BAC Information

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BAC

Clone NameB6Ng01-015H19
Chromosome10 (Build37)
Map Location 119,548,824 - 119,693,464
singlet/doubletdoublet
Overlap geneHelb, Irak3, Tmbim4, 1190005P17Rik
Upstream geneLOC100042861, LOC674417, Cand1, Grip1
Downstream geneHmga2, LOC100042902, Msrb3, LOC100043488, Lemd3, Wif1, LOC100042911
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015H19.bB6Ng01-015H19.g
ACCDH849732DH849733
length448580
definitionDH849732|Mus musculus domesticus DNA, BAC clone: B6Ng01-015H19, 5' end.DH849733|Mus musculus domesticus DNA, BAC clone: B6Ng01-015H19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,548,824 - 119,549,277)(119,692,885 - 119,693,464)
sequence
aattcccagcaaccacatggtggttcgcaatcatctataatgggatctga
tgccctcttctggtatgcaggtatagatgcagatagagcactcatgtaca
caaaataaataaatctcaaaaaaaaaaaaaaaccaaaatggctgcttaat
tcacaagtagtatttccactgagacagcaacttcgccattttctctccct
ggcctgtcccagtagcaaatgcttggccaggatagccagttacacttcca
tcaacatgtaatcctttctatttaatttcaaacacagccaaagttgtgtt
taaattgccaatggtcagttgccacacatggtcctggtcagcagctatta
ctgtactagaccatgaaaatacaatgtgtgtgtgtgtgtgtgtgtgtatg
aacatgtatgtgtgaatgtgtgggcatgtatatgtatgtgtaagtgta
gaattccaaaccagtgtgcatgttgaagctaaaatccaaacttttgagag
agaagagggtctctcttgaatcaaatatcagctcagccccttgtaagttc
tgtggttttctgaagtctttaaaataaaaatgattatgtaaagacattgg
cagacactgcggatcagtgacgatccatacactttttacatcaaatccag
gacaatttgcatgtccttaaaatactcatgcggcctgtgaaagcaataga
gtcagatactaatcatttcagcagcaagtttcttcttagaagtacgagag
tagacacaggaaggagttaggtgttttcaagagtgtgtactataaagtcc
tggggcctggcagaaaccttaaacaacaggtcctagagtctacaagactg
tccaagccgtaaaggcggcccatgtgcacacctgatgacccgagtctgac
tcacagacccagattcacatacaattggaaggagagaactttgtgaaatt
gtgctctgacctctacatgcatgtcctgacctccaaaatccccagtcttg
tatgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_119548824_119549277
seq2: B6Ng01-015H19.b_47_500

seq1  GAATTCAATTCCCAGCAACCACATGGTGGTTCGCAATCATCTATAATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCCCAGCAACCACATGGTGGTTCGCAATCATCTATAATGGG  50

seq1  ATCTGATGCCCTCTTCTGGTATGCAGGTATAGATGCAGATAGAGCACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATGCCCTCTTCTGGTATGCAGGTATAGATGCAGATAGAGCACTCA  100

seq1  TGTACACAAAATAAATAAATCTCAAAAAAAAAAAAAAACCAAAATGGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACAAAATAAATAAATCTCAAAAAAAAAAAAAAACCAAAATGGCTG  150

seq1  CTTAATTCACAAGTAGTATTTCCACTGAGACAGCAACTTCGCCATTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTCACAAGTAGTATTTCCACTGAGACAGCAACTTCGCCATTTTCT  200

seq1  CTCCCTGGCCTGTCCCAGTAGCAAATGCTTGGCCAGGATAGCCAGTTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGGCCTGTCCCAGTAGCAAATGCTTGGCCAGGATAGCCAGTTACA  250

seq1  CTTCCATCAACATGTAATCCTTTCTATTTAATTTCAAACACAGCCAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATCAACATGTAATCCTTTCTATTTAATTTCAAACACAGCCAAAGT  300

seq1  TGTGTTTAAATTGCCAATGGTCAGTTGCCACACATGGTCCTGGTCAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTAAATTGCCAATGGTCAGTTGCCACACATGGTCCTGGTCAGCAG  350

seq1  CTATTACTGTACTAGACCATGAAAATACAATGTGTGTGTGTGTGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACTGTACTAGACCATGAAAATACAATGTGTGTGTGTGTGTGTGTG  400

seq1  TGTATGAACATGTATGTGTGAATGTGTGGGCATGTATATGTATGTGTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGAACATGTATGTGTGAATGTGTGGGCATGTATATGTATGTGTAAG  450

seq1  TGTA  454
      ||||
seq2  TGTA  454

seq1: chr10_119692885_119693464
seq2: B6Ng01-015H19.g_68_647 (reverse)

seq1  CACACACACACACACACACACACACACATACAAGACTGGGGATTTTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACATACAAGACTGGGGATTTTGGAG  50

seq1  GTCAGGACATGCATGTAGAGGTCAGAGCACAATTTCACAAAGTTCTCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGACATGCATGTAGAGGTCAGAGCACAATTTCACAAAGTTCTCTCC  100

seq1  TTCCAATTGTATGTGAATCTGGGTCTGTGAGTCAGACTCGGGTCATCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATTGTATGTGAATCTGGGTCTGTGAGTCAGACTCGGGTCATCAGG  150

seq1  TGTGCACATGGGCCGCCTTTACGGCTTGGACAGTCTTGTAGACTCTAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACATGGGCCGCCTTTACGGCTTGGACAGTCTTGTAGACTCTAGGA  200

seq1  CCTGTTGTTTAAGGTTTCTGCCAGGCCCCAGGACTTTATAGTACACACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGTTTAAGGTTTCTGCCAGGCCCCAGGACTTTATAGTACACACTC  250

seq1  TTGAAAACACCTAACTCCTTCCTGTGTCTACTCTCGTACTTCTAAGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAACACCTAACTCCTTCCTGTGTCTACTCTCGTACTTCTAAGAAGA  300

seq1  AACTTGCTGCTGAAATGATTAGTATCTGACTCTATTGCTTTCACAGGCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCTGCTGAAATGATTAGTATCTGACTCTATTGCTTTCACAGGCCG  350

seq1  CATGAGTATTTTAAGGACATGCAAATTGTCCTGGATTTGATGTAAAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTATTTTAAGGACATGCAAATTGTCCTGGATTTGATGTAAAAAGT  400

seq1  GTATGGATCGTCACTGATCCGCAGTGTCTGCCAATGTCTTTACATAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGATCGTCACTGATCCGCAGTGTCTGCCAATGTCTTTACATAATCA  450

seq1  TTTTTATTTTAAAGACTTCAGAAAACCACAGAACTTACAAGGGGCTGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTTTAAAGACTTCAGAAAACCACAGAACTTACAAGGGGCTGAGC  500

seq1  TGATATTTGATTCAAGAGAGACCCTCTTCTCTCTCAAAAGTTTGGATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTTGATTCAAGAGAGACCCTCTTCTCTCTCAAAAGTTTGGATTTT  550

seq1  AGCTTCAACATGCACACTGGTTTGGAATTC  580
      ||||||||||||||||||||||||||||||
seq2  AGCTTCAACATGCACACTGGTTTGGAATTC  580