BAC Information

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BAC

Clone NameB6Ng01-016H12
Chromosome10 (Build37)
Map Location 118,683,414 - 118,684,281
singlet/doubletsinglet
Overlap geneCand1
Upstream geneLOC668187, LOC668191, EG668193, Iltifb, LOC668198, EG668203, EG668205, EG668209, EG668213, LOC668216, Ifng, LOC100043478, LOC100042850, Dyrk2, LOC668223, LOC100042861, LOC674417
Downstream geneGrip1, Helb, Irak3, Tmbim4, 1190005P17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016H12.bB6Ng01-016H12.g
ACCDH850422DH850423
length1,017869
definitionDH850422|Mus musculus domesticus DNA, BAC clone: B6Ng01-016H12, 5' end.DH850423|Mus musculus domesticus DNA, BAC clone: B6Ng01-016H12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctaggatcattattcactatgttgattttatcggaaagctgt
ttcttgaagtaggaaacgaatcctgctgaagtgaactcactattcttgtt
gttgttactgtagtaattctcgcaaagctacactacacgaatggatgata
tatggaccctgacctgagactgcatcattatgtataaaccccatgtaggc
aatagagtccttgtagaacaatatcacgtattgcattaaattaatgctgt
tcgtttgaattttaatggttttgcctttctgttggtgtttaattcgtaaa
ttgctttggctttgtggtttgataagaactgtaaacacatattcctttct
gattcacatgaaaaatgtgagtgtttgctttatagtataatggaataacg
taatagagcaagtagaaaagataccactgtgagacggtccgtccctttag
aggaagaacgtacattattccagctcaaaacagctcccagagcaggcacc
tctctcaggagtgcaaacagttccagtctttgaaggaggaaaggccttga
gtggaagtttgactacagtgagaaggaacagaataacgctgtcatggaca
gaaaatgtataacactacagcacgcctgtggttttaagggaaaatcggcc
cgtttaacgttgtcttccccaggtttcctccttccaatggaactttaaag
aacctaaatcccctattaaaaaatctgggtggaaccccgccataaagggg
cttttcacccccctggacaaagaaaacgaattttttttggaagaaaattt
cttttttcctatgggggtatagagggaaaaaatggccccctcacaggggg
ggtataaagaggggtctgtgccccccctataaaggaaagaaaacacaaaa
gatttcgaaaaaatctcctgagaaactccccccctattagaaagagcccc
gcgtgggtagtaataatgaagagcgcggcgctcacctctggtgtatatac
tctacgctctctctgtg
gaattctgatgggtaggagatccttggaagaaaattaatccaaaatatat
ttttaaacataatcttctaccaagtaaatttggttgtcatgatttcctac
atttgttgtgaattgagttaaagaaaagagagctctatttattaaagtag
ttattaatttcctagataagaggatgtctctctgattgccaaagcagatg
ggttaagagaggaagaaaagggcaattttgatttgtgttcgggagcagac
agcttcacactcaaatagacacaagtgcttcctgttatggatcattcacc
aatagtgaattcaccctagatgtcaaaagaagcaaaggtatttaagacta
gcggtcaagatttatttcaaacggatgggaaacaacccaacagctagttt
ttcctatgatctattctctaccaaacaactgctagaagctcttggttaat
ttctagtggtcctctaaatcaaatgtaattgctattctctgaaggaatta
ttctcgaggatgtggaaatatatttgcggcatattagtggaaactacaga
ggttatttatgtccttaaggggctccctcaaatacctatcattccaacgt
tgtgtgtgacttttatgtcaggattagcgataaaggaaacggcatacatt
cctgttatgaattactaagagagttcttctaggatgcttagggcaaatac
aattaagactgtacacatgtccggcttgtcattgctttggacacaaggac
acagaagatctgctagaatccagcacatgtgagggttttcttcaaccata
gatactgtgtggatgatgccccatcctgttgtttaaaatatattctttct
gcctggagaaagtggctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_118683414_118684281
seq2: B6Ng01-016H12.g_68_936

