BAC Information

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BAC

Clone NameB6Ng01-016J10
Chromosome10 (Build37)
Map Location 103,815,187 - 103,945,446
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701, EG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016J10.bB6Ng01-016J10.g
ACCDH850512DH850513
length988969
definitionDH850512|Mus musculus domesticus DNA, BAC clone: B6Ng01-016J10, 5' end.DH850513|Mus musculus domesticus DNA, BAC clone: B6Ng01-016J10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,815,187 - 103,816,041)(103,944,487 - 103,945,446)
sequence
gaattcccatgacatccaaggacaagagttacacctgagcccagcctgac
accccaaggctgtaaggaggatctatgttccggagataagatgcagagtg
cctgccgcctggcccctgacttcagccctcatgtcagcagatgcccacct
tttttgttctttgttaaattcccccctcgaccccttcctattcaccgcga
tgtatgctttaaaaccaggcacctcaacctaataaaaggagaccttgata
ggtacactctatttggtcatccatcacttctcttttctcttccaatccca
tttccttacaggtttgtggtcccccttgcacccaccaataactgaatcct
gcaggatgagatacaccagcaccatttattgaagatgttttcttctttaa
tctgtaagttttggacttctttgtcaaagatcatgtgcccataagtatgt
gggtttatttctaggtcttcaattctaatccattagtaaacgtgtctgcc
tctctaccaataccatgtggttgttagcactgttgcttgaagacaagggt
gtgattacctgagaagctcttttatttttgagaattgttttggctatcct
gggttttgttgttgttgttgttccaaatgaaattaagaattgctctttcc
ggatggaccatctagagactgccatacctgggaatccatcccatagtcag
cctccaaacgctgacaccattgcatacgctagcaagattttgctgaaagg
accctgatatagctgtctcttgtgagactatgccggggcctagcaaacac
ataagtggatgctcacagtcagctattggatgtaccacagggtccccaat
ggaggagctagagaaagtacccaaggagctaaagggatctgcaatcctat
aggtggacaacaatatgaactaacctgtacccccagagcttgtgtctcta
gctgcatatttatcagaagatggcctggtcggcatcag
gaattccattctcttaactgggcttccttctctggcctcagtaggagagg
atgtacccagactagcagtgacttgatgtgcgaggatgggttggtgtcta
ggggtggctcccccttctcaaaggagaagaagagagagttatggtgggaa
gaactgtgaggtgagactgagaggaggtggatgctataattgggatgtaa
agtgaataaataaataaataaataagtaaataaataaatggaaaaataaa
acccttagtgtctgggaacctcaatattctctattgtatgtacttccctt
cgaattcttttttttaaagcaaacaaatacaaatttgtagttagtgtatg
cagcaggtttccacataacttaatatatccttaaagtttgttaatcttga
ttacaacttgtcccctgagccaccctcctcttccctttctcttaaaaaaa
caaaaaagaattatctattattttatatgcattggtggtttgtctgcatg
aatgtctgtgtgagggtgtcagattccttggaacaataaagcaatcaata
tatactaaattgcactgaactctgatagatttattggaaaatactctaac
cattcctgcctttgagtgtcttatataattgtagattcattttgtcatca
catttttatttaaggagctgtaagctagatgcagacttctgaagtttagt
gcgcactgtatgtctttccctgtgagtcagttttctaggtcatgctttga
agcagacatctgagatgttaaactttcatgggaatctgtggaacgaaagt
gcatacattttgccaatgccttcataggccttctcaaagtcagggacctt
gaaacatctgcccatattccctttgtccaaattaatactttgcacacagt
gaatgggcaatgggacattaagaaatgtatcaccacctagtagaaggaag
gtttgctaatggaatagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103815187_103816041
seq2: B6Ng01-016J10.b_40_894

seq1  GAATTCCCATGACATCCAAGGACAAGAGTTACACCTGAGCCCAGCCTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATGACATCCAAGGACAAGAGTTACACCTGAGCCCAGCCTGAC  50

seq1  ACCCCAAGGCTGTAAGGAGGATCTATGTTCCGGAGATAAGATGCAGAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAAGGCTGTAAGGAGGATCTATGTTCCGGAGATAAGATGCAGAGTG  100

