BAC Information

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BAC

Clone NameB6Ng01-017E23
Chromosome10 (Build37)
Map Location 51,008,536 - 51,009,273
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC629652, Ascc3, Sim1, LOC268300
Downstream geneLOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik, Vgll2, Ros1, Dcbld1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017E23.bB6Ng01-017E23.g
ACCDH851032DH851033
length1,186735
definitionDH851032|Mus musculus domesticus DNA, BAC clone: B6Ng01-017E23, 5' end.DH851033|Mus musculus domesticus DNA, BAC clone: B6Ng01-017E23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaaaatgataaaagcaatctacagcaaacca
gtagccaacatcaaagttaatggtgagaagctgaaaacaatcccactaaa
atcagggactagacaaggctgtccaatttctccctacctattcaacattg
tacttgaagtcctagccagagcaattcgacaacaaaaggagataaaggtg
atacaaattggaaaggaagaagtcaaaatattactttctgcagatgatat
gatagtatatataaatgaccctaaaaattcgaccagagaactcctaaacc
tgataaacagcttcagtgaagtacctggatataaaattaactctaacacg
tcaatggcctttctctacacaaagaataaacaggctgaaagagaaattag
tgaaacaacacccttcataatagtcacagataatataaaataccttggca
tgactctatctaaggaagtgaaagatctgtatgataagaacttcaagtct
cagaagaaaaaaaattaaagaagatctcagaagatggaaagatctcccac
gctcgtgcatgggcaggatccatatagtaaaaatggctatgttgccaaaa
gcaatctagagattcaatgcaatacccaccaaaattccaactcaattctt
caatgaattagaaatggcaatctgcaaattcatccggaataacaaaaagt
ctaggatagcaaaaactcttctcaagaataaaagaacctctggtggaatc
accatgcctgacctaaagctgtactacagagcaattgtgataaaaactgc
atggtactggtgtagcaacacacaaatagaccaatggcatagaattgaag
acccagaaatgaacccacacacctatggtcacttgatctttgacaagtga
gctaaaacttccagtggaaaaagactgcattttcaacaaatggtgctgac
acaactggtagtttcatgtagagaatgcgaatgacccattcctatcctcc
tgtatcatgtcaattccagtggatagaacttcccatgaatgaacctgaac
tcataaagagaagtgggaaaaggctgagaattgtccatggaaatctggaa
tgacgcatgccttgggcttagatcggaatgcatgaccttaattgcagctc
gagtagacgtctagacaagccacattaagcttcatc
gaattcaaagtgaataaagatacacacacacacacacacacacacacaca
cacatatatatatatatatatatatatatatatatatatatatatatatg
gagagagagagaggggagtgtgtgtgtgtgaaaagaagtttggagttaat
tgcgcgtccaaatgatccgtgtgttttgatcctagccggagggggggggg
gggggggggggaaaaaaattgcaaataacctgtctccaaacaatttttaa
acttaaatattttaattgctgcattaaaattgttatcttcttaaataaac
ttctgattgaaacaaaacaaaatagagtaaaacatgcagttattgaaaac
caaagaggattgttgctgtctgtaatctggaggatttcaacgaaacttac
tcctctttccttcagtctatcaaattttccctccttcttttctctccctc
ctgcttcctttctattgccttcttttttcctcctagctcctgaatttagc
agtagtttagataatgtctattaaccaacgtttgctcagaagtactgaaa
tatgtaagagctgtttttacagaaatgatgagacaaattaagtaacccag
ttctgctgtactgctttctcttttgttgttcttgatgtaatcaggttatg
tcttgctatcttctttcttttctttgggactgtagataataccggttcta
catattgttaatgggtacaaaatggactctaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_51008536_51009273
seq2: B6Ng01-017E23.g_68_802 (reverse)

seq1  TTCCTAGTGTCCTTTTTGTA-CCATTAACAATCTGTAGAACCGGTATTTT  49
      ||||||| |||| ||||||| ||||||||||| ||||||||||||||| |
seq2  TTCCTAGAGTCCATTTTGTACCCATTAACAATATGTAGAACCGGTATTAT  50

seq1  CTACAGTCCCAAAGAAAAGAAAGAAGATAGCAAGACATAACCTGACTACA  99
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTACAGTCCCAAAGAAAAGAAAGAAGATAGCAAGACATAACCTGATTACA  100

seq1  TCAAGAACAACAAAAGAGAAAGCAGTACAGCAGAACTGGGTTACTTTATT  149
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCAAGAACAACAAAAGAGAAAGCAGTACAGCAGAACTGGGTTACTTAATT  150

seq1  TGTCTCATCACTTTCTGTAAAAACAGCTCTTACATATTTCAGTACTTCTG  199
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCATCA-TTTCTGTAAAAACAGCTCTTACATATTTCAGTACTTCTG  199

seq1  GGCAAACGTTGGCTAATAGACATTATCTAAACTACTGCTAAATTCAGGAG  249
       ||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGCAAACGTTGGTTAATAGACATTATCTAAACTACTGCTAAATTCAGGAG  249

seq1  CTAGGAGGAAAAAAGAAGGCAATAGAAAGGAAGCAGGAGGGAGAGAAAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGGAAAAAAGAAGGCAATAGAAAGGAAGCAGGAGGGAGAGAAAAG  299

seq1  AAGGAGGGAAAATTTGATAGACTGAAGGAAAGAGGAGTAAGTTTCGTTGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGGAAAATTTGATAGACTGAAGGAAAGAGGAGTAAGTTTCGTTGA  349

seq1  AATCCTCCAGATTACAGACAGCAACAATCCTCTTTGGTTTTCAATAACTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCCAGATTACAGACAGCAACAATCCTCTTTGGTTTTCAATAACTG  399

seq1  CATGTTTTACTCTATTTTGTTTTGTTTCAATCAGAAGTTTATTTAAGAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTACTCTATTTTGTTTTGTTTCAATCAGAAGTTTATTTAAGAAG  449

seq1  ATAACAATTTTAATGCAGCAATTAAAATATTTAAGTTTAAAAATTGTTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAATTTTAATGCAGCAATTAAAATATTTAAGTTTAAAAATTGTTTG  499

seq1  GAGACAGGTTATTTGCAATTTTTTTCAATATCTTAAAGAACTACTTTATG  549
      ||||||||||||||||||||||||||     |        |  |  |  |
seq2  GAGACAGGTTATTTGCAATTTTTTTCCCCCCCCCCCCCCCCCCCCCTCCG  549

seq1  GCTAGGATCAAAACACAGGGATCATTTGGAAGGGGAATTAACTCCAAACT  599
      ||||||||||||||||| |||||||||||| | | |||||||||||||||
seq2  GCTAGGATCAAAACACACGGATCATTTGGACGCGCAATTAACTCCAAACT  599

seq1  TCTTTTTCTGGTTTGTTAAATCCTCTCTCTCTCTCTCCATATATATATAT  649
      || |||||          | ||| ||||||||||||||  ||||||||||
seq2  TC-TTTTCACACACACACACTCCCCTCTCTCTCTCTCC--ATATATATAT  646

seq1  ATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGT  696

seq1  GTGTGTGTGTGTGTGTGTATCTTTATTCACTTTGAATTC  738
      |||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTATCTTTATTCACTTTGAATTC  735