BAC Information

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BAC

Clone NameB6Ng01-014P11
Chromosome10 (Build37)
Map Location 70,723,094 - 70,863,151
singlet/doubletdoublet
Overlap geneUbe2d1, LOC665472, Zcd1, Ipmk
Upstream geneSlc16a9, LOC632955, 1200015N20Rik, LOC665398, Phyhipl, EG665429, Bicc1, LOC622551, C730027H18Rik, Tfam
Downstream geneLOC100039860, LOC216081, EG216082, LOC622812, EG327767, 1700049L16Rik, LOC100040505
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014P11.bB6Ng01-014P11.g
ACCDH849362DH849363
length1601,075
definitionDH849362|Mus musculus domesticus DNA, BAC clone: B6Ng01-014P11, 5' end.DH849363|Mus musculus domesticus DNA, BAC clone: B6Ng01-014P11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,723,094 - 70,723,255)(70,862,075 - 70,863,151)
sequence
gaattcagtgttcatgatatgttgaattaagaatcaactttagtgtaatg
gggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctgtgtgtata
tgtatgtgtgtatatgtacatgtgtatatatgtatgtgtgtgcgctatgt
gagaatatgc
gaattcctttctccattgttgaaaggaattgttcaaaactgggcttagtt
tcgattggtgaagcatggtcagcacttgggcgggagaggcaggagaatta
ggagttcaaggtcatccttgcctgtacagggtgagtttgaagcccgcctc
aaaacggcaaacctaccttagacagctgtgatgacaactagaaacaacac
gtggtattgttatgactccgacctcggtccccagctttgtggtgctagtc
tgagggctgtgcagccttagggggcgaggcttagatgaaaaccaggggca
tcatgggaagggacatgcacagtagggaaggggttctgtaacttgaaaac
taccaatcaagacagagagccatctaaactatatccccagtaacctaatt
ctcccttctcatgaaccccacccacacacccaaaacaaagtttcaggctg
aatttttccacatcagttaaaaggacaaaaaccatgccccgaagacattt
ccacaagccaacccattccaaacaactcctcatagggattctcttcccag
ataatcctaggttagaggacagtgttgactattaaagctagcaatcactt
caagttcctgaggccataaatcagaaccatcccctgtgtaaggaggcacc
ggatgatttttgtccagggaaaaaccttcctgattgtgacacacttggag
cttatagaactctgagggtgtgtgacagtcaggcgtcattcagtcccggt
tgtgtcccccgccccccacctccctccccaaggctgagtgcaatgactac
actaccagaactgcggttgctgtgttagtcagataggtaccttatctgat
aagagcggcctggaaatgaaaatagagaacaaagtcacagataggggaac
ggaagattctggaggagatagtgaacacttcagatctcacctagtatgag
aaaaaattgcctgtaggatttctgatccatggcggaccacttgatttgca
tttagtgactctttcttgctgctacacgggggcgggggtggcgagctggg
caatgagaactcttgggagtcctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_70723094_70723255
seq2: B6Ng01-014P11.b_40_199

seq1  GAATTCAGTGTTCATGATATGTTGAATTAAGAATCAACTTTAGTGTAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTTCATGATATGTTGAATTAAGAATCAACTTTAGTGTAATG  50

seq1  GGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTACATGTGTGTAT  100
      |||||||||||||||||||||||||||||||||| ||| | |||||||||
seq2  GGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC-TGTGTGTAT  99

seq1  ATGTATGTGTGTATATGTACATGTGTATATATGTATGTGTGTGCGCATAT  150
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGTATGTGTGTATATGTACATGTGTATATATGTATGTGTGTGCGC-TAT  148

seq1  GTGTGTATATGC  162
      ||| | ||||||
seq2  GTGAGAATATGC  160

seq1: chr10_70862075_70863151
seq2: B6Ng01-014P11.g_68_1142 (reverse)

seq1  AGAGGACTCC--AGAGTTCTCCATTGCCCCAGCTTCGCC-CACCCGCCCC  47
      ||||||||||  |||||||| ||||| |||||| ||||| | ||||||||
seq2  AGAGGACTCCCAAGAGTTCT-CATTG-CCCAGC-TCGCCACCCCCGCCCC  47

seq1  CGTGTAGCAGCAAG-AAGAGTCACTAAAATGCAAATCAAGTGGTTCCGCC  96
      |||||||||||||| |||||||||| ||||||||||||||||| ||||||
seq2  CGTGTAGCAGCAAGAAAGAGTCACT-AAATGCAAATCAAGTGG-TCCGCC  95

seq1  ATGGATCAG-AATCCTACA-GCAATTTTTTCTCATACTTAGGTGAGATCT  144
      ||||||||| ||||||||| ||||||||||||||||| ||||||||||||
seq2  ATGGATCAGAAATCCTACAGGCAATTTTTTCTCATAC-TAGGTGAGATCT  144