seq1  CCTGCCGCCTGGCCCCTGACTTCAGCCCTCATGTCAGCAGATGCCCACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCGCCTGGCCCCTGACTTCAGCCCTCATGTCAGCAGATGCCCACCT  150

seq1  TTTTTGTTCTTTGTTAAATTCCCCCCTCGACCCCTTCCTATTCACCGCGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTCTTTGTTAAATTCCCCCCTCGACCCCTTCCTATTCACCGCGA  200

seq1  TGTATGCTTTAAAACCAGGCACCTCAACCTAATAAAAGGAGACCTTGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCTTTAAAACCAGGCACCTCAACCTAATAAAAGGAGACCTTGATA  250

seq1  GGTACACTCTATTTGGTCATCCATCACTTCTCTTTTCTCTTCCAATCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACACTCTATTTGGTCATCCATCACTTCTCTTTTCTCTTCCAATCCCA  300

seq1  TTTCCTTACAGGTTTGTGGTCCCCCTTGCACCCACCAATAACTGAATCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTACAGGTTTGTGGTCCCCCTTGCACCCACCAATAACTGAATCCT  350

seq1  GCAGGATGAGATACACCAGCACCATTTATTGAAGATGTTTTCTTCTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATGAGATACACCAGCACCATTTATTGAAGATGTTTTCTTCTTTAA  400

seq1  TCTGTAAGTTTTGGACTTCTTTGTCAAAGATCATGTGCCCATAAGTATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAGTTTTGGACTTCTTTGTCAAAGATCATGTGCCCATAAGTATGT  450

seq1  GGGTTTATTTCTAGGTCTTCAATTCTAATCCATTAGTAAACGTGTCTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTATTTCTAGGTCTTCAATTCTAATCCATTAGTAAACGTGTCTGCC  500

seq1  TCTCTACCAATACCATGTGGTTGTTAGCACTGTTGCTTGAAGACAAGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACCAATACCATGTGGTTGTTAGCACTGTTGCTTGAAGACAAGGGT  550

seq1  GTGATTACCTGAGAAGCTCTTTTATTTTTGAGAATTGTTTTGGCTATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTACCTGAGAAGCTCTTTTATTTTTGAGAATTGTTTTGGCTATCCT  600

seq1  GGGTTTTGTTGTTGTTGTTGTTCCAAATGAAATTAAGAATTGCTCTTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTGTTGTTGTTGTTGTTCCAAATGAAATTAAGAATTGCTCTTTCC  650

seq1  GGATGGACCATCTAGAGACTGCCATACCTGGGAATCCATCCCATAGTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGACCATCTAGAGACTGCCATACCTGGGAATCCATCCCATAGTCAG  700

seq1  CCTCCAAACGCTGACACCATTGCATACGCTAGCAAGATTTTGCTGAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAAACGCTGACACCATTGCATACGCTAGCAAGATTTTGCTGAAAGG  750

seq1  ACCCTGATATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGATATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACAC  800

seq1  ATAAGTGGATGCTCACAGTCAGCTATTGGATGTACCACAGGGTCCCCAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGGATGCTCACAGTCAGCTATTGGATGTACCACAGGGTCCCCAAT  850

seq1  GGAGG  855
      |||||
seq2  GGAGG  855

seq1: chr10_103944487_103945446
seq2: B6Ng01-016J10.g_67_1035 (reverse)

seq1  AGCTATTCCAATTAGCAAACCTTCCTTCTACATAGGTGGTG-TACCATTC  49
      ||||||||| ||||||||||||||||||||| ||||||||| |||  |||
seq2  AGCTATTCC-ATTAGCAAACCTTCCTTCTAC-TAGGTGGTGATACATTTC  48

seq1  TATATGT-CCATTGACCA-TCACTGTGCTGC-AAGTCTTAATTTGG-CCA  95
      |  |||| |||||| ||| |||||||| ||| |||| ||||||||| | |
seq2  TTAATGTCCCATTGCCCATTCACTGTG-TGCAAAGTATTAATTTGGACAA  97

seq1  AGGGAATATGGGCAGATGTTTCAAGGT-CCTGACTTTGATGAAGGCCTAT  144
      ||||||||||||||||||||||||||| ||||||||||| ||||||||||
seq2  AGGGAATATGGGCAGATGTTTCAAGGTCCCTGACTTTGA-GAAGGCCTAT  146

seq1  G-AGGCA-TGGC-AAATGTATGCAC-TTCGTTCCACAGATTCCCATGAAA  190
      | ||||| |||| |||||||||||| ||||||||||||||||||||||||
seq2  GAAGGCATTGGCAAAATGTATGCACTTTCGTTCCACAGATTCCCATGAAA  196

seq1  GTTTAACATCTCAGATGTCTGCTTC-AAGCATGACCTAG-AAACTGACTC  238
      ||||||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  GTTTAACATCTCAGATGTCTGCTTCAAAGCATGACCTAGAAAACTGACTC  246

seq1  ACAGGGAAAGACATACAGTGCGCACTAAACTTCAGAAGTCTGCATCTAGC  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAAAGACATACAGTGCGCACTAAACTTCAGAAGTCTGCATCTAGC  296

seq1  TTACAGCTCCTTAAAT-AAAATGTGATGACAAAATGAATCTACAATTATA  337
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTACAGCTCCTTAAATAAAAATGTGATGACAAAATGAATCTACAATTATA  346

seq1  TAAGACACTCAAAGGCAGGAATGGTTAGAGTATTTTCCAATAAATCTATC  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACACTCAAAGGCAGGAATGGTTAGAGTATTTTCCAATAAATCTATC  396

seq1  AGAGTTCAGTGCAATTTAGTATATATTGATTGCTTTATTGTTCCAAGGAA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCAGTGCAATTTAGTATATATTGATTGCTTTATTGTTCCAAGGAA  446

seq1  TCTGACACCCTCACACAGACATTCATGCAGACAAACCACCAATGCATATA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACACCCTCACACAGACATTCATGCAGACAAACCACCAATGCATATA  496

seq1  AAATAATAGATAATTCTTTTTTGTTTTTTTAAGAGAAAGGGAAGAGGAGG  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATAGATAATTCTTTTTTGTTTTTTTAAGAGAAAGGGAAGAGGAGG  546

seq1  GTGGCTCAGGGGACAAGTTGTAATCAAGATTAACAAACTTTAAGGATATA  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCAGGGGACAAGTTGTAATCAAGATTAACAAACTTTAAGGATATA  596

seq1  TTAAGTTATGTGGAAACCTGCTGCATACACTAACTACAAATTTGTATTTG  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTATGTGGAAACCTGCTGCATACACTAACTACAAATTTGTATTTG  646

seq1  TTTGCTTTAAAAAAAAGAATTCGAAGGGAAGTACATACAATAGAGAATAT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTAAAAAAAAGAATTCGAAGGGAAGTACATACAATAGAGAATAT  696

seq1  TGAGGTTCCCAGACACTAAGGGTTTTATTTTTCCATTTATTTATTTACTT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTCCCAGACACTAAGGGTTTTATTTTTCCATTTATTTATTTACTT  746

seq1  ATTTATTTATTTATTTATTCACTTTACATCCCAATTATAGCATCCACCTC  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTTATTTATTCACTTTACATCCCAATTATAGCATCCACCTC  796

seq1  CTCTCAGTCTCACCTCACAGTTCTTCCCACCATAACTCTCTCTTCTTCTC  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGTCTCACCTCACAGTTCTTCCCACCATAACTCTCTCTTCTTCTC  846

seq1  CTTTGAGAAGGGGGAGCCACCCCTAGACACCAACCCATCCTCGCACATCA  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGAAGGGGGAGCCACCCCTAGACACCAACCCATCCTCGCACATCA  896

seq1  AGTCACTGCTAGTCTGGGTACATCCTCTCCTACTGAGGCCAGAGAAGGAA  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTGCTAGTCTGGGTACATCCTCTCCTACTGAGGCCAGAGAAGGAA  946

seq1  GCCCAGTTAAGAGAATGGAATTC  960
      |||||||||||||||||||||||
seq2  GCCCAGTTAAGAGAATGGAATTC  969