BAC Information

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BAC

Clone NameB6Ng01-016F23
Chromosome10 (Build37)
Map Location 72,039,425 - 72,153,496
singlet/doubletdoublet
Overlap geneZwint
Upstream geneLOC216081, EG216082, LOC622812, EG327767, 1700049L16Rik, LOC100040505
Downstream geneLOC432471, LOC544705, LOC100039981, LOC623191
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016F23.bB6Ng01-016F23.g
ACCDH850350DH850351
length615408
definitionDH850350|Mus musculus domesticus DNA, BAC clone: B6Ng01-016F23, 5' end.DH850351|Mus musculus domesticus DNA, BAC clone: B6Ng01-016F23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,039,425 - 72,040,041)(72,153,083 - 72,153,496)
sequence
gaattctctctctgtcgtatttactctttggcttgcttatgctctctctt
taatacacagacccacgtggcttctgtcttctccaacattctttttcctc
tggttctcaaagtcaacagaatctctctctctctctctttctctcttcct
ctctctctctctctctctctctctctctctcttcctctctctctctctct
ctgtctctctcctacacaaacgcaaatgtgtgatgatgagtctcatagct
ttgtttcccctcactctgcctcttgcttcttggggttttatttttttatg
aaaataccttatcttttaggcattgtgacggggagtgttaaagaaacaat
aaaattttaaataagacaatgttatatgttttaattgacagttcgctctt
cttcaacagatacatctctctcaatttttcccccctccctccatccctcc
ttctgaccccccatctttcgagatccctgtagaatgttctcctgttcaga
agagcaggccatatgagacatccaacacaacatatctataatgaatatga
tgaggctgagggacccaggtagacgctagacaagacatttcaacgggagg
ggatgcatctcaaga
tctgtttatctctgtactccatttttaattgggttatttggttttctgga
gtctaagttcttgagttctttgtatatttttgataaagatcttttgaaaa
tatgaatgatttgactagttctttgtatattttggataaagatcacttct
tcctcaggtccctcaaaggaagcaccctcgctgcctcagagcactcttgt
ttgatgtagcaaatagaagctcagggaagaaagcatatagctccttctga
tcatgtagtatttgtcctcaaatcgtttaaaattcctcctctgtaaatgt
aattatattatttccaagttttaagtcctatcataaacatcattttgttg
ttttcactgtgttctttactaaaataaaatttgaggagaagctgggggag
gagtgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_72039425_72040041
seq2: B6Ng01-016F23.b_45_659

seq1  GAATTCTCTCTCTGTCGTATTTACTCTTTGGCTTGCTTATGCTCTCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCTGTCGTATTTACTCTTTGGCTTGCTTATGCTCTCTCTT  50

seq1  TAATACACAGACCCACGTGGCTTCTGTCTTCTCCAACATTCTTTTTCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACACAGACCCACGTGGCTTCTGTCTTCTCCAACATTCTTTTTCCTC  100

seq1  TGGTTCTCAAAGTCAACAGAATCTCTCTCTCTCTCTCTTTCTCTCTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTCAAAGTCAACAGAATCTCTCTCTCTCTCTCTTTCTCTCTTCCT  150

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCTCTCTCTCTCTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCTCTCTCTCTCTCTCT  200

seq1  CTCTCTCTCTCTCACACACACACACACACATGAATTAAT--ATTTCAT--  246
      || ||||||||  ||||| || || |    |||  | ||   | ||||  
seq2  CTGTCTCTCTCCTACACAAACGCAAATGTGTGA--TGATGAGTCTCATAG  248

seq1  -TTTATT----GTAAAAAT-TCTCTT--TTCAGAAAATGTAGTAGTCTAA  288
       ||| ||     | |   |  |||||  |||        | |  || | |
seq2  CTTTGTTTCCCCTCACTCTGCCTCTTGCTTC--------TTGGGGTTTTA  290

