MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-016J04
Chromosome	10 (Build37)
Map Location	37,606,638 - 37,607,695
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Hdac2, Marcks, LOC100040846
Downstream gene	LOC100040915
Link	Open Mouse BAC browser

Click to get alignment info.

name	Hdac2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15182 MGI:1097691
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Marcks (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17118 MGI:96907
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040846 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100040915 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Hdac2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87162463 GeneID:15182 MGI:1097691
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : histone deacetylase 2 transcript_id : NM_008229.2

name	Marcks (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865974 GeneID:17118 MGI:96907
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myristoylated alanine rich protein kinase C substrate transcript_id : NM_008538.2

name	LOC100040846 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260682 GeneID:100040846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040846 transcript_id : XM_001475382.1

name	Hdac2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87162464 CCDS:CCDS23783.1 GeneID:15182 MGI:1097691
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS]; GO:0000792 - heterochromatin [Evidence IDA]; GO:0000118 - histone deacetylase complex [Evidence TAS]; GO:0005634 - nucleus [Evidence TAS] [Evidence IDA]; GO:0005657 - replication fork [Evidence IDA] GO_function : GO:0004407 - histone deacetylase activity [Evidence TAS] [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence TAS] GO_process : GO:0016568 - chromatin modification [Evidence TAS] [Evidence IEA]; GO:0016575 - histone deacetylation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : histone deacetylase 2 protein_id : NP_032255.2

name	Marcks (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678768 CCDS:CCDS23784.1 GeneID:17118 MGI:96907
definition	GO_component : GO:0005938 - cell cortex [Evidence IDA]; GO:0005813 - centrosome [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0042585 - germinal vesicle [Evidence IDA]; GO:0016020 - membrane [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA] codon_start : 1 product : myristoylated alanine rich protein kinase C substrate protein_id : NP_032564.1

name	LOC100040846 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260683 GeneID:100040846
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475432.1

name	LOC100040915 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040915
definition	number : 1 pseudo : _no_value

