BAC Information

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BAC

Clone NameB6Ng01-016A15
Chromosome10 (Build37)
Map Location 35,148,501 - 35,149,309
singlet/doubletsinglet
Overlap genenone
Upstream geneFrk, LOC667824
Downstream geneLOC100041585, LOC667860
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016A15.bB6Ng01-016A15.g
ACCDH850130DH850131
length1,2371,129
definitionDH850130|Mus musculus domesticus DNA, BAC clone: B6Ng01-016A15, 5' end.DH850131|Mus musculus domesticus DNA, BAC clone: B6Ng01-016A15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattcattatcttctgggctccaaagcactctgggaatttgactt
ctctagttttgccatgggcatcacatagcatctctcttaggctcaagcca
cctcgactccatatctgatgctatccttagcaattatcccatgctagtag
aagctcttggggactccactaaaactgaggcttcaattctccaatgacta
cacataggtggttcagggactattcttctttccaatacccctttaatatc
attatctcctttaccatattacttcaccagtgctctctccttatctctca
tcacagagaatctgatcctgccacatagtctaaccttgagttgctttgca
taggcactcaatagtaccatttgagagattcttacacattaccatgttta
gctggaaccttgagatgtagtcttaagcctctgtgtaatgatactgaata
aattccaaaaggtttcattttaattatggtggttttataaaacagcactg
gttttttagccatctaacacaacccacaatttattaaatcaaaatatcat
ataacacccctgatacagctgttaaaagaatcaaagttcattctgaaatt
tcatgttagacccttattgtttgtatttctcctggcattatcttccatgt
accaataatagctcttaactttgttcactcaatgttctttatagttcaaa
gcatcaagttccttcaccttcattccacaaaactgcaagaaatatcgtga
ggcccatcagagaatcaattattattctagcttgttttccgtattgctgt
tataaaacagtaactcagagcaactaagaggaagggcttatttgaattac
aggctatagtatctcatttattaaaggcatgattaactaagaaatgcaaa
ggtaagaagtgaagcaatatccacagtgtcttgattctatgtaatattta
aataccgttcatatatagcccaagccaacttgcccaggaatgtactaccc
aaagaggctgatccccctcaatcaaatatcactcagaaaatgtcctacag
ctgctgtaaaagtatttcatgatgagttttcttcttcacagtatgtcaag
tccacatacataaattactgataacctgttttcgagaaagtgcttggcta
ctttgtgttagctattcgtctgcataacatgaacctgatttagaccaata
ggcataatagtgaaatatcactttatagagaaggcta
gaattcagtaagaatgttacctaatcagtaacattcaaatttacctctag
tagagacagtgaaattaattaggcattacaatttacttgaatggagctag
ggaagcttagggctagtctacatagtaattacttagaacaatagctgagt
cacacccatacacaggaatacacaatggcctaggaaatagttgggttgta
gtattattcatgaaagggttagtagaccagaattcccctggtgcatgttt
ttcactaggcccagaggaatagcataatcaggtatttactaaaggacccc
tggtggtgggtttaacaatagactagcattgcatcagagcattcacctgg
ctcctgagtttagtggatcttaattaaaggttgtggtggtgcacaccttt
aatcccagcacttaagaggcagaagcaggcagatctctgagttcgaggcc
agcctggtctacagagtgagttccaggacagccaggactacacagagata
ccctgtcttgaaaaaacaaacaaacaaacaaacaaatggaaaaagggttg
ttcctattctcatataaacatggcctggtttcccctagccttatgtatgc
attttctttgttttgtgttgatgtaacttggcagaggttttcgcctagct
ttcttgtttttcttctgtattaaaagtctgttgtattcttggaaaaaaat
acattcagatacagactcactctgtgcccatgtctgtttgtcacctgtgc
caactccttgctctcgcatgtaaccataaccccggatttcttccatggat
tgagagagccgactggggccagtctacggcacatgagaataaggaaattg
gtcttaaatgaagggaagcatgttgtctcttgtcattatataaaccagga
agcaatttaaggactgcttgactgaaactaaaaagacatggctcagttta
ggatacctcaactattgtctgattccaatatctttgagccatactatttt
aaaggtataagtctcaattgtgctatatgattgtatagagtttagttcct
ttgctcatgctctgataaaaggaccaaggaagtcagaattaggctttaat
cagctatcctctgcttcgctctgtggact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_35148501_35149309
seq2: B6Ng01-016A15.g_400_1192

