BAC Information

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BAC

Clone NameB6Ng01-016D23
Chromosome10 (Build37)
Map Location 123,994,712 - 124,094,020
singlet/doubletdoublet
Overlap genenone
Upstream geneAI851790, 4930503E24Rik
Downstream geneLOC671416, Slc16a7, LOC100042987, EG668313, LOC100042992, LOC668317, LOC100042994
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016D23.bB6Ng01-016D23.g
ACCDH850268DH850269
length1,193808
definitionDH850268|Mus musculus domesticus DNA, BAC clone: B6Ng01-016D23, 5' end.DH850269|Mus musculus domesticus DNA, BAC clone: B6Ng01-016D23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,092,791 - 124,094,020)(123,994,712 - 123,995,301)
sequence
gaattccccaaggacttcttccatctctcatctgtagatagcactgctat
ttggggcccagatggacatcaatgatctggcagccactgcctcagcacat
aaaaattcccctactgggactgagattggatcagttctcagcatataatt
ccaatttcctttgaacaatcctacactgtaaagactaggaagctgatgaa
gcactcatggattcatgggaagacaacaccaaatcaaccagaactaacaa
gttctgtatataaatcatgcctcacaattccagcactgagaaaacctaca
gagttcataattcatcaatttgtcccttagttgtgacaaatggtacacgg
taatattggatattaaccttaggggacaatgtgtaagggatacataaaga
tttttgtactatgttgataacttttccataaatttaaattttaacagaat
gtaaaggttatttgggccgaaggatgtagctcaaggtgtgcagcagttcc
tgagttcaattcccagctctacaaaatgatgctaaaaccttaaatcttct
ttaaagttggtttttgtaggcacagctctagttttcactcagacacacac
aaatggatcacactaaaggatgatggctggctctctgctccaggtacact
cacttgccccgctgaccaaagaagaaaccagtgcagagacatgtgtgcca
gatacttccttcgtagtttacttacactaaaaattatcaattataattgt
acattttcatagggcagagaatgccataatttgtgaatataacatggaat
gattaaatcaaagtgattaacatatgaattacttaatgttcttatcttct
ctttgtaaatgcactaccgttggcaccttttaaaacttctatgtctttaa
aagaaaacaaatattgtttcatagaaagtagtggtttatttttttatttt
tactctttaaattttttttttttttacaatccagacttaatccttccttc
aatccaccttccactgtttacatcccacacctctccgacccctgcttcac
catcttcagagatgccccaccccacccccatctatagacctgctcactct
ggggcccagcatctcaagttagtgcatctctcatgactgaatcccgaact
gatcgcgttcctctaatgggttgggagcctcgatactacctgg
gaattccattctgtatcataggcctcaaatctatttaaggtcatacttga
tttccttgcataaatcatcttgtaactatgtaatactgtcatgcatttta
atccaacaacattgctacctggcaaacagcgtggcaagaaatcacatcca
gagaccttctgagatctggctggaatagcacacctttagtaccactggct
ggaatacagactggccttagtatgtacctttagtccctaacaatggaggt
aaattgtgtttgttgaaaaaaatgcagtcatgtttgaaagtgacttttaa
ttgagggacagataatgtgatgagtcagaaaaatatttgacagaatgagt
cagagataggatatgcccaactctctggagaagagacaggatagaaaaga
tgttggaaagagcagcagaagcagcagcaggagacacacacacacacaca
cacagagagagagagagagaggagagagagagagagagagagagagagag
agagagagagagagagagagagagagagaataatctgagtggagccattt
ttatcaggacaggtttacagaggcaggtcacaggggaagacagaaaagtc
gaaccaattgctgaagttagcttcaaaccaagcagaagatttcagtgaga
agctgagagacaccagtttcaatcattcagaatgaagaggagttttgaat
aagaacacctgacttgaaccagccagccagagttcagaaagaactggaaa
gaatgatcatattaagcagtaaatcctctagaaacaattatatctgatga
gcaaagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_124092791_124094020
seq2: B6Ng01-016D23.b_45_1237 (reverse)

seq1  CCAGGTAGCATATACCAGATGATACGAGGCTCCCAACACATATATAGAAG  50
      |||||||| ||             ||||||||||||| |||   ||||  
seq2  CCAGGTAGTAT-------------CGAGGCTCCCAACCCAT---TAGA--  32