clone name	MSMg01-431C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430P04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-349J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495H01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-453A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360B07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-214B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-119F18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-152M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099N01
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-016J04.b	B6Ng01-016J04.g
ACC	DH850500	DH850501
length	1,176	1,040
definition	DH850500\|Mus musculus domesticus DNA, BAC clone: B6Ng01-016J04, 5' end.	DH850501\|Mus musculus domesticus DNA, BAC clone: B6Ng01-016J04, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctaaggagtaccaaatggcagagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat tccacttcactccagtcagaatggctaagataaaaaactcaggtggcagc agatgctggcaaggatgtggaaaaaggggaacactcctccattgttggtg ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca gaaaattggacataatactaatggaggatcccacaatacctctcttgggc atatatccagaagatgtcccaaccagtaagaaaatcacatgctccactat gttcatagcagccttgtttataatagccagaagctggaaagaacccagat gcccctcaacagaggaatggatacagaaaaggtggtacatttacacaatg gaatactactcagctattaaaaaacatgaatttatgaaattcctaggcaa atgggtggacctggagggtatcatcctgagtgaggtaacccaatcacaaa ggaactcacacaatatgtactcactgataagtggatattagcccagaaac ttaggatacccaagatataagatacaacttgccaaacgcatgaaattcaa gaagaacgaagaccaaagtgtggacactttaccctttcttagaaatggga acaaaacacccatggaaggagttacagagacaaaatttggagctgtgaca aaaggatggaccatctagtgattgccatatgcagggatccatcttataat cagcttccaaatgctgacaccattgcatacactagcaagatttgctgaaa agacccagatatagctctctcttgtgagactatgctggggcctagcaaca cagaagtggatgatcacagtcagctattggatgggttcacattgccccca atggagagctagagaaattacccaagagctaaagggaactgcaaccctta tagtggaacaacaatatgaactaaccagtacccgggagctcttgtctctt gctgcatatgttattcaaagaatgtctagtcggcatcactgcaatggaat gccaatggactgcaactttattgcccagtacagggaacgcatggtccaaa ggggaatgggtggtgggatgggaatg	gaattctttgtttacatcaaaaccccatttcatttgataagcctcaatat tctaatcatctctttattttatttataggaaatttaaatttttcactaaa taaactttaatataatataaaatataatctctattttacttttgttttta aaagatattatctctgttaatcaaatccttaaaaacatcaatagttttac tagcctttgtataggtcagtatacttaggcttctggaggttgacagggtt gcccaagattacaaaccagcaaatggtaaaaaaaaaaaaaaatggtttga aagactctgggccatgtatgtaggtttctatgaattccctatggtctttt gttaatgtcttagtttggattttattgctgtgaagagacaatgtgaccaa ggcaattcttacaaaggaaaatattttaatagggatggcttatatttcca gaggtttactctgttatcatcattgtgagaagcatggcagagtataggaa gacacgatgctggaggacctgaaaattctacatcttgatccaccaggcag caaaagggaactatgtgccaccctcgacacatcttgagcataaaggacca cagagaccacccctaaagtggtatatttcctccaacagggccacacacat tccaaaaaggtcatacctcctaataatgccactttttatcagcccatcat ttaaacacatgagtataagggggccatatctcttcaaatcaccattagta tcaattacaagttaatcaagtactgattcatgtctatgtattatttcttt aaagaagtaataaaatgatctgcttcttaatatttttttctatttatttt gtttataaaattagtaataattcccttcttaggattaagacaaatagaca ttaaagtaaaacaagtggctggaaagatagcccaatgattgagacactga ctgatttcacaaatgacctgggttgcttcatatgagttggacatatgcta taaaatgaaaataatatatcattttcatttagaggctact
quality values	Open. Hide. 57 46 12 24 57 42 39 33 20 47 61 61 53 53 50 61 61 61 53 61 61 47 43 61 61 47 61 37 32 18 15 43 21 31 52 36 55 61 61 61 61 61 59 61 61 61 61 61 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 44 55 61 59 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 52 59 61 61 44 55 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 59 59 59 59 59 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 52 61 61 61 61 61 61 61 61 59 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 55 55 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 53 61 61 61 61 61 61 61 61 61 61 47 61 61 61 53 61 52 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 53 53 61 61 53 61 52 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 52 61 61 52 61 61 61 61 45 53 61 61 61 53 57 57 57 53 50 57 57 53 57 57 53 57 