seq1  GAAGTGTTCACTATCTCTTCCAGAATCTTCCGTTCCCTTATCTGTGACTT  194
      ||||||||||||||||| ||||||||||||||||||| ||||||||||||
seq2  GAAGTGTTCACTATCTCCTCCAGAATCTTCCGTTCCCCTATCTGTGACTT  194

seq1  TGTTCTCTTATATCATTTCCA-GCCGCTCTTATCAGATAAGGTACCTATC  243
      ||||||||  | ||||||||| ||||||||||||||||||||||||||||
seq2  TGTTCTCTATTTTCATTTCCAGGCCGCTCTTATCAGATAAGGTACCTATC  244

seq1  TGACTAACACAGCAACCGCAGTTCTGGTAGTGTAGTCATTTGCACTCAGC  293
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGACTAACACAGCAACCGCAGTTCTGGTAGTGTAGTCA-TTGCACTCAGC  293

seq1  CTTGGGGAGGGGAGGTGGGGGGCGGGGGACACAACCGGGACCTGAATGAC  343
      |||||||| ||||||||||||||||||||||||||||||| |||||||||
seq2  CTTGGGGA-GGGAGGTGGGGGGCGGGGGACACAACCGGGA-CTGAATGAC  341

seq1  GCCTGACTGTCACACACCCTCAGAGTTCTATAAGCTCCAAGTGTGTCACA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGACTGTCACACACCCTCAGAGTTCTATAAGCTCCAAGTGTGTCACA  391

seq1  ATCAGGAAGGTTTTTCCCTGGACAAAAATCATCCGGTGCCTCCTTACACA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGAAGGTTTTTCCCTGGACAAAAATCATCCGGTGCCTCCTTACACA  441

seq1  GGGGATGGTTCTGATTTATGGCCTCAGGAACTTGAAGTGATTGCTAGCTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGGTTCTGATTTATGGCCTCAGGAACTTGAAGTGATTGCTAGCTT  491

seq1  TAATAGTCAACACTGTCCTCTAACCTAGGATTATCTGGGAAGAGAATCCC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTCAACACTGTCCTCTAACCTAGGATTATCTGGGAAGAGAATCCC  541

seq1  TATGAGGAGTTGTTTGGAATGGGTTGGCTTGTGGAAATGTCTTCGGGGCA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGAGTTGTTTGGAATGGGTTGGCTTGTGGAAATGTCTTCGGGGCA  591

seq1  TGGTTTTTGTCCTTTTAACTGATGTGGAAAAATTCAGCCTGAAACTTTGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTGTCCTTTTAACTGATGTGGAAAAATTCAGCCTGAAACTTTGT  641

seq1  TTTGGGTGTGTGGGTGGGGTTCATGAGAAGGGAGAATTAGGTTACTGGGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTGTGTGGGTGGGGTTCATGAGAAGGGAGAATTAGGTTACTGGGG  691

seq1  ATATAGTTTAGATGGCTCTCTGTCTTGATTGGTAGTTTTCAAGTTACAGA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTTAGATGGCTCTCTGTCTTGATTGGTAGTTTTCAAGTTACAGA  741

seq1  ACCCCTTCCCTACTGTGCATGTCCCTTCCCATGATGCCCCTGGTTTTCAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTCCCTACTGTGCATGTCCCTTCCCATGATGCCCCTGGTTTTCAT  791

seq1  CTAAGCCTCGCCCCCTAAGGCTGCACAGCCCTCAGACTAGCACCACAAAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCTCGCCCCCTAAGGCTGCACAGCCCTCAGACTAGCACCACAAAG  841

seq1  CTGGGGACCGAGGTCGGAGTCATAACAATACCACGTGTTGTTTCTAGTTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGACCGAGGTCGGAGTCATAACAATACCACGTGTTGTTTCTAGTTG  891

seq1  TCATCACAGCTGTCTAAGGTAGGTTTGCCGTTTTGAGGCGGGCTTCAAAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACAGCTGTCTAAGGTAGGTTTGCCGTTTTGAGGCGGGCTTCAAAC  941

seq1  TCACCCTGTACAGGCAAGGATGACCTTGAACTCCTAATTCTCCTGCCTCT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTGTACAGGCAAGGATGACCTTGAACTCCTAATTCTCCTGCCTCT  991

seq1  CCCGCCCAAGTGCTGACCATGCTTCACCAATCGAAACTAAGCCCAGTTTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCCCAAGTGCTGACCATGCTTCACCAATCGAAACTAAGCCCAGTTTT  1041

seq1  GAACAATTCCTTTCAACAATGGAGAAAGGAATTC  1077
      ||||||||||||||||||||||||||||||||||
seq2  GAACAATTCCTTTCAACAATGGAGAAAGGAATTC  1075