seq1  AGAACTGCCGGGTCTGGTCTGGATTCAGTCATAGAAGATGCACTTAACCT  100
       |||| ||  | || | || ||||||||||||   |||||||| ||||  
seq2  GGAAC-GC--GATCAGTTCGGGATTCAGTCATGAGAGATGCAC-TAAC--  76

seq1  TTGAGATGCTGGAGCCCCAGGAAGTGAGCAAGTCTATTAGGATGGGGGTG  150
      |||||||||||| |||||||  |||||||| ||||||   ||||||||||
seq2  TTGAGATGCTGG-GCCCCAG--AGTGAGCAGGTCTAT--AGATGGGGGTG  121

seq1  GGGTGGGGGCATCCTCTTGGAGATGGTGGAGCAGGGGTCGGGAGAGGTGT  200
      |||| ||||||| ||| || |||||||| |||||||||| ||||||||||
seq2  GGGT-GGGGCAT-CTC-TGAAGATGGTGAAGCAGGGGTC-GGAGAGGTGT  167

seq1  GGGATGTGAAACAGTTGGAGGGTGGATTTGGAGG-AGGATTAAGTCTGGA  249
      ||||||| |||||| |||| |||||| ||| ||| |||||||||||||||
seq2  GGGATGT-AAACAG-TGGAAGGTGGA-TTGAAGGAAGGATTAAGTCTGGA  214

seq1  TTGTAAAAAAAAAAAAAAATTTAAAGAGTAAAAATAAAAAAATAAAACCA  299
      |||| |||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTGT-AAAAAAAAAAAAAATTTAAAGAGTAAAAATAAAAAAAT-AAACCA  262

seq1  CTACTTTCTATGAAACAATATTTGTTTTCTTTTAAAGACATAGAAGTTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTCTATGAAACAATATTTGTTTTCTTTTAAAGACATAGAAGTTTT  312

seq1  AAAAGGTGCCAACGGTAGTGCATTTACAAAGAGAAGATAAGAACATTAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTGCCAACGGTAGTGCATTTACAAAGAGAAGATAAGAACATTAAG  362

seq1  TAATTCATATGTTAATCACTTTGATTTAATCATTCCATGTTATATTCACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCATATGTTAATCACTTTGATTTAATCATTCCATGTTATATTCACA  412

seq1  AATTATGGCATTCTCTGCCCTATGAAAATGTACAATTATAATTGATAATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGGCATTCTCTGCCCTATGAAAATGTACAATTATAATTGATAATT  462

seq1  TTTAGTGTAAGTAAACTACGAAGGAAGTATCTGGCACACATGTCTCTGCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGTAAGTAAACTACGAAGGAAGTATCTGGCACACATGTCTCTGCA  512

seq1  CTGGTTTCTTCTTTGGTCAGCGGGGCAAGTGAGTGTACCTGGAGCAGAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTCTTCTTTGGTCAGCGGGGCAAGTGAGTGTACCTGGAGCAGAGA  562

seq1  GCCAGCCATCATCCTTTAGTGTGATCCATTTGTGTGTGTCTGAGTGAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCATCATCCTTTAGTGTGATCCATTTGTGTGTGTCTGAGTGAAAA  612

seq1  CTAGAGCTGTGCCTACAAAAACCAACTTTAAAGAAGATTTAAGGTTTTAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCTGTGCCTACAAAAACCAACTTTAAAGAAGATTTAAGGTTTTAG  662

seq1  CATCATTTTGTAGAGCTGGGAATTGAACTCAGGAACTGCTGCACACCTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTTTGTAGAGCTGGGAATTGAACTCAGGAACTGCTGCACACCTTG  712

seq1  AGCTACATCCTTCGGCCCAAATAACCTTTACATTCTGTTAAAATTTAAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACATCCTTCGGCCCAAATAACCTTTACATTCTGTTAAAATTTAAAT  762

seq1  TTATGGAAAAGTTATCAACATAGTACAAAAATCTTTATGTATCCCTTACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGAAAAGTTATCAACATAGTACAAAAATCTTTATGTATCCCTTACA  812