40 46 53 53 53 53 57 53 53 53 52 57 45 50 53 47 47 45 57 45 53 53 45 53 57 57 57 57 57 47 45 47 57 53 50 53 32 53 53 53 53 47 47 47 53 45 47 43 57 53 30 57 52 43 47 57 57 34 53 30 52 45 53 57 52 53 57 45 52 38 53 40 45 43 46 57 45 45 50 57 47 50 57 53 53 50 50 38 40 57 57 45 50 57 53 32 53 45 40 27 46 46 36 50 34 53 57 57 38 35 45 53 52 45 45 53 41 29 50 53 27 52 40 53 53 43 32 37 27 53 53 38 37 57 50 57 32 53 30 50 53 50 40 52 34 38 21 57 57 50 37 53 31 24 37 46 50 38 38 36 50 41 35 33 33 40 43 32 32 37 33 18 52 31 35 35 40 44 37 36 30 57 57 37 35 35 53 30 42 53 42 48 37 33 23 40 40 32 28 33 41 46 46 36 29 16 57 29 24 40 30 39 41 37 34 24 37 39 29 37 33 37 30 22 43 32 28 30 32 31 31 9 22 30 32 30 38 45 42 39 22 28 39 27 47 44 44 29 17 29 16 51 48 25 13 39 22 21 29 34 34 34 31 18 29 31 34 41 26 27 34 28 28 36 14 30 24 32 22 34 34 25 9 10 33 37 30 15 29 31 41 19 26 26 18 29 23 27 24 28 31 31 21 28 38 30 31 31 30 21 23 31 23 38 29 27 22 39 18 28 34 21 9 13 29 31 39 31 28 23 51 43 7 14 12 23 34 25 27 21 29 26 46 46 46 32 23 7 15 39 17 30 30 20 12 29 20 10 10 13 10 28 41 29 6 31 20 25 31 31 15 8 8 6 9 28 20 28 51 11 28 34 17 10 15 22 17 13 25 17 14 24 51 29 14 14 19 21 8 24 6 9 28 20 15 17 25 13 12 6 15 13 6 4 6 23 13 19 17 19 15 15 25 11 10 8 8 13 35 22 7 35 9 30 7 9 7 6 10 33 19 12 25 8 10 6 6 5 10 29 29 16 7 12 16 12 10 5 6 9 10 12 6 20 37 31 9 10 19 4 4 4 15 15 29 8 14 27 20 7 19 6 20 7 5 5 11 23 10 11 22 6 14 11 16 25 6 9 5 16 7 6 16 13 5 19 8 13 20 14 13 13 15 17 21 7 4 5 8 9 9 36 26 5 4 7 16 6 4 23 36 15 14 16 5 7 18 5 4 15 17 4 6 5 3 7 7 14 4 4 7 4 7 4 8 15 12 6 5 3 4 11 20 7 5 4 14 5 13 4 8 6 3	Open. Hide. 59 59 59 59 61 61 61 61 61 61 61 61 59 52 59 49 61 59 61 61 61 61 61 61 61 61 59 61 61 59 59 59 59 59 61 61 59 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 59 55 59 59 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 61 61 59 59 59 59 59 59 45 61 59 59 61 59 61 61 61 61 59 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 59 59 59 59 61 59 59 61 61 61 61 59 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 43 55 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 55 55 55 61 55 55 55 55 55 55 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 55 61 61 61 61 61 55 55 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 55 50 55 50 55 61 61 55 55 50 61 53 61 53 61 53 50 50 61 61 61 61 61 50 61 50 61 53 61 61 61 61 61 53 50 61 61 39 61 61 61 61 61 61 53 52 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 50 61 61 53 61 61 61 61 61 61 53 53 61 53 61 61 61 61 46 61 61 40 61 61 53 53 53 47 31 47 61 61 53 57 53 53 50 45 53 43 53 53 57 57 57 53 50 53 47 53 52 47 47 53 57 52 39 53 42 53 53 52 57 38 36 47 53 40 53 57 57 57 53 53 57 57 53 45 57 53 33 40 40 45 52 57 57 47 53 50 57 39 16 57 50 45 53 57 53 38 57 38 53 47 47 45 53 39 53 53 52 50 40 53 57 53 21 32 35 12 53 32 53 42 47 53 50 57 57 32 53 57 45 52 45 38 43 32 47 33 41 53 53 57 57 53 29 39 34 21 25 53 57 50 27 50 42 30 39 57 38 25 57 37 47 30 53 38 42 53 52 30 40 32 31 38 34 37 57 57 46 33 24 57 30 33 30 45 53 40 37 43 37 53 24 53 30 36 41 28 52 53 28 37 28 37 36 31 36 37 37 30 32 47 37 34 41 12 19 37 31 21 32 25 36 40 24 30 40 29 27 40 37 48 40 53 29 37 28 29 47 36 43 34 27 30 47 29 24 18 25 30 25 15 12 13 16 35 40 30 48 32 29 36 30 18 28 31 28 27 28 48 47 21 7 23 33 29 38 25 30 29 29 27 29 25 23 39 17 14 44 28 39 41 46 46 43 22 46 22 30 28 41 25 30 29 30 37 14 43 14 46 29 34 25 28 51 43 43 6 6 18 9 10 25 16 23 22 32 17 25 30 46 26 13 12 36 29 11 8 32 24 29 16 33 24 29 15 31 25 38 51 36 21 23 7 26 7 17 30 29 16 36 31 11 15 31 44 51 36 29 16 26 12 8 19 31 25 28 32 25 28 38 19 22 29 5 10 16 34 29 30 15 10 10 24 33 20 19 34 24 14 32 7 6 24 19 33 31 30 10 21 33 15 44 12 21 19 29 15 35 26 26 32 31 16 20 19 38 44 34 28 35 16 23 19 29 17 9 9 29 17 26 24 21 19 14 20 19 19 10 30 10 9 4 10 21 8 3 4 5 36 34 17 7 9 20 34 37 30 5 6 6 5 3 4 10 24 24 17 26 32 26 8 7 3 3 4 19 12 9 23 10 26 10 15 15 15 27