seq1  ACATTTACAATGAAACATCCCTTATCTTTTAGGCATTTAGACTAAAATTG  338
         |||   |||||| || ||||||||||||||||||  |||    | ||
seq2  --TTTTTTTATGAAA-ATACCTTATCTTTTAGGCATTGTGACGGGGAGTG  337

seq1  TAAAAAAAAAAAATTTTTTTTTCATATTACCAATGTTTTACTTTTTAATT  388
      | ||| ||| ||     ||||  |||  | ||||||| ||  ||||||||
seq2  TTAAAGAAACAATAAAATTTTAAATAAGA-CAATGTTATATGTTTTAATT  386

seq1  GAAAATACGTTCTTCTTCATATGATACACCCTAATCAAATTTTCCCTCCT  438
      || | | || |||||||||   |||||| |    |||| ||||||| |||
seq2  GACAGTTCGCTCTTCTTCAACAGATACATCTCTCTCAATTTTTCCCCCCT  436

seq1  CCCTCCATCCCTCCTACCTTCCCCCCAACCTCCACTATCCCCCCAGATTG  488
      ||||||||||||||| |   ||||||| | | |   |||||   ||| ||
seq2  CCCTCCATCCCTCCTTCTGACCCCCCATCTTTCGAGATCCCTGTAGAATG  486

seq1  ATTTCCTCTTCAGAAGAGCAGGCCATAAGAGACAGCCAACAGAACAAATC  538
       | |||| ||||||||||||||||||| |||||| |||||| |||| |||
seq2  TTCTCCTGTTCAGAAGAGCAGGCCATATGAGACATCCAACACAACATATC  536

seq1  AAGATTGAATATGACAAGGCTGAGGGCCTCAGGTAGAGGCTGGACAAGGC  588
       | | |||||||||  |||||||||| | |||||||| ||| |||||| |
seq2  TATAATGAATATGATGAGGCTGAGGGACCCAGGTAGACGCTAGACAAGAC  586

seq1  AATTCAACAGGAGGGGAAGCATCTCAAGA  617
      | |||||| |||||||| |||||||||||
seq2  ATTTCAACGGGAGGGGATGCATCTCAAGA  615

seq1: chr10_72153083_72153496
seq2: B6Ng01-016F23.g_68_481 (reverse)

seq1  CCTCACTCCTCCCCCAGCTTCTCCTCAAATTTTATTTTAGTAAAGAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTCCTCCCCCAGCTTCTCCTCAAATTTTATTTTAGTAAAGAACAC  50

seq1  AGTGAAAACAACAAAATGATGTTTATGATAGGACTTAAAACTTGGAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAAACAACAAAATGATGTTTATGATAGGACTTAAAACTTGGAAATA  100

seq1  ATATAATTACATTTACAGAGGAGGAATTTTAAACGATTTGAGGACAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTACATTTACAGAGGAGGAATTTTAAACGATTTGAGGACAAATA  150

seq1  CTACATGATCAGAAGGAGCTATATGCTTTCTTCCCTGAGCTTCTATTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGATCAGAAGGAGCTATATGCTTTCTTCCCTGAGCTTCTATTTGC  200

seq1  TACATCAAACAAGAGTGCTCTGAGGCAGCGAGGGTGCTTCCTTTGAGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCAAACAAGAGTGCTCTGAGGCAGCGAGGGTGCTTCCTTTGAGGGA  250

seq1  CCTGAGGAAGAAGTGATCTTTATCCAAAATATACAAAGAACTAGTCAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGAAGAAGTGATCTTTATCCAAAATATACAAAGAACTAGTCAAAT  300

seq1  CATTCATATTTTCAAAAGATCTTTATCAAAAATATACAAAGAACTCAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATATTTTCAAAAGATCTTTATCAAAAATATACAAAGAACTCAAGA  350

seq1  ACTTAGACTCCAGAAAACCAAATAACCCAATTAAAAATGGAGTACAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGACTCCAGAAAACCAAATAACCCAATTAAAAATGGAGTACAGAGA  400

seq1  TAAACAGAGAATTC  414
      ||||||||||||||
seq2  TAAACAGAGAATTC  414