seq1  GAGCATTCACCTGGCTCCTGAGTTTAGTGGATCTTAATTAAAGGTTGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATTCACCTGGCTCCTGAGTTTAGTGGATCTTAATTAAAGGTTGTGG  50

seq1  TGGTGCACACCTTTAATCCCAGCACTTAAGAGGCAGAAGCAGGCAGATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCACACCTTTAATCCCAGCACTTAAGAGGCAGAAGCAGGCAGATCT  100

seq1  CTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGG  150

seq1  ACTACACAGAGATACCCTGTCTTGAAAAAACAAACAAACAAACAAACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACACAGAGATACCCTGTCTTGAAAAAACAAACAAACAAACAAACAAA  200

seq1  TGGAAAAAGGGTTGTTCCTATTCTCATATAAACATGGCCTGGTTTCCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAGGGTTGTTCCTATTCTCATATAAACATGGCCTGGTTTCCCCT  250

seq1  AGCCTTATGTATGCATTTTCTTTGTTTTGTGTTGATGTAACTTGGCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTATGTATGCATTTTCTTTGTTTTGTGTTGATGTAACTTGGCAGAG  300

seq1  GTTTTCGCCTAGCTTTCTTGTTTTTCTTCTGTATTAAAAGTCTGTTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCGCCTAGCTTTCTTGTTTTTCTTCTGTATTAAAAGTCTGTTGTAT  350

seq1  TCTTGGAAAAAAATACATTCAGATACAGACTCACTCTGTGCCCATGTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAAAAAAATACATTCAGATACAGACTCACTCTGTGCCCATGTCTG  400

seq1  TTTGTCACCTGTGCCAACTCCTTGCTCTCGCATGTAACCATAACCCCGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACCTGTGCCAACTCCTTGCTCTCGCATGTAACCATAACCCCGGA  450

seq1  TTTCTTCCATGGATTGAGAGAAGCCGACTGGGGCCAGTCTACGGCACATG  500
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTCTTCCATGGATTGAGAG-AGCCGACTGGGGCCAGTCTACGGCACATG  499

seq1  AGAATAAGGAAATTGGTCTTAAATGAAGGGAAGCATGTTGTCTCTTGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAGGAAATTGGTCTTAAATGAAGGGAAGCATGTTGTCTCTTGTCA  549

seq1  TTATATAAACCAGGAAGCAATTTAAGGACTGCTTGACTGAAACTAAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAAACCAGGAAGCAATTTAAGGACTGCTTGACTGAAACTAAAAAG  599

seq1  ACATGGCCTCAGTTTAGGAATACCTCAACTATTGTTCTGATTCCAATATC  650
      |||||| ||||||||||| ||||||||||||||| |||||||||||||||
seq2  ACATGG-CTCAGTTTAGG-ATACCTCAACTATTG-TCTGATTCCAATATC  646

seq1  TTTGAGCCATACTATTTTAAAGGTATAAGTCTCAATTGTTGCTATATGAT  700
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTGAGCCATACTATTTTAAAGGTATAAGTCTCAATTG-TGCTATATGAT  695

seq1  TGTAATAGAGTTTATGTTCTTTGTCTCATTGCTCTTGAATAAAAGGACCA  750
      ||| |||||||||| |||| ||  |||| ||||||   ||||||||||||
seq2  TGT-ATAGAGTTTA-GTTCCTTTGCTCA-TGCTCT--GATAAAAGGACCA  740

seq1  TGG-AGTCAGATATAGTGCTTTAAATTCCAGCTATCCTCCTGCTTCTGCT  799
       || |||||||  ||| |||||||    |||||||||| ||||||| |||
seq2  AGGAAGTCAGAATTAG-GCTTTAA---TCAGCTATCCT-CTGCTTC-GCT  784

seq1  CCTGTGGACT  809
       |||||||||
seq2  -CTGTGGACT  793