346

seq1  AGGTCGTCAGGAGCCAGGATTCTCAGGCTTTGGGGTCTTCATAGGCCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCGTCAGGAGCCAGGATTCTCAGGCTTTGGGGTCTTCATAGGCCTGG  396

seq1  TTCGATCCTCTTGCCTAAGAAGGACACAACCTCTAGGGGTGTCAGCTAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGATCCTCTTGCCTAAGAAGGACACAACCTCTAGGGGTGTCAGCTAGG  446

seq1  ACAAGAGCCATTAGTTAAGCTTCTTTCCTGGAGTGTCATTTCTTTGTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGCCATTAGTTAAGCTTCTTTCCTGGAGTGTCATTTCTTTGTCTT  496

seq1  TGATGCTGTCACTAGAACCTTGTTTTGGAAAACAAAAATCAAAAAAACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTGTCACTAGAACCTTGTTTTGGAAAACAAAAATCAAAAAAACTG  546

seq1  AAGCCCGTGGTTTTACATTTACTTTGAAACCCCATTTTGGTCGCGTACGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCGTGGTTTTACATTTACTTTGAAACCCCATTTTGGTCGCGTACGG  596

seq1  TTTTGCTTACCCAGGTGGGTGTCTTGCGTCCCTGACATTTTTCTCATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTACCCAGGTGGGTGTCTTGCGTCCCTGACATTTTTCTCATCCA  646

seq1  GTTTGACTTCCAACCTCAGGGAAAGGATGTGTTTGCTTCGCGTCCGCTCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGACTTCCAACCTCAGGGAAAGGATGTGTTTGCTTCGCGTCCGCTCG  696

seq1  TACCTCAAGGTACTTGAACTCCCTCTGCTGGAGAGTTCTTGTCACTTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCAAGGTACTTGAACTCCCTCTGCTGGAGAGTTCTTGTCACTTAAG  746

seq1  TGCAGTTGCCCTAAATTCCAGTAATTCAGTTTATCCAGCCCTCCAAGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTGCCCTAAATTCCAGTAATTCAGTTTATCCAGCCCTCCAAGCTA  796

seq1  GTTACCCCACAGACAAAGCCTCAGCAGGTTGGGTTGCTTGTTACCAGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCCCACAGACAAAGCCTCAGCAGGTTGGGTTGCTTGTTACCAGCCT  846

seq1  GAGGATTTGAATGAAGTCTTAGGGGCCCTCATGGTGGAAGGAGAGAACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTTGAATGAAGTCTTAGGGGCCCTCATGGTGGAAGGAGAGAACTG  896

seq1  AATCCCATGAACAGGAACACACAGAAAGATGAATCATAAATAAAAGGACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCATGAACAGGAACACACAGAAAGATGAATCATAAATAAAAGGACA  946

seq1  GGGTCTCAGTCCTGGCTGGGCTGGAATTC  979
      |||||||||||||||||||||||||||||
seq2  GGGTCTCAGTCCTGGCTGGGCTGGAATTC  975