seq1  CATTGTCCCCTAAGGTTAATATCCAATATTACCGTGTACCATTTGTCACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCCCCTAAGGTTAATATCCAATATTACCGTGTACCATTTGTCACA  862

seq1  ACTAAGGGACAAATTGATGAATTATGAACTCTGTAGGTTTTCTCAGTGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGGACAAATTGATGAATTATGAACTCTGTAGGTTTTCTCAGTGCT  912

seq1  GGAATTGTGAGGCATGATTTATATACAGAACTTGTTAGTTCTGGTTGATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGTGAGGCATGATTTATATACAGAACTTGTTAGTTCTGGTTGATT  962

seq1  TGGTGTTGTCTTCCCATGAATCCATGAGTGCTTCATCAGCTTCCTAGTCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTGTCTTCCCATGAATCCATGAGTGCTTCATCAGCTTCCTAGTCT  1012

seq1  TTACAGTGTAGGATTGTTCAAAGGAAATTGGAATTATATGCTGAGAACTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTGTAGGATTGTTCAAAGGAAATTGGAATTATATGCTGAGAACTG  1062

seq1  ATCCAATCTCAGTCCCAGTAGGGGAATTTTTATGTGCTGAGGCAGTGGCT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATCTCAGTCCCAGTAGGGGAATTTTTATGTGCTGAGGCAGTGGCT  1112

seq1  GCCAGATCATTGATGTCCATCTGGGCCCCAAATAGCAGTGCTATCTACAG  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGATCATTGATGTCCATCTGGGCCCCAAATAGCAGTGCTATCTACAG  1162

seq1  ATGAGAGATGGAAGAAGTCCTTGGGGAATTC  1230
      |||||||||||||||||||||||||||||||
seq2  ATGAGAGATGGAAGAAGTCCTTGGGGAATTC  1193

seq1: chr10_123994712_123995301
seq2: B6Ng01-016D23.g_67_656

seq1  GAATTCCATTCTGTATCATAGGCCTCAAATCTATTTAAGGTCATACTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCTGTATCATAGGCCTCAAATCTATTTAAGGTCATACTTGA  50

seq1  TTTCCTTGCATAAATCATCTTGTAACTATGTAATACTGTCATGCATTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTGCATAAATCATCTTGTAACTATGTAATACTGTCATGCATTTTA  100

seq1  ATCCAACAACATTGCTACCTGGCAAACAGCGTGGCAAGAAATCACATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAACAACATTGCTACCTGGCAAACAGCGTGGCAAGAAATCACATCCA  150

seq1  GAGACCTTCTGAGATCTGGCTGGAATAGCACACCTTTAGTACCACTGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTTCTGAGATCTGGCTGGAATAGCACACCTTTAGTACCACTGGCT  200

seq1  GGAATACAGACTGGCCTTAGTATGTACCTTTAGTCCCTAACAATGGAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATACAGACTGGCCTTAGTATGTACCTTTAGTCCCTAACAATGGAGGT  250

seq1  AAATTGTGTTTGTTGAAAAAAATGCAGTCATGTTTGAAAGTGACTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTGTTTGTTGAAAAAAATGCAGTCATGTTTGAAAGTGACTTTTAA  300

seq1  TTGAGGGACAGATAATGTGATGAGTCAGAAAAATATTTGACAGAATGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGACAGATAATGTGATGAGTCAGAAAAATATTTGACAGAATGAGT  350

seq1  CAGAGATAGGATATGCCCAACTCTCTGGAGAAGAGACAGGATAGAAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATAGGATATGCCCAACTCTCTGGAGAAGAGACAGGATAGAAAAGA  400

seq1  TGTTGGAAAGAGCAGCAGAAGCAGCAGCAGGAGACACACACACACACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGAAAGAGCAGCAGAAGCAGCAGCAGGAGACACACACACACACACA  450

seq1  CACAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  500

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAATAATCTGAGTGGAGCCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAATAATCTGAGTGGAGCCATTT  550

seq1  TTATCAGGACAGGTTTACAGAGGCAGGTCACAGGGGAAGA  590
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGGACAGGTTTACAGAGGCAGGTCACAGGGGAAGA  590