BAC Information

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BAC

Clone NameB6Ng01-015G02
Chromosome10 (Build37)
Map Location 111,692,639 - 111,693,539
singlet/doubletsinglet
Overlap genenone
Upstream geneOsbpl8, Bbs10, Nap1l1, EG382421, Phlda1, Krr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2
Downstream geneKcnc2, LOC100042639, 4921506J03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015G02.g
ACCDH849653
length898
definitionDH849653|Mus musculus domesticus DNA, BAC clone: B6Ng01-015G02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattattaatgctgctgttgtaacgtgagatgttctgcgataaaa
aactgttaccaaaattcactttgtattttcgtggttctgtcagtcttggt
tgacagcctaataaattactacaccaatttaagtggacatcagacacaga
tgatggaactatcaatgaagtggaaggtatgtcaaactgtaggaaatatg
gagtctgaagcacaccttgggaaaaggaataaaataaagaaaaccatgct
cctgatatatggaatgctgcacaagggttgacctcatgctaagattcccc
aacggaaacaaccacggcaattaaaccgagcatacttttaagagatcgaa
ggtggctgtgtcccaaacttgataagaacatcaaaccacatattcaagaa
ctgctcctgcagcaaaagcaagattaataaagtgataattatccctaggc
acgtccaattgaaactgctaaaaaacgggcagataaaatattcaaatgta
gccaaagcccacacactcctgtgaagtgagtcacggcaacaccagcagct
aggttataaacaggaacagtagatgctgtggaaataaaatgacgtctcca
aagtattagaagaaaatccatataatcctaagtctgtatgcacctgaaat
atcattcacacgcgtgtgcactcgcacactcacatgtgcactcacacgct
cctgtgcgctctcacacatgcacacacagacacacagacgcacacacaca
ctcatctaagagaaaactgtctactggagacccacctgaaacaaatatta
agcatatataacagtcccaagaagaagaaagaaatatgaatgaaaactat
gataaattttttggatgaagcttaatctgaaatggaaaattgactttt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_111692639_111693539
seq2: B6Ng01-015G02.g_70_967 (reverse)

seq1  AAAAGTCAATTTTTACATTTTAGATTTAGCTTCATCCATATACTTTTATC  50
      ||||||||| |||| ||||| ||||| ||||||||||| | |  ||||||
seq2  AAAAGTCAA-TTTTCCATTTCAGATTAAGCTTCATCCA-AAAAATTTATC  48

seq1  AT-GGCTTCATTCATTATTCTTTCTTCATCTTGGAACTGTTTATATATGC  99
      || |  |||||||||  |||||||||| |||||| |||| ||||||||||
seq2  ATAGTTTTCATTCATATTTCTTTCTTCTTCTTGGGACTG-TTATATATGC  97

seq1  TTAATATTTCTTTCAGGTGGATCTCCTGTTGACAGTTTT-TCTTAGGTGA  148
      ||||||||| |||||||||| ||||| || ||||||||| |||||| |||
seq2  TTAATATTTGTTTCAGGTGGGTCTCCAGTAGACAGTTTTCTCTTAGATGA  147

seq1  GTGTGTGTGTGTGTCTGTGTGTCTGTGTGTGCATGTGTGTGAGTGCACAT  198
      ||||||||||| ||||||||||||||||||||||||||| ||| ||||| 
seq2  GTGTGTGTGTGCGTCTGTGTGTCTGTGTGTGCATGTGTGAGAGCGCACAG  197

seq1  GTGTGTGTGAGTGCACATGTGTGTGTGTGAGTGCACACGTGTGTGAATGA  248
      | | ||||||||||||||||| ||||| ||||||||||| ||||||||||
seq2  GAGCGTGTGAGTGCACATGTGAGTGTGCGAGTGCACACGCGTGTGAATGA  247

seq1  TATTTCAGGTGCATACAGACTTAGGATTATATTGATTTTCTTCTAATACT  298
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATTTCAGGTGCATACAGACTTAGGATTATATGGATTTTCTTCTAATACT  297

seq1  TTGGAGACGTCATTTTATTTCCACAGCATCTACTGTTCCTGTTTATAACC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGACGTCATTTTATTTCCACAGCATCTACTGTTCCTGTTTATAACC  347

seq1  TAGCTGCTGGTGTTGCCGTGACTCACTTCAGAGGAGTGTGTGGGCTTTGG  398
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAGCTGCTGGTGTTGCCGTGACTCACTTCACAGGAGTGTGTGGGCTTTGG  397

seq1  CTACATTTGAATATTTTATCTGCCCGTTTTTTAGCAGTTTCAATTGGACG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTTGAATATTTTATCTGCCCGTTTTTTAGCAGTTTCAATTGGACG  447

seq1  TGCCTAGGTATAATTATCACTTTATTAATCTTGCTTTTGCTGCAGGAGCA  498
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGGGATAATTATCACTTTATTAATCTTGCTTTTGCTGCAGGAGCA  497

seq1  GTTCTTGAATATGTGGTTTGATGTTCTTATCAAGTTTGGAACATTGCCAA  548
      ||||||||||||||||||||||||||||||||||||||| |||  |||| 
seq2  GTTCTTGAATATGTGGTTTGATGTTCTTATCAAGTTTGGGACACAGCCAC  547

seq1  CCTCGATCTCTTTAAATTATGCTCCGTTTAATTGCCGTGGTTCTTTCCTT  598
      | |||||||||| ||| ||||||| ||||||||||||||||| ||||| |
seq2  CTTCGATCTCTTAAAAGTATGCTCGGTTTAATTGCCGTGGTTGTTTCCGT  597

seq1  TGGGGAATCTTAGCATTACGTCAAACCTTGTGCAGCATTCCATATATCAG  648
      |||||||||||||||| | ||||| |||||||||||||||||||||||||
seq2  TGGGGAATCTTAGCATGAGGTCAACCCTTGTGCAGCATTCCATATATCAG  647

seq1  GAGCATTGTTTTCTTTATTTTATTCCTTTTCCCTGTGTGTGCTTCAGACT  698
      |||||| ||||||||||||||||||||||||||   ||||||||||||||
seq2  GAGCATGGTTTTCTTTATTTTATTCCTTTTCCCAAGGTGTGCTTCAGACT  697

seq1  CCATATTTCCTACAGTTTGACATACCTTCCACTTCATTGATAGTTCCATC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTTCCTACAGTTTGACATACCTTCCACTTCATTGATAGTTCCATC  747

seq1  ATCTGTGTCTGATGTCCACTTAAACTGGTGTAGTAATTTATTAGGCTGTC  798
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATCTGTGTCTGATGTCCACTTAAATTGGTGTAGTAATTTATTAGGCTGTC  797

seq1  AACCAAGACTGACAGTGACCACGAAAATACAAAGTGAATTTTGGTAATTG  848
      |||||||||||||||  ||||||||||||||||||||||||||||||  |
seq2  AACCAAGACTGACAG-AACCACGAAAATACAAAGTGAATTTTGGTAACAG  846

seq1  TTTTTTATTTGCAGAACATCTCATGTTACAACAGCAGCTTTAATAATGAA  898
      ||||||| | ||||||||||||| |||||||||||||| |||||||||||
seq2  TTTTTTA-TCGCAGAACATCTCACGTTACAACAGCAGCATTAATAATGAA  895

seq1  TTC  901
      |||
seq2  TTC  898