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_37606638_37607695
seq2: B6Ng01-016J04.g_67_1106

seq1  GAATTCTTTGTTTACATCAAAACCCCATTTCATTTGATAAGCCTCAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTACATCAAAACCCCATTTCATTTGATAAGCCTCAATAT  50

seq1  TCTAATCATCTCTTTATTTTATTTATAGGAAATTTAAATTTTTCACTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATCATCTCTTTATTTTATTTATAGGAAATTTAAATTTTTCACTAAA  100

seq1  TAAACTTTAATATAATATAAAATATAATCTCTATTTTACTTTTGTTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTTAATATAATATAAAATATAATCTCTATTTTACTTTTGTTTTTA  150

seq1  AAAGATATTATCTCTGTTAATCAAATCCTTAAAAACATCAATAGTTTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATATTATCTCTGTTAATCAAATCCTTAAAAACATCAATAGTTTTAC  200

seq1  TAGCCTTTGTATAGGTCAGTATACTTAGGCTTCTGGAGGTTGACAGGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTTGTATAGGTCAGTATACTTAGGCTTCTGGAGGTTGACAGGGTT  250

seq1  GCCCAAGATTACAAACCAGCAAATGGTAAAAAAAAAAAAAAATGGTTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAGATTACAAACCAGCAAATGGTAAAAAAAAAAAAAAATGGTTTGA  300

seq1  AAGACTCTGGGCCATGTATGTAGGTTTCTATGAATTCCCTATGGTCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCTGGGCCATGTATGTAGGTTTCTATGAATTCCCTATGGTCTTTT  350

seq1  GTTAATGTCTTAGTTTGGATTTTATTGCTGTGAAGAGACAATGTGACCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGTCTTAGTTTGGATTTTATTGCTGTGAAGAGACAATGTGACCAA  400

seq1  GGCAATTCTTACAAAGGAAAATATTTTAATAGGGATGGCTTATATTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATTCTTACAAAGGAAAATATTTTAATAGGGATGGCTTATATTTCCA  450

seq1  GAGGTTTACTCTGTTATCATCATTGTGAGAAGCATGGCAGAGTATAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTACTCTGTTATCATCATTGTGAGAAGCATGGCAGAGTATAGGAA  500

seq1  GACACGATGCTGGAGGACCTGAAAATTCTACATCTTGATCCACCAGGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACGATGCTGGAGGACCTGAAAATTCTACATCTTGATCCACCAGGCAG  550

seq1  CAAAAGGGAACTATGTGCCACCCTCGACACATCTTGAGCATAAAGGACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGGAACTATGTGCCACCCTCGACACATCTTGAGCATAAAGGACCA  600

seq1  CAGAGACCACCCCTAAAGTGGTATATTTCCTCCAACAGGGCCACACACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACCACCCCTAAAGTGGTATATTTCCTCCAACAGGGCCACACACAT  650

seq1  TCCAAAAAGGTCATACCTCCTAATAATGCCACTTTTTATCAGCCCATCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAAAGGTCATACCTCCTAATAATGCCACTTTTTATCAGCCCATCAT  700

seq1  TTAAACACATGAGTATAAGGGGGCCATATCTCTTCAAATCACCATTAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACACATGAGTATAAGGGGGCCATATCTCTTCAAATCACCATTAGTA  750

seq1  TCAATTACAAGTTAATCAAGTACTGATTCATGTCTATGTATTATTTCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTACAAGTTAATCAAGTACTGATTCATGTCTATGTATTATTTCTTT  800

seq1  AAAGAAGTAATAAAATGATCTGCTTCTTAATATTTTTTTCTATTTATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGTAATAAAATGATCTGCTTCTTAATATTTTTTTCTATTTATTTT  850

seq1  GTTTATAAAATAAGTAATAATTCCCTTCTTAGGATTAAGACAAAATAGAA  900
      ||||||||||| ||||||||||||||||||||||||||||| |||||| |
seq2  GTTTATAAAATTAGTAATAATTCCCTTCTTAGGATTAAGAC-AAATAG-A  898

seq1  CATTAAAAGTAAAAACAAGTGGCTGGAAAGATAGCCCAATGATTGAGAAC  950
      |||| ||||| |||||||||||||||||||||||||||||||||||| ||
seq2  CATT-AAAGT-AAAACAAGTGGCTGGAAAGATAGCCCAATGATTGAG-AC  945

seq1  ACTGACTGATTTCACAAATGACCTGGGTTTGCTTCATAATGAGTTGGACA  1000
      ||||||||||||||||||||||||||| ||||||||| ||||||||||| 
seq2  ACTGACTGATTTCACAAATGACCTGGG-TTGCTTCAT-ATGAGTTGGAC-  992

seq1  ATATGCTTATAAAATTGAAAAATAAATTATATCATTTTCAAATATTTAAG  1050
      |||||| ||||||||   |||||||  |||||||||||||     || ||
seq2  ATATGC-TATAAAAT--GAAAATAA--TATATCATTTTCA-----TTTAG  1032

seq1  AGGCTACT  1058
      ||||||||
seq2  AGGCTACT  1040

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information