seq1  GAATTCTGATGGGTAGGAGATCCTTGGAAGAAAATTAATCCAAAATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATGGGTAGGAGATCCTTGGAAGAAAATTAATCCAAAATATAT  50

seq1  TTTTAAACATAATCTTCTACCAAGTAAATTTGGTTGTCATGATTTCCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAACATAATCTTCTACCAAGTAAATTTGGTTGTCATGATTTCCTAC  100

seq1  ATTTGTTGTGAATTGAGTTAAAGAAAAGAGAGCTCTATTTATTAAAGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTGTGAATTGAGTTAAAGAAAAGAGAGCTCTATTTATTAAAGTAG  150

seq1  TTATTAATTTCCTAGATAAGAGGATGTCTCTCTGATTGCCAAAGCAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATTTCCTAGATAAGAGGATGTCTCTCTGATTGCCAAAGCAGATG  200

seq1  GGTTAAGAGAGGAAGAAAAGGGCAATTTTGATTTGTGTTCGGGAGCAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAGAGAGGAAGAAAAGGGCAATTTTGATTTGTGTTCGGGAGCAGAC  250

seq1  AGCTTCACACTCAAATAGACACAAGTGCTTCCTGTTATGGATCATTCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCACACTCAAATAGACACAAGTGCTTCCTGTTATGGATCATTCACC  300

seq1  AATAGTGAATTCACCCTAGATGTCAAAAGAAGCAAAGGTATTTAAGACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGAATTCACCCTAGATGTCAAAAGAAGCAAAGGTATTTAAGACTA  350

seq1  GCGGTCAAGATTTATTTCAAACGGATGGGAAACAACCCAACAGCTAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTCAAGATTTATTTCAAACGGATGGGAAACAACCCAACAGCTAGTTT  400

seq1  TTCCTATGATCTATTCTCTACCAAACAACTGCTAGAAGCTCTTGGTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATGATCTATTCTCTACCAAACAACTGCTAGAAGCTCTTGGTTAAT  450

seq1  TTCTAGTGGTCCTCTAAATCAAATGTAATTGCTATTCTCTGAAGGAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTGGTCCTCTAAATCAAATGTAATTGCTATTCTCTGAAGGAATTA  500

seq1  TTCTCGAGGATGTGGAAATATATTTGCGGCATATTAGTGGAAACTACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGAGGATGTGGAAATATATTTGCGGCATATTAGTGGAAACTACAGA  550

seq1  GGTTATTTATGTCCTTAAGGGGCTCCCTCAAATACCTATCATTCCAACGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTTATGTCCTTAAGGGGCTCCCTCAAATACCTATCATTCCAACGT  600

seq1  TGTGTGTGACTTTTATGTCAGGATTAGCGATAAAGGAAACGGCATACATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGACTTTTATGTCAGGATTAGCGATAAAGGAAACGGCATACATT  650

seq1  CCTGTTATGAATTACTAAGAGAGTTCTTCTAGGATGCTTAGGGCAAATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTATGAATTACTAAGAGAGTTCTTCTAGGATGCTTAGGGCAAATAC  700

seq1  AATTAAGACTGTACACATGTCCGGCTTGTCATTGCTTTGGACACAAGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGACTGTACACATGTCCGGCTTGTCATTGCTTTGGACACAAGGAC  750

seq1  ACAGAAGATCTGCTAGAATCCAGCACATGTGAGGGTTTTCTTCAACCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGATCTGCTAGAATCCAGCACATGTGAGGGTTTTCTTCAACCATA  800

seq1  GATACTGTGTGGATGATGCCCCATCCTGTTGTTTAAAAATATATTC-TTC  849
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  GATACTGTGTGGATGATGCCCCATCCTGTTGTTT-AAAATATATTCTTTC  849

seq1  TGCCTGGAG-AAGTGGCTCA  868
      ||||||||| ||||||||||
seq2  TGCCTGGAGAAAGTGGCTCA  869