BAC Information

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BAC

Clone NameB6Ng01-018A18
Chromosome10 (Build37)
Map Location 31,525,279 - 31,525,861
singlet/doubletsinglet
Overlap geneTcba1
Upstream geneHey2, LOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294, Ibrdc1, LOC666055, LOC667752, LOC100040638
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018A18.bB6Ng01-018A18.g
ACCDH851554DH851555
length5771,140
definitionDH851554|Mus musculus domesticus DNA, BAC clone: B6Ng01-018A18, 5' end.DH851555|Mus musculus domesticus DNA, BAC clone: B6Ng01-018A18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tttgttcagctctgagccccattttttttctaatttttttattaggtatt
ttcctcataaaaatttttttgatgaaatggattacaaaataggtgacttg
aaactctactcatctttgaatggtcttctcagatgtcttttttatgtgga
atatgggaaaccccttatatttcctatgtctcaagctgagccttatgcca
aatcctgtgatatgtcattaatgattgagaaagagaagcaagaattacca
tttgctgtttgagaacagtattgttgcagaatatcagtattgcatttcag
ttctagttccaacaataatcctcaaggaaagaaggcaactggttacatct
ttactttcccaggactgacaatgtttctgctttgaagttttatagaaact
tcagtttcaattttaagtatctgaatcagactatttaagacatgatttgt
ccaaagaggcttcatgttccaatggtggggaccaaacttgggacgtgtac
aagagtcctcccactgagtctcaccatcgaccttcctgttgtcattatat
tggttggtttgggttgggtttggttat
gaattctttgtttagctctgcataccatttttttttaaatagggttattt
ggttttctcgagaccaacttcttgagttctttatacatattggatattag
caccctattggatgtagagttcgtaaagatattttccccatctgttggcg
gctttttggtcttattgacaatgtcctttgccttacagaagctttgtaat
tttatgaggtcccatttgtggattcttgatcttacagcacaagccactgc
tgttctgttcaagaattttttcccctgtgtccatatcttcgaggctcttc
cctactttctcctctctaagtttcagtgttcctggttttatgtggagttc
cttgatccacttagacttgagctttgtacaaggagataagaatggatcaa
atcccatccttctacctgctaactgccagtttagctagcactgtttgttg
aaaatgctgtgttttttccactggatggttttagctgccttgtcaaagat
caagtgaccataggtgtgtgggttcatttctgggtcttcaattctatttc
attgatctacctgtctgtcactgtaccagtaccatgcagtttttaatcac
aatttctctgtagtacagcttgaggtaatacaggcatggtgattccacca
gaggatcttctattgttgagagtagttcttctatcctaggtattttgtta
ttccagatgaatatgtaacttgcccttttcttaattctgtgaagaactga
gtagaattttgatggggattgcattgaatctgtagattgcttttgggcaa
gatagccatttttactatattgatcctgccaatccatgagcatgggagat
ctttccatcttctggaatcttctttgatttctttctttagagacttgaat
tcttatcatacagattttctctccttagaagtcacaccaaggtatttaat
attatttgtgactttgtgaaggttttatttccctattcattctcagcctg
tttatactttgtgaagagaaaagccattgattgtttgagttattttatat
atcacttactgccttgaagcctttttacaggttaaagagtctctgtgtga
aattttggggcaaccttaaaatacactacccaatacaccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_31525279_31525861
seq2: B6Ng01-018A18.b_47_629 (reverse)

seq1  ATAACCAAACCCAACCCAAACCAACCAATATAATGACAACAGGAAGGTCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAAACCCAACCCAAACCAACCAATATAATGACAACAGGAAGGTCG  50

seq1  ATGGTGAGACTCAGTGGGAGGACTCTTGTACACGTCCCAAGTTTGGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGAGACTCAGTGGGAGGACTCTTGTACACGTCCCAAGTTTGGTCCC  100

seq1  CACCATTGGAACATGAAGCCTCTTTGGACAAATCATGTCTTAAATAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTGGAACATGAAGCCTCTTTGGACAAATCATGTCTTAAATAGTCT  150

seq1  GATTCAGATACTTAAAATTGAAACTGAAGTTTCTATAAAACTTCAAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAGATACTTAAAATTGAAACTGAAGTTTCTATAAAACTTCAAAGCA  200

seq1  GAAACATTGTCAGTCCTGGGAAAGTAAAGATGTAACCAGTTGCCTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATTGTCAGTCCTGGGAAAGTAAAGATGTAACCAGTTGCCTTCTTT  250

seq1  CCTTGAGGATTATTGTTGGAACTAGAACTGAAATGCAATACTGATATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGGATTATTGTTGGAACTAGAACTGAAATGCAATACTGATATTCT  300

seq1  GCAACAATACTGTTCTCAAACAGCAAATGGTAATTCTTGCTTCTCTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAATACTGTTCTCAAACAGCAAATGGTAATTCTTGCTTCTCTTTCT  350

seq1  CAATCATTAATGACATATCACAGGATTTGGCATAAGGCTCAGCTTGAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATTAATGACATATCACAGGATTTGGCATAAGGCTCAGCTTGAGAC  400

seq1  ATAGGAAATATAAGGGGTTTCCCATATTCCACATAAAAAAGACATCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAATATAAGGGGTTTCCCATATTCCACATAAAAAAGACATCTGAG  450

seq1  AAGACCATTCAAAGATGAGTAGAGTTTCAAGTCACCTATTTTGTAATCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCATTCAAAGATGAGTAGAGTTTCAAGTCACCTATTTTGTAATCCA  500

seq1  TTTCATCAAAAAAATTTTTATGAGGAAAATACCTAATAAAAAAATTAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCAAAAAAATTTTTATGAGGAAAATACCTAATAAAAAAATTAGAA  550

seq1  AAAAAATGGGGCTCAGAGCTGAACAAAGAATTC  583
      |||||||||||||||||||||||||||||||||
seq2  AAAAAATGGGGCTCAGAGCTGAACAAAGAATTC  583