BAC Information

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BAC

Clone NameB6Ng01-015O19
Chromosome10 (Build37)
Map Location 100,232,084 - 100,233,130
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015O19.bB6Ng01-015O19.g
ACCDH850048DH850049
length9371,043
definitionDH850048|Mus musculus domesticus DNA, BAC clone: B6Ng01-015O19, 5' end.DH850049|Mus musculus domesticus DNA, BAC clone: B6Ng01-015O19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttgcctctgtaccccatttttaatagggttttttggtta
tcttgagtccaacttctgagttcctcatatatattggatattagccctct
atcagatataggattggtaaagatcttttcccaatctgttggttgccagt
gtcttactgtctaattgacagtgtcctttgccgtacagaagccttgagat
tttatgacgtcctatttgtctattcttaatcttacagcacactattgctg
ttctgttcaggaatcttttttctgtgcccacatcttcaaggctcttcccc
attttctcctaagtgaggtaacccaatcacaaaagaacacacatgatagg
cacttactgataagtggatattagcccagacactcagaatccttcttaga
agggggaacaaaatacccatggaaggagttacagagacaaaagttcagag
cagagactaaaggaacgaccatccagagactgccctacttggggatctat
cccataaacaatcaccaaacacagatactattgcagatgccaacaagagt
ttcctgacaggagcctgatgtagctgtctcctgagaggctctgccagtgc
ctggcaaacacagaagaggatgctcacagtcattcattggatggagcaca
gggtccctaatgaaggagctagagaaagtacccaaggagctgaacgggtt
tgcagactcataggaggaacatcaatatgaactaaccagtaacacccaga
gcttcctgggactaaaacatcaatcaaagaaaacacatggtgggacttgt
ggctctagctgcatatatagcacaggatgggcctagttggtcatcactca
gatgggaggagaggccctagctcctgtgaagttttagccccagtacaggg
gaatgccagaccagatggttgtgggtgggttggggat
gaattcaatagcattgatgttagatatttaataaagtatatattaatttc
ttctggcttttgggttatccttactacattcccatgagcaactaattatt
tatgatatttttaaagtgtggaaataggttctcagcaaggtaatctgatg
aaggatggaaggaaataatcattttatagtgttatcttcgattaagcttc
agctagcacaaacaaaacagtttggagagctatcttcagagactactaat
aaatataattatttttattttctcttcccttgaattttaagattttcctg
aaacttcacactgtagagaatagtttctatccttgctttttgttgtttgt
tttgtttttatattgatttgtttgttttgtgactacttctccactaaggg
gtatataagattctcaaaaatattttatttatcatctcttacatttaatc
aaaaagtttctacacatataggttttaaggtcaaaaatcatttttattac
catttaacacaacaatcactaccatcagtatcttttaggctaagagacta
tagtgttgatcactcttaatcttcagggttctcctcattagtggatgtaa
gaaacaaaaaagtgatactctcaagtaaatagtacacagatgtaggacat
gagagtctagggcaaaacagttaagtataagccataaatacaaggtaagt
gcaatttaaaaggtaaacttttacatcttgaaattataatatagttacat
ggtttcaccttcccctttcactcctctaatctctcttatcaccacctgct
ctttcaaattaatgcttttaaaattaaatgcattaaattagtatcgtttt
ctttaattgatgttacacacacacacatacacacaccataatattgacac
atttacgaaaaacctagactacagtagctacacactagacctcatatagt
ggaataaaagaaagagagctggtgagaaaagctcagtgggttacaccact
tctgctcttacagaggaactcctgtggttgactctcagcataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_100232084_100233130
seq2: B6Ng01-015O19.g_70_1112

seq1  GAATTCAATAGCATTGATGTTAGATATTTAATAAAGTATATATTAATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAGCATTGATGTTAGATATTTAATAAAGTATATATTAATTTC  50

seq1  TTCTGGCTTTTGGGTTATCCTTACTACATTCCCATGAGCAACTAATTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGCTTTTGGGTTATCCTTACTACATTCCCATGAGCAACTAATTATT  100

seq1  TATGATATTTTTAAAGTGTGGAAATAGGTTCTCAGCAAGGTAATCTGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATATTTTTAAAGTGTGGAAATAGGTTCTCAGCAAGGTAATCTGATG  150

seq1  AAGGATGGAAGGAAATAATCATTTTATAGTGTTATCTTCGATTAAGCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGGAAGGAAATAATCATTTTATAGTGTTATCTTCGATTAAGCTTC  200

seq1  AGCTAGCACAAACAAAACAGTTTGGAGAGCTATCTTCAGAGACTACTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGCACAAACAAAACAGTTTGGAGAGCTATCTTCAGAGACTACTAAT  250

seq1  AAATATAATTATTTTTATTTTCTCTTCCCTTGAATTTTAAGATTTTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAATTATTTTTATTTTCTCTTCCCTTGAATTTTAAGATTTTCCTG  300

seq1  AAACTTCACACTGTAGAGAATAGTTTCTATCCTTGCTTTTTGTTGTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCACACTGTAGAGAATAGTTTCTATCCTTGCTTTTTGTTGTTTGT  350

seq1  TTTGTTTTTATATTGATTTGTTTGTTTTGTGACTACTTCTCCACTAAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTATATTGATTTGTTTGTTTTGTGACTACTTCTCCACTAAGGG  400

seq1  GTATATAAGATTCTCAAAAATATTTTATTTATCATCTCTTACATTTAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATAAGATTCTCAAAAATATTTTATTTATCATCTCTTACATTTAATC  450

seq1  AAAAAGTTTCTACACATATAGGTTTTAAGGTCAAAAATCATTTTTATTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTTTCTACACATATAGGTTTTAAGGTCAAAAATCATTTTTATTAC  500

seq1  CATTTAACACAACAATCACTACCATCAGTATCTTTTAGGCTAAGAGACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAACACAACAATCACTACCATCAGTATCTTTTAGGCTAAGAGACTA  550

seq1  TAGTGTTGATCACTCTTAATCTTCAGGGTTCTCCTCATTAGTGGATGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTGATCACTCTTAATCTTCAGGGTTCTCCTCATTAGTGGATGTAA  600

seq1  GAAACAAAAAAGTGATACTCTCAAGTAAATAGTACACAGATGTAGGACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAAAAAGTGATACTCTCAAGTAAATAGTACACAGATGTAGGACAT  650

seq1  GAGAGTCTAGGGCAAAACAGTTAAGTATAAGCCATAAATACAAGGTAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTCTAGGGCAAAACAGTTAAGTATAAGCCATAAATACAAGGTAAGT  700

seq1  GCAATTTAAAAGGTAAACTTTTACATCTTGAAATTATAATATAGTTACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTAAAAGGTAAACTTTTACATCTTGAAATTATAATATAGTTACAT  750

seq1  GGTTTCACCTTCCCCTTTCACTCCTCTAATCTCTCTTATCACCACCTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCACCTTCCCCTTTCACTCCTCTAATCTCTCTTATCACCACCTGCT  800

seq1  CTTTCAAATTAATGCTTTTAAAATTAAATGCATTAAAATTAGTATCGTTT  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTTCAAATTAATGCTTTTAAAATTAAATGCATT-AAATTAGTATCGTTT  849

seq1  TCTTTAATTGATGTTACACACACACACATACACACACCATAATATTGACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAATTGATGTTACACACACACACATACACACACCATAATATTGACA  899

seq1  CATTTACGAAAAACCTAGACTACAGTAGCTACACACTAGACCTCAATATA  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CATTTACGAAAAACCTAGACTACAGTAGCTACACACTAGACCTC-ATATA  948

seq1  GTGGAATAAAAGATAGGAAGAAGGCTGGTGAG-ACAGCTCAGT-GGTTAC  998
      |||||||||||||    ||||  ||||||||| | |||||||| ||||||
seq2  GTGGAATAAAAGA----AAGAGAGCTGGTGAGAAAAGCTCAGTGGGTTAC  994

seq1  AACCACTTCCTGCTCTTACAGA-GAACTCCTGT-GTTGACTCCCAGCATA  1046
       ||||||| ||||||||||||| |||||||||| |||||||| |||||||
seq2  -ACCACTT-CTGCTCTTACAGAGGAACTCCTGTGGTTGACTCTCAGCATA  1042

seq1  A  1047
      |
seq2  A  1043