BAC Information

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BAC

Clone NameB6Ng01-017B14
Chromosome10 (Build37)
Map Location 105,013,809 - 105,015,041
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042383, Tmtc2, EG627573
Downstream geneBC067068, Ccdc59, EG667758, EG639162, Ppfia2, Olfr1556-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017B14.bB6Ng01-017B14.g
ACCDH850876DH850877
length1,214448
definitionDH850876|Mus musculus domesticus DNA, BAC clone: B6Ng01-017B14, 5' end.DH850877|Mus musculus domesticus DNA, BAC clone: B6Ng01-017B14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctgtagattaagctgagctcaaactcagagatccatctgac
tctccctctagagtgctgctattaaaggcctgtaccactactacctggtg
ataggcacacatcagtttattaactaatcccttgaatttccattcaatct
tcataaagcttgtcccctcatccacaaagtgcccagagcccatagcatct
gaacattgtaaaagaaacttctaaaaaagggtaaacaagtaaacaataag
agtatttaagtgtgattatagaagagctgaaagcccacaaatattcatca
ggaagaagaaactaaattgttgtctatgttaaagatgccaaagccagagg
gaagaagggtgacatttcttgagtgcatcacttcctcgggaagatccatg
ataggaaatcacacaaggacagcttctttcctaagacttatgggcataca
actactagaaagctttgggttcagagagctaaaatcttgtgagcatttct
ccatttcaaaggtctgatagttttaaaaacattaagtgtggcttcttcta
caaccatccagcccctctgaattgaaagcctcagaaactgagacatgcca
taaaatggtacatcttgagattcttaatagacagcagactgcacatcctg
ccacgcttgaaaaaaatccagtttcttgtaacaaaaacgctattatactt
taacgtatgtctgtgtatccttcctgtgaattaagccatgggctcttgtg
cattgctctccaaggtctgagaaacaaccactgcttgcattttctacctt
tctcaagcaactccaaagggaaaattcaattaaatatgccatcactaccc
ctggaggtcatttatgatcacagagcctccttttagcttattaagtgcat
ttatcccgtgtgggggaggctgctgctgcttcagttctgaatttatacat
catttatttaaaactactgcagctgtccacagttgaaggaaatcatgctg
ttgtcttaagctttctaccttagaacacaagtttgtcccacccaccaaag
tgctaagcccttattttcctgagtagtcttacacatctgctacctaccca
cttcctcatgaatccattttatagtcgaacaagaacttagcctacattgt
ccgcattccggcccaggtgatcaaccttgggtcagtctccggggtaagaa
tccccttattttcc

cagggccagggggcacgaatgtataggttggggagcagggcggggggaag
gtataggggacttttggagaggaatctaggaaaggggatagcatttgcaa
tgtaaatgaagaaaatatctaattaaaaaaaaaaagacttacaagttaag
actttagttattgtgcccagcaattgagctactgttgtttctgaagtaag
ttagtgttgcattttccttcacatgacaactcatctgggctcaggagagt
aaggtacaagaaagacaaagcatggctttgcctgaggtgcaacacaaagg
tcatggggggtttgaagcatggggctgacatggtaacaacctgccagtga
gaacctagagagctgggtggagagactttggagctctgaatcatagagtt
gtcacagatcaaaactggtcatccattgcccatctgtgcatggccagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_105013809_105015041
seq2: B6Ng01-017B14.b_48_1261

seq1  GAATTCACTCTGTAGATTAAGCTGAGCTCAAACTCAGAGATCCATCTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGATTAAGCTGAGCTCAAACTCAGAGATCCATCTGAC  50

seq1  TCTCCCTCTAGAGTGCTGCTATTAAAGGCCTGTACCACTACTACCTGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTAGAGTGCTGCTATTAAAGGCCTGTACCACTACTACCTGGTG  100

seq1  ATAGGCACACATCAGTTTATTAACTAATCCCTTGAATTTCCATTCAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCACACATCAGTTTATTAACTAATCCCTTGAATTTCCATTCAATCT  150

seq1  TCATAAAGCTTGTCCCCTCATCCACAAAGTGCCCAGAGCCCATAGCATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAGCTTGTCCCCTCATCCACAAAGTGCCCAGAGCCCATAGCATCT  200

seq1  GAACATTGTAAAAGAAACTTCTAAAAAAGGGTAAACAAGTAAACAATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTGTAAAAGAAACTTCTAAAAAAGGGTAAACAAGTAAACAATAAG  250

seq1  AGTATTTAAGTGTGATTATAGAAGAGCTGAAAGCCCACAAATATTCATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTAAGTGTGATTATAGAAGAGCTGAAAGCCCACAAATATTCATCA  300

seq1  GGAAGAAGAAACTAAATTGTTGTCTATGTTAAAGATGCCAAAGCCAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAGAAACTAAATTGTTGTCTATGTTAAAGATGCCAAAGCCAGAGG  350

seq1  GAAGAAGGGTGACATTTCTTGAGTGCATCACTTCCTCGGGAAGATCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGGTGACATTTCTTGAGTGCATCACTTCCTCGGGAAGATCCATG  400

seq1  ATAGGAAATCACACAAGGACAGCTTCTTTCCTAAGACTTATGGGCATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAATCACACAAGGACAGCTTCTTTCCTAAGACTTATGGGCATACA  450

seq1  ACTACTAGAAAGCTTTGGGTTCAGAGAGCTAAAATCTTGTGAGCATTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTAGAAAGCTTTGGGTTCAGAGAGCTAAAATCTTGTGAGCATTTCT  500

seq1  CCATTTCAAAGGTCTGATAGTTTTAAAAACATTAAGTGTGGCTTCTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCAAAGGTCTGATAGTTTTAAAAACATTAAGTGTGGCTTCTTCTA  550

seq1  CAACCATCCAGCCCCTCTGAATTGAAAGCCTCAGAAACTGAGACATGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCATCCAGCCCCTCTGAATTGAAAGCCTCAGAAACTGAGACATGCCA  600

seq1  TAAAATGGTACATCTTGAGATTCTTAATAGACAGCAGACTGCACATCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGGTACATCTTGAGATTCTTAATAGACAGCAGACTGCACATCCTG  650

seq1  CCACGCTTGAAAAAAATCCAGTTTCTTGTAACAAAAACGCTATTATACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGCTTGAAAAAAATCCAGTTTCTTGTAACAAAAACGCTATTATACTT  700

seq1  TAACGTATGTCTGTGTATCCTTCCTGTGAATTAAGCCATGGGCTCTTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGTATGTCTGTGTATCCTTCCTGTGAATTAAGCCATGGGCTCTTGTG  750

seq1  CATTGCTCTCCAAGGTCTGAGAAACAACCACTGCTTGCATTTTCTACCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTCTCCAAGGTCTGAGAAACAACCACTGCTTGCATTTTCTACCTT  800

seq1  TCTCAAGCAACTCCAAAGGGAAAATTCAATTAAATATGCCATCACTACCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGCAACTCCAAAGGGAAAATTCAATTAAATATGCCATCACTACCC  850

seq1  CTGGAGGTCATTTATGATCACAGAGCCTCCTTTTAGCTTATTAAGGTGCA  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTGGAGGTCATTTATGATCACAGAGCCTCCTTTTAGCTTATTAA-GTGCA  899

seq1  TTTATCCCGTGTGGGGGAGGCTGCTGCTGCTTCAGTTCTGAATTTATACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCCGTGTGGGGGAGGCTGCTGCTGCTTCAGTTCTGAATTTATACA  949

seq1  TCATTTATTTAAAACTACTGCAGCTGTCCACAGTTGAAGGAAATCAGGCT  1000
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCATTTATTTAAAACTACTGCAGCTGTCCACAGTTGAAGGAAATCATGCT  999

seq1  GGTTGTCTTAAGCTTTCTACCTTAG-ACACAAGTTTGTCCCA-CCACCAA  1048
       |||||||||||||||||||||||| |||||||||||||||| |||||||
seq2  -GTTGTCTTAAGCTTTCTACCTTAGAACACAAGTTTGTCCCACCCACCAA  1048

seq1  AGTGCTAAGCCCTTATTTTCCTGAGTAGGTCTTACACATCTGCTACCTTA  1098
      ||||||||||||||||||||||||||| ||||||||||||||||||||  
seq2  AGTGCTAAGCCCTTATTTTCCTGAGTA-GTCTTACACATCTGCTACCTAC  1097

seq1  CCACTTCCTCAATGAATTCCATTTTATAGTCGACCA--GACCTAGCCTAC  1146
      |||||||||| ||||| |||||||||||||||| ||   || ||||||||
seq2  CCACTTCCTC-ATGAA-TCCATTTTATAGTCGAACAAGAACTTAGCCTAC  1145

seq1  ATTTGTTCTGCATTCCCGGGGCCTTTGTTGTATAATTCATACCTTTGTGG  1196
      |||   || |||||||   ||||   ||        ||| |||||    |
seq2  ATT--GTCCGCATTCC---GGCCCAGGT------GATCA-ACCTT----G  1179

seq1  TGCCAGTTCCTCGGGGGTAAAGATTTCCTTATTTTCC  1233
       | ||||  ||| |||||||  ||  |||||||||||
seq2  GGTCAGT--CTCCGGGGTAAGAATCCCCTTATTTTCC  1214


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