BAC Information

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BAC

Clone NameB6Ng01-017I07
Chromosome10 (Build37)
Map Location 110,752,524 - 110,850,540
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042506, LOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17, EG432502, LOC667904, Osbpl8, Bbs10
Downstream geneNap1l1, EG382421, Phlda1, Krr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017I07.bB6Ng01-017I07.g
ACCDH851180DH851181
length904154
definitionDH851180|Mus musculus domesticus DNA, BAC clone: B6Ng01-017I07, 5' end.DH851181|Mus musculus domesticus DNA, BAC clone: B6Ng01-017I07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,752,524 - 110,753,427)(110,850,387 - 110,850,540)
sequence
gaattcacataatcgttgatccagtgttcagaaaggaattagaaccgatt
tttcatgtatgtggggctaggaatcaaactcaagtattagtaaggttctt
taaaagaacagaactgatagagtacacacatatgagtttatcagcttggc
ttataggctatggactggataatcaacaatgcctgtcttccaacaggaag
gctaagaatcctattgttgttaagtcacaaaactggtgtctaagaagttc
tggagctcagaggattgctagagagtggttggttttcattctatactgag
acccaaagaaggaaatgatagggatttcttgcaaaacgaaaagggaggat
atatatataatctgcctacaatttaagcagaggaatgacaataatctgat
ttgcatttataaagataatgtggaaattctagacttggagtgtctgggtc
tttttgaaagacaagccagggtggaaccaagataatttttagggtttggt
ctcaagaaacttggtggatggagcaacatctgagaaacattcttcccttg
atagccctggtaatacagtgtagagtttgggggtggctagaaacaaagct
ggagaaggaaaaaaaaatgcttaaatcacacgacgttttggattttatcc
tctaagtctataattaaaggaacagatgtagatacttgtattttttacag
aaaaggaactggggcaatgcaagcaagggtctgttctccttgctgcctcc
tttcctcctattttgggatgccattcatttttatttaaccttgaaggcct
acgctctccctttgggttgctaaagatccacagaaaactccatcccctgt
gaacttcagtcaagcctgactgtacctgtaacacaagccgcctcctcttc
ctcc
tctctggatgctgctggcatctagttcccccaaataattcatataggcat
gtttgtaccttcccttgtgcttacattttctccactgctccctttcctaa
ctcagtctgactgttgtaaacacaggtgaggaagtaggagtgggggatgg
gtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_110752524_110753427
seq2: B6Ng01-017I07.b_46_949

seq1  GAATTCACATAATCGTTGATCCAGTGTTCAGAAAGGAATTAGAACCGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATAATCGTTGATCCAGTGTTCAGAAAGGAATTAGAACCGATT  50

seq1  TTTCATGTATGTGGGGCTAGGAATCAAACTCAAGTATTAGTAAGGTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGTATGTGGGGCTAGGAATCAAACTCAAGTATTAGTAAGGTTCTT  100

seq1  TAAAAGAACAGAACTGATAGAGTACACACATATGAGTTTATCAGCTTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAACAGAACTGATAGAGTACACACATATGAGTTTATCAGCTTGGC  150

seq1  TTATAGGCTATGGACTGGATAATCAACAATGCCTGTCTTCCAACAGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGCTATGGACTGGATAATCAACAATGCCTGTCTTCCAACAGGAAG  200

seq1  GCTAAGAATCCTATTGTTGTTAAGTCACAAAACTGGTGTCTAAGAAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAATCCTATTGTTGTTAAGTCACAAAACTGGTGTCTAAGAAGTTC  250

seq1  TGGAGCTCAGAGGATTGCTAGAGAGTGGTTGGTTTTCATTCTATACTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTCAGAGGATTGCTAGAGAGTGGTTGGTTTTCATTCTATACTGAG  300

seq1  ACCCAAAGAAGGAAATGATAGGGATTTCTTGCAAAACGAAAAGGGAGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAAGAAGGAAATGATAGGGATTTCTTGCAAAACGAAAAGGGAGGAT  350

seq1  ATATATATAATCTGCCTACAATTTAAGCAGAGGAATGACAATAATCTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATAATCTGCCTACAATTTAAGCAGAGGAATGACAATAATCTGAT  400

seq1  TTGCATTTATAAAGATAATGTGGAAATTCTAGACTTGGAGTGTCTGGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTATAAAGATAATGTGGAAATTCTAGACTTGGAGTGTCTGGGTC  450

seq1  TTTTTGAAAGACAAGCCAGGGTGGAACCAAGATAATTTTTAGGGTTTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAAGACAAGCCAGGGTGGAACCAAGATAATTTTTAGGGTTTGGT  500

seq1  CTCAAGAAACTTGGTGGATGGAGCAACATCTGAGAAACATTCTTCCCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAAACTTGGTGGATGGAGCAACATCTGAGAAACATTCTTCCCTTG  550

seq1  ATAGCCCTGGTAATACAGTGTAGAGTTTGGGGGTGGCTAGAAACAAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCCTGGTAATACAGTGTAGAGTTTGGGGGTGGCTAGAAACAAAGCT  600

seq1  GGAGAAGGAAAAAAAAATGCTTAAATCACACGACGTTTTGGATTTTATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGGAAAAAAAAATGCTTAAATCACACGACGTTTTGGATTTTATCC  650

seq1  TCTAAGTCTATAATTAAAGGAACAGATGTAGATACTTGTATTTTTTACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTCTATAATTAAAGGAACAGATGTAGATACTTGTATTTTTTACAG  700

seq1  AAAAGGAACTGGGGCAATGCAAGCAAGGGTCTGTTCTCCTTGCTGCCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAACTGGGGCAATGCAAGCAAGGGTCTGTTCTCCTTGCTGCCTCC  750

seq1  TTTCCTCCTATTTTGGGATGCCATTCATTTTTATTTAACCTTGAAGGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCTATTTTGGGATGCCATTCATTTTTATTTAACCTTGAAGGCCT  800

seq1  ACGCTCTCCCTTTGGGTTGCTAAAGATCCACAGAAAACTCCATCCCCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTCTCCCTTTGGGTTGCTAAAGATCCACAGAAAACTCCATCCCCTGT  850

seq1  GAACTTCAGTCAAGCCTGACTGTACCTGTAACACAAGCCGCCTCCTCCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAACTTCAGTCAAGCCTGACTGTACCTGTAACACAAGCCGCCTCCTCTTC  900

seq1  CTCC  904
      ||||
seq2  CTCC  904

seq1: chr10_110850387_110850540
seq2: B6Ng01-017I07.g_73_226 (reverse)

seq1  TCACCCATCCCCCACTCCTACTTCCTCACCTGTGTTTACAACAGTCAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCATCCCCCACTCCTACTTCCTCACCTGTGTTTACAACAGTCAGAC  50

seq1  TGAGTTAGGAAAGGGAGCAGTGGAGAAAATGTAAGCACAAGGGAAGGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTAGGAAAGGGAGCAGTGGAGAAAATGTAAGCACAAGGGAAGGTAC  100

seq1  AAACATGCCTATATGAATTATTTGGGGGAACTAGATGCCAGCAGCATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGCCTATATGAATTATTTGGGGGAACTAGATGCCAGCAGCATCCA  150

seq1  GAGA  154
      ||||
seq2  